RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 IFT80Q9P2H3 777 aaPredicted RBP17.87■□□□□ 0.45
CHMP4A-201ENST00000347519 TAGLN3Q9UI15 199 aa17.87■□□□□ 0.45
CHMP4A-201ENST00000347519 MAPRE3Q9UPY8 281 aa17.87■□□□□ 0.45
CHMP4A-201ENST00000347519 NCOR2Q9Y618 2525 aa17.86■□□□□ 0.45
CHMP4A-201ENST00000347519 NUP214P35658 2090 aaPredicted RBP17.86■□□□□ 0.45
CHMP4A-201ENST00000347519 IGLV3-12A0A075B6K2 115 aa17.86■□□□□ 0.45
CHMP4A-201ENST00000347519 A0A1W2PP18 115 aa17.86■□□□□ 0.45
CHMP4A-201ENST00000347519 IL6P05231 212 aa17.86■□□□□ 0.45
CHMP4A-201ENST00000347519 SLC5A2P31639 672 aa17.86■□□□□ 0.45
CHMP4A-201ENST00000347519 RPL3P39023 403 aaKnown RBP17.86■□□□□ 0.45
CHMP4A-201ENST00000347519 FEN1P39748 380 aaKnown RBP17.86■□□□□ 0.45
CHMP4A-201ENST00000347519 FOLH1Q04609 750 aa17.86■□□□□ 0.45
CHMP4A-201ENST00000347519 FOXC1Q12948 553 aa17.86■□□□□ 0.45
CHMP4A-201ENST00000347519 MLIPQ5VWP3 458 aa17.86■□□□□ 0.45
CHMP4A-201ENST00000347519 REP15Q6BDI9 236 aa17.86■□□□□ 0.45
CHMP4A-201ENST00000347519 ZNF517Q6ZMY9 492 aaPredicted RBP17.86■□□□□ 0.45
CHMP4A-201ENST00000347519 SHISA6Q6ZSJ9 500 aa17.86■□□□□ 0.45
CHMP4A-201ENST00000347519 FBXO27Q8NI29 283 aa17.86■□□□□ 0.45
CHMP4A-201ENST00000347519 STT3BQ8TCJ2 826 aa17.86■□□□□ 0.45
CHMP4A-201ENST00000347519 STARD8Q92502 1023 aa17.86■□□□□ 0.45
CHMP4A-201ENST00000347519 MIEF2Q96C03 454 aa17.86■□□□□ 0.45
CHMP4A-201ENST00000347519 RCN3Q96D15 328 aa17.86■□□□□ 0.45
CHMP4A-201ENST00000347519 ZNF764Q96H86 408 aaPredicted RBP17.86■□□□□ 0.45
CHMP4A-201ENST00000347519 NSL1Q96IY1 281 aa17.86■□□□□ 0.45
CHMP4A-201ENST00000347519 OR52E6Q96RD3 313 aa17.86■□□□□ 0.45
CHMP4A-201ENST00000347519 INPP5KQ9BT40 448 aa17.86■□□□□ 0.45
CHMP4A-201ENST00000347519 BHLHE41Q9C0J9 482 aaPredicted RBP17.86■□□□□ 0.45
CHMP4A-201ENST00000347519 MKKSQ9NPJ1 570 aaPredicted RBP17.86■□□□□ 0.45
CHMP4A-201ENST00000347519 ASCL3Q9NQ33 180 aa17.86■□□□□ 0.45
CHMP4A-201ENST00000347519 SLC35C2Q9NQQ7 365 aa17.86■□□□□ 0.45
CHMP4A-201ENST00000347519 NECTIN3Q9NQS3 549 aa17.86■□□□□ 0.45
CHMP4A-201ENST00000347519 PRTFDC1Q9NRG1 225 aa17.86■□□□□ 0.45
CHMP4A-201ENST00000347519 MAP10Q9P2G4 905 aa17.86■□□□□ 0.45
CHMP4A-201ENST00000347519 KLK13Q9UKR3 277 aa17.86■□□□□ 0.45
CHMP4A-201ENST00000347519 VSTM2BA6NLU5 285 aa17.85■□□□□ 0.45
CHMP4A-201ENST00000347519 EBAG9O00559 213 aa17.85■□□□□ 0.45
CHMP4A-201ENST00000347519 NVLO15381 856 aaKnown RBP17.85■□□□□ 0.45
CHMP4A-201ENST00000347519 CFLARO15519 480 aa17.85■□□□□ 0.45
CHMP4A-201ENST00000347519 RECKO95980 971 aa17.85■□□□□ 0.45
CHMP4A-201ENST00000347519 SPINK2P20155 84 aa17.85■□□□□ 0.45
CHMP4A-201ENST00000347519 MAOAP21397 527 aa17.85■□□□□ 0.45
CHMP4A-201ENST00000347519 AGXTP21549 392 aa17.85■□□□□ 0.45
CHMP4A-201ENST00000347519 PCBP4P57723 403 aaKnown RBP17.85■□□□□ 0.45
CHMP4A-201ENST00000347519 RHAGQ02094 409 aa17.85■□□□□ 0.45
CHMP4A-201ENST00000347519 MAPRE2Q15555 327 aa17.85■□□□□ 0.45
CHMP4A-201ENST00000347519 NKG7Q16617 165 aa17.85■□□□□ 0.45
CHMP4A-201ENST00000347519 DPY19L1Q2PZI1 675 aa17.85■□□□□ 0.45
CHMP4A-201ENST00000347519 TMEM164Q5U3C3 297 aa17.85■□□□□ 0.45
CHMP4A-201ENST00000347519 FAM69BQ5VUD6 431 aa17.85■□□□□ 0.45
CHMP4A-201ENST00000347519 MRPL14Q6P1L8 145 aaKnown RBP17.85■□□□□ 0.45
CHMP4A-201ENST00000347519 C6orf15Q6UXA7 325 aaPredicted RBP17.85■□□□□ 0.45
CHMP4A-201ENST00000347519 MED25Q71SY5 747 aa17.85■□□□□ 0.45
CHMP4A-201ENST00000347519 SCUBE1Q8IWY4 988 aa17.85■□□□□ 0.45
CHMP4A-201ENST00000347519 ZNF595Q8IYB9 648 aa17.85■□□□□ 0.45
CHMP4A-201ENST00000347519 ADAMTS18Q8TE60 1221 aa17.85■□□□□ 0.45
CHMP4A-201ENST00000347519 TSPEARQ8WU66 669 aa17.85■□□□□ 0.45
CHMP4A-201ENST00000347519 TANKQ92844 425 aa17.85■□□□□ 0.45
CHMP4A-201ENST00000347519 OR1F2PQ96R84 312 aa17.85■□□□□ 0.45
CHMP4A-201ENST00000347519 PRPF18Q99633 342 aaKnown RBP17.85■□□□□ 0.45
CHMP4A-201ENST00000347519 SLC25A23Q9BV35 468 aa17.85■□□□□ 0.45
CHMP4A-201ENST00000347519 TGIF2Q9GZN2 237 aa17.85■□□□□ 0.45
CHMP4A-201ENST00000347519 SERHLQ9NQF3 203 aa17.85■□□□□ 0.45
CHMP4A-201ENST00000347519 SLAMF8Q9P0V8 285 aa17.85■□□□□ 0.45
CHMP4A-201ENST00000347519 ZNF282Q9UDV7 671 aaPredicted RBP17.85■□□□□ 0.45
CHMP4A-201ENST00000347519 CDRT15L2A8MXV6 281 aa17.84■□□□□ 0.45
CHMP4A-201ENST00000347519 MYO1GB0I1T2 1018 aa17.84■□□□□ 0.45
CHMP4A-201ENST00000347519 PDPK1O15530 556 aa17.84■□□□□ 0.45
CHMP4A-201ENST00000347519 CTNSO60931 367 aa17.84■□□□□ 0.45
CHMP4A-201ENST00000347519 GPR75O95800 540 aa17.84■□□□□ 0.45
CHMP4A-201ENST00000347519 KLK3P07288 261 aaPredicted RBP17.84■□□□□ 0.45
CHMP4A-201ENST00000347519 ZGLP1P0C6A0 271 aa17.84■□□□□ 0.45
CHMP4A-201ENST00000347519 FRKP42685 505 aaPredicted RBP17.84■□□□□ 0.45
CHMP4A-201ENST00000347519 CDKN2CP42773 168 aa17.84■□□□□ 0.45
CHMP4A-201ENST00000347519 BNIP1Q12981 228 aa17.84■□□□□ 0.45
CHMP4A-201ENST00000347519 ZNF551Q7Z340 670 aaPredicted RBP17.84■□□□□ 0.45
CHMP4A-201ENST00000347519 OR4K14Q8NGD5 310 aa17.84■□□□□ 0.45
CHMP4A-201ENST00000347519 SUN3Q8TAQ9 357 aa17.84■□□□□ 0.45
CHMP4A-201ENST00000347519 DOK4Q8TEW6 326 aa17.84■□□□□ 0.45
CHMP4A-201ENST00000347519 GTF2H4Q92759 462 aa17.84■□□□□ 0.45
CHMP4A-201ENST00000347519 TSLPQ969D9 159 aa17.84■□□□□ 0.45
CHMP4A-201ENST00000347519 CMTM5Q96DZ9 223 aa17.84■□□□□ 0.45
CHMP4A-201ENST00000347519 B3GNT4Q9C0J1 378 aa17.84■□□□□ 0.45
CHMP4A-201ENST00000347519 GLIPR2Q9H4G4 154 aa17.84■□□□□ 0.45
CHMP4A-201ENST00000347519 SOX17Q9H6I2 414 aaPredicted RBP17.84■□□□□ 0.45
CHMP4A-201ENST00000347519 PRDM9Q9NQV7 894 aa17.84■□□□□ 0.45
CHMP4A-201ENST00000347519 SLC6A13Q9NSD5 602 aa17.84■□□□□ 0.45
CHMP4A-201ENST00000347519 WASF3Q9UPY6 502 aa17.84■□□□□ 0.45
CHMP4A-201ENST00000347519 NDUFAF1Q9Y375 327 aa17.84■□□□□ 0.45
CHMP4A-201ENST00000347519 AIM2O14862 343 aa17.83■□□□□ 0.45
CHMP4A-201ENST00000347519 RRP9O43818 475 aaKnown RBP17.83■□□□□ 0.45
CHMP4A-201ENST00000347519 CPSF4O95639 269 aaKnown RBP17.83■□□□□ 0.45
CHMP4A-201ENST00000347519 C6orf47O95873 294 aa17.83■□□□□ 0.45
CHMP4A-201ENST00000347519 C1QCP02747 245 aa17.83■□□□□ 0.45
CHMP4A-201ENST00000347519 ESRRAP11474 423 aaPredicted RBP17.83■□□□□ 0.45
CHMP4A-201ENST00000347519 PPP2R1BP30154 601 aa17.83■□□□□ 0.45
CHMP4A-201ENST00000347519 XKP51811 444 aa17.83■□□□□ 0.45
CHMP4A-201ENST00000347519 SLC13A2Q13183 592 aa17.83■□□□□ 0.45
CHMP4A-201ENST00000347519 CEBPEQ15744 281 aa17.83■□□□□ 0.45
CHMP4A-201ENST00000347519 MINDY4Q4G0A6 757 aa17.83■□□□□ 0.45
CHMP4A-201ENST00000347519 MFSD4BQ5TF39 518 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms