RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 ANKRD46Q86W74 232 aa25.46■■□□□ 1.67
SSBP4-202ENST00000348495 ZC3H7AQ8IWR0 971 aaKnown RBP25.46■■□□□ 1.67
SSBP4-202ENST00000348495 TGIF2Q9GZN2 237 aa25.46■■□□□ 1.67
SSBP4-202ENST00000348495 BTNL2Q9UIR0 455 aa25.46■■□□□ 1.67
SSBP4-202ENST00000348495 ERVK-11Q9UQG0 969 aa25.46■■□□□ 1.67
SSBP4-202ENST00000348495 MRPS33Q9Y291 106 aaKnown RBP25.46■■□□□ 1.67
SSBP4-202ENST00000348495 CROCCQ5TZA2 2017 aa25.46■■□□□ 1.67
SSBP4-202ENST00000348495 MRASO14807 208 aa25.46■■□□□ 1.67
SSBP4-202ENST00000348495 AIM2O14862 343 aa25.46■■□□□ 1.67
SSBP4-202ENST00000348495 PDPK1O15530 556 aa25.46■■□□□ 1.67
SSBP4-202ENST00000348495 FGF17O60258 216 aa25.46■■□□□ 1.67
SSBP4-202ENST00000348495 JRKO75564 520 aa25.46■■□□□ 1.67
SSBP4-202ENST00000348495 STK17BO94768 372 aa25.46■■□□□ 1.67
SSBP4-202ENST00000348495 ERV3-1Q14264 604 aa25.46■■□□□ 1.67
SSBP4-202ENST00000348495 LCN10Q6JVE6 187 aa25.46■■□□□ 1.67
SSBP4-202ENST00000348495 ANKRD9Q96BM1 317 aaPredicted RBP25.46■■□□□ 1.67
SSBP4-202ENST00000348495 MIEF2Q96C03 454 aa25.46■■□□□ 1.67
SSBP4-202ENST00000348495 CCDC115Q96NT0 180 aa25.46■■□□□ 1.67
SSBP4-202ENST00000348495 RMND5AQ9H871 391 aa25.46■■□□□ 1.67
SSBP4-202ENST00000348495 AKIRIN1Q9H9L7 192 aaPredicted RBP25.46■■□□□ 1.67
SSBP4-202ENST00000348495 CTSFQ9UBX1 484 aa25.46■■□□□ 1.67
SSBP4-202ENST00000348495 CLDN16Q9Y5I7 305 aa25.46■■□□□ 1.67
SSBP4-202ENST00000348495 MYO1GB0I1T2 1018 aa25.45■■□□□ 1.66
SSBP4-202ENST00000348495 B4GALT2O60909 372 aa25.45■■□□□ 1.66
SSBP4-202ENST00000348495 ERAL1O75616 437 aaKnown RBP25.45■■□□□ 1.66
SSBP4-202ENST00000348495 ATP5HO75947 161 aa25.45■■□□□ 1.66
SSBP4-202ENST00000348495 DLGAP3O95886 979 aa25.45■■□□□ 1.66
SSBP4-202ENST00000348495 FOLH1Q04609 750 aa25.45■■□□□ 1.66
SSBP4-202ENST00000348495 TMEM164Q5U3C3 297 aa25.45■■□□□ 1.66
SSBP4-202ENST00000348495 OVCH1Q7RTY7 1134 aa25.45■■□□□ 1.66
SSBP4-202ENST00000348495 SCUBE1Q8IWY4 988 aa25.45■■□□□ 1.66
SSBP4-202ENST00000348495 CLECL1Q8IZS7 167 aa25.45■■□□□ 1.66
SSBP4-202ENST00000348495 VPS37AQ8NEZ2 397 aa25.45■■□□□ 1.66
SSBP4-202ENST00000348495 OR4K14Q8NGD5 310 aa25.45■■□□□ 1.66
SSBP4-202ENST00000348495 SLC7A6OSQ96CW6 309 aaPredicted RBP25.45■■□□□ 1.66
SSBP4-202ENST00000348495 FAM122AQ96E09 287 aa25.45■■□□□ 1.66
SSBP4-202ENST00000348495 YIPF2Q9BWQ6 316 aa25.45■■□□□ 1.66
SSBP4-202ENST00000348495 ACSS1Q9NUB1 689 aaPredicted RBP25.45■■□□□ 1.66
SSBP4-202ENST00000348495 FOXJ2Q9P0K8 574 aa25.45■■□□□ 1.66
SSBP4-202ENST00000348495 ZNF282Q9UDV7 671 aaPredicted RBP25.45■■□□□ 1.66
SSBP4-202ENST00000348495 A0A1W2PS29 197 aa25.44■■□□□ 1.66
SSBP4-202ENST00000348495 CTNSO60931 367 aa25.44■■□□□ 1.66
SSBP4-202ENST00000348495 TNFSF15O95150 251 aa25.44■■□□□ 1.66
SSBP4-202ENST00000348495 GPR75O95800 540 aa25.44■■□□□ 1.66
SSBP4-202ENST00000348495 EFNA1P20827 205 aaPredicted RBP25.44■■□□□ 1.66
SSBP4-202ENST00000348495 HSD17B7P56937 341 aa25.44■■□□□ 1.66
SSBP4-202ENST00000348495 LRRC74AQ0VAA2 488 aa25.44■■□□□ 1.66
SSBP4-202ENST00000348495 ZNF750Q32MQ0 723 aa25.44■■□□□ 1.66
SSBP4-202ENST00000348495 PCYOX1LQ8NBM8 494 aa25.44■■□□□ 1.66
SSBP4-202ENST00000348495 ITCHQ96J02 903 aa25.44■■□□□ 1.66
SSBP4-202ENST00000348495 INPP5KQ9BT40 448 aa25.44■■□□□ 1.66
SSBP4-202ENST00000348495 SLC26A1Q9H2B4 701 aa25.44■■□□□ 1.66
SSBP4-202ENST00000348495 POLR1BQ9H9Y6 1135 aa25.44■■□□□ 1.66
SSBP4-202ENST00000348495 SLAMF8Q9P0V8 285 aa25.44■■□□□ 1.66
SSBP4-202ENST00000348495 SCN2AQ99250 2005 aa25.44■■□□□ 1.66
SSBP4-202ENST00000348495 NUP210LQ5VU65 1888 aa25.44■■□□□ 1.66
SSBP4-202ENST00000348495 B2RBV5 119 aa25.43■■□□□ 1.66
SSBP4-202ENST00000348495 CLDN4O14493 209 aa25.43■■□□□ 1.66
SSBP4-202ENST00000348495 HNRNPCL1O60812 293 aaKnown RBP25.43■■□□□ 1.66
SSBP4-202ENST00000348495 LDB3O75112 727 aa25.43■■□□□ 1.66
SSBP4-202ENST00000348495 CDC123O75794 336 aaPredicted RBP25.43■■□□□ 1.66
SSBP4-202ENST00000348495 KLK3P07288 261 aaPredicted RBP25.43■■□□□ 1.66
SSBP4-202ENST00000348495 ATXN8OSP0DMR3 200 aa25.43■■□□□ 1.66
SSBP4-202ENST00000348495 AGXTP21549 392 aa25.43■■□□□ 1.66
SSBP4-202ENST00000348495 PPP2R1BP30154 601 aa25.43■■□□□ 1.66
SSBP4-202ENST00000348495 CPOXP36551 454 aa25.43■■□□□ 1.66
SSBP4-202ENST00000348495 PLA2G5P39877 138 aa25.43■■□□□ 1.66
SSBP4-202ENST00000348495 NUDT2P50583 147 aa25.43■■□□□ 1.66
SSBP4-202ENST00000348495 IGLV3-21P80748 117 aaPredicted RBP25.43■■□□□ 1.66
SSBP4-202ENST00000348495 DUSP2Q05923 314 aa25.43■■□□□ 1.66
SSBP4-202ENST00000348495 MLC1Q15049 377 aa25.43■■□□□ 1.66
SSBP4-202ENST00000348495 VWA2Q5GFL6 755 aa25.43■■□□□ 1.66
SSBP4-202ENST00000348495 DLEU7Q6UYE1 221 aa25.43■■□□□ 1.66
SSBP4-202ENST00000348495 HACD2Q6Y1H2 254 aa25.43■■□□□ 1.66
SSBP4-202ENST00000348495 RINLQ6ZS11 566 aa25.43■■□□□ 1.66
SSBP4-202ENST00000348495 OR4N5Q8IXE1 308 aa25.43■■□□□ 1.66
SSBP4-202ENST00000348495 SAMD14Q8IZD0 417 aaPredicted RBP25.43■■□□□ 1.66
SSBP4-202ENST00000348495 GALNT6Q8NCL4 622 aa25.43■■□□□ 1.66
SSBP4-202ENST00000348495 SUN3Q8TAQ9 357 aa25.43■■□□□ 1.66
SSBP4-202ENST00000348495 FKBP10Q96AY3 582 aa25.43■■□□□ 1.66
SSBP4-202ENST00000348495 AMDHD1Q96NU7 426 aa25.43■■□□□ 1.66
SSBP4-202ENST00000348495 PRTFDC1Q9NRG1 225 aa25.43■■□□□ 1.66
SSBP4-202ENST00000348495 ENTPD4Q9Y227 616 aa25.43■■□□□ 1.66
SSBP4-202ENST00000348495 ZNF780BQ9Y6R6 833 aa25.43■■□□□ 1.66
SSBP4-202ENST00000348495 ALBP02768 609 aa25.43■■□□□ 1.66
SSBP4-202ENST00000348495 PTPN6P29350 595 aa25.43■■□□□ 1.66
SSBP4-202ENST00000348495 XKP51811 444 aa25.43■■□□□ 1.66
SSBP4-202ENST00000348495 RBM15BQ8NDT2 890 aaKnown RBP25.43■■□□□ 1.66
SSBP4-202ENST00000348495 GOT1L1Q8NHS2 421 aaPredicted RBP25.43■■□□□ 1.66
SSBP4-202ENST00000348495 ZBED6CLQ96FA7 236 aaPredicted RBP25.43■■□□□ 1.66
SSBP4-202ENST00000348495 IFT80Q9P2H3 777 aaPredicted RBP25.43■■□□□ 1.66
SSBP4-202ENST00000348495 TEX51A0A1B0GUA7 166 aa25.42■■□□□ 1.66
SSBP4-202ENST00000348495 A0A1W2PRB8 838 aa25.42■■□□□ 1.66
SSBP4-202ENST00000348495 ERICH4A6NGS2 130 aa25.42■■□□□ 1.66
SSBP4-202ENST00000348495 VSTM2BA6NLU5 285 aa25.42■■□□□ 1.66
SSBP4-202ENST00000348495 TGFBR3LH3BV60 316 aa25.42■■□□□ 1.66
SSBP4-202ENST00000348495 FXYD1O00168 92 aa25.42■■□□□ 1.66
SSBP4-202ENST00000348495 NVLO15381 856 aaKnown RBP25.42■■□□□ 1.66
SSBP4-202ENST00000348495 C8orf89P0DMQ9 161 aa25.42■■□□□ 1.66
SSBP4-202ENST00000348495 HOXB9P17482 250 aaPredicted RBP25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms