RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 GBAP04062 536 aa12.97□□□□□ -0.33
TPM4-202ENST00000344824 PRR35P0CG20 571 aa12.97□□□□□ -0.33
TPM4-202ENST00000344824 C8orf89P0DMQ9 161 aa12.97□□□□□ -0.33
TPM4-202ENST00000344824 GSTM2P28161 218 aa12.97□□□□□ -0.33
TPM4-202ENST00000344824 PLA2G16P53816 162 aa12.97□□□□□ -0.33
TPM4-202ENST00000344824 DIO3P55073 304 aa12.97□□□□□ -0.33
TPM4-202ENST00000344824 STXBP1P61764 594 aaKnown RBP12.97□□□□□ -0.33
TPM4-202ENST00000344824 NADK2Q4G0N4 442 aa12.97□□□□□ -0.33
TPM4-202ENST00000344824 DEPDC1Q5TB30 811 aa12.97□□□□□ -0.33
TPM4-202ENST00000344824 IL23RQ5VWK5 629 aa12.97□□□□□ -0.33
TPM4-202ENST00000344824 LANCL3Q6ZV70 420 aa12.97□□□□□ -0.33
TPM4-202ENST00000344824 CHSY3Q70JA7 882 aa12.97□□□□□ -0.33
TPM4-202ENST00000344824 SPATA19Q7Z5L4 167 aa12.97□□□□□ -0.33
TPM4-202ENST00000344824 CDC26Q8NHZ8 85 aa12.97□□□□□ -0.33
TPM4-202ENST00000344824 UTP15Q8TED0 518 aaKnown RBP12.97□□□□□ -0.33
TPM4-202ENST00000344824 STON2Q8WXE9 905 aa12.97□□□□□ -0.33
TPM4-202ENST00000344824 THOC3Q96J01 351 aaKnown RBP12.97□□□□□ -0.33
TPM4-202ENST00000344824 CENPKQ9BS16 269 aa12.97□□□□□ -0.33
TPM4-202ENST00000344824 TGIF2Q9GZN2 237 aa12.97□□□□□ -0.33
TPM4-202ENST00000344824 VN1R1Q9GZP7 353 aa12.97□□□□□ -0.33
TPM4-202ENST00000344824 REXO4Q9GZR2 422 aaKnown RBP12.97□□□□□ -0.33
TPM4-202ENST00000344824 AICDAQ9GZX7 198 aa12.97□□□□□ -0.33
TPM4-202ENST00000344824 SLC22A7Q9Y694 548 aa12.97□□□□□ -0.33
TPM4-202ENST00000344824 TENM4Q6N022 2769 aa12.97□□□□□ -0.33
TPM4-202ENST00000344824 IGHV3-20A0A0C4DH32 117 aa12.96□□□□□ -0.33
TPM4-202ENST00000344824 LRIT2A6NDA9 550 aa12.96□□□□□ -0.33
TPM4-202ENST00000344824 C4orf51C9J302 202 aa12.96□□□□□ -0.33
TPM4-202ENST00000344824 PSMD12O00232 456 aaPredicted RBP12.96□□□□□ -0.33
TPM4-202ENST00000344824 PLPP1O14494 284 aa12.96□□□□□ -0.33
TPM4-202ENST00000344824 ERI3O43414 337 aaKnown RBP12.96□□□□□ -0.33
TPM4-202ENST00000344824 RRP9O43818 475 aaKnown RBP12.96□□□□□ -0.33
TPM4-202ENST00000344824 CCDC22O60826 627 aa12.96□□□□□ -0.33
TPM4-202ENST00000344824 MYO1DO94832 1006 aa12.96□□□□□ -0.33
TPM4-202ENST00000344824 SEC24DO94855 1032 aaPredicted RBP12.96□□□□□ -0.33
TPM4-202ENST00000344824 HPP00738 406 aa12.96□□□□□ -0.33
TPM4-202ENST00000344824 SERPINA6P08185 405 aa12.96□□□□□ -0.33
TPM4-202ENST00000344824 COX6A1P12074 109 aa12.96□□□□□ -0.33
TPM4-202ENST00000344824 CASRP41180 1078 aa12.96□□□□□ -0.33
TPM4-202ENST00000344824 STX1BP61266 288 aa12.96□□□□□ -0.33
TPM4-202ENST00000344824 EMX2Q04743 252 aa12.96□□□□□ -0.33
TPM4-202ENST00000344824 TBL3Q12788 808 aaKnown RBP12.96□□□□□ -0.33
TPM4-202ENST00000344824 HYAL2Q12891 473 aa12.96□□□□□ -0.33
TPM4-202ENST00000344824 MAD2L1Q13257 205 aaPredicted RBP12.96□□□□□ -0.33
TPM4-202ENST00000344824 RPS6KA2Q15349 733 aa12.96□□□□□ -0.33
TPM4-202ENST00000344824 SPIN4Q56A73 249 aa12.96□□□□□ -0.33
TPM4-202ENST00000344824 COMMD6Q7Z4G1 85 aa12.96□□□□□ -0.33
TPM4-202ENST00000344824 LIX1Q8N485 282 aa12.96□□□□□ -0.33
TPM4-202ENST00000344824 CLHC1Q8NHS4 586 aa12.96□□□□□ -0.33
TPM4-202ENST00000344824 CHTF18Q8WVB6 975 aa12.96□□□□□ -0.33
TPM4-202ENST00000344824 GAL3ST3Q96A11 431 aa12.96□□□□□ -0.33
TPM4-202ENST00000344824 RGMAQ96B86 450 aa12.96□□□□□ -0.33
TPM4-202ENST00000344824 NACC2Q96BF6 587 aa12.96□□□□□ -0.33
TPM4-202ENST00000344824 ERP27Q96DN0 273 aa12.96□□□□□ -0.33
TPM4-202ENST00000344824 LRRC37BQ96QE4 947 aa12.96□□□□□ -0.33
TPM4-202ENST00000344824 SLC6A16Q9GZN6 736 aa12.96□□□□□ -0.33
TPM4-202ENST00000344824 MYLK2Q9H1R3 596 aa12.96□□□□□ -0.33
TPM4-202ENST00000344824 COPS7BQ9H9Q2 264 aaPredicted RBP12.96□□□□□ -0.33
TPM4-202ENST00000344824 SAR1AQ9NR31 198 aa12.96□□□□□ -0.33
TPM4-202ENST00000344824 NOP53Q9NZM5 478 aaKnown RBP12.96□□□□□ -0.33
TPM4-202ENST00000344824 C19orf25Q9UFG5 118 aaPredicted RBP12.96□□□□□ -0.33
TPM4-202ENST00000344824 EIF3LQ9Y262 564 aaKnown RBP12.96□□□□□ -0.33
TPM4-202ENST00000344824 DLGAP4Q9Y2H0 992 aa12.96□□□□□ -0.33
TPM4-202ENST00000344824 COPG1Q9Y678 874 aaKnown RBP12.96□□□□□ -0.33
TPM4-202ENST00000344824 CHST10O43529 356 aa12.96□□□□□ -0.34
TPM4-202ENST00000344824 PCDH7O60245 1069 aa12.96□□□□□ -0.34
TPM4-202ENST00000344824 B4GALT2O60909 372 aa12.96□□□□□ -0.34
TPM4-202ENST00000344824 KLK1P06870 262 aa12.96□□□□□ -0.34
TPM4-202ENST00000344824 G6PDP11413 515 aa12.96□□□□□ -0.34
TPM4-202ENST00000344824 PRPH2P23942 346 aa12.96□□□□□ -0.34
TPM4-202ENST00000344824 SSR2P43308 183 aa12.96□□□□□ -0.34
TPM4-202ENST00000344824 EFNA3P52797 238 aa12.96□□□□□ -0.34
TPM4-202ENST00000344824 MLLT10P55197 1068 aa12.96□□□□□ -0.34
TPM4-202ENST00000344824 RAE1P78406 368 aaKnown RBP12.96□□□□□ -0.34
TPM4-202ENST00000344824 BTN3A2P78410 334 aa12.96□□□□□ -0.34
TPM4-202ENST00000344824 CUL3Q13618 768 aa12.96□□□□□ -0.34
TPM4-202ENST00000344824 KIAA0040Q15053 153 aa12.96□□□□□ -0.34
TPM4-202ENST00000344824 METTL21CQ5VZV1 264 aa12.96□□□□□ -0.34
TPM4-202ENST00000344824 OGFOD2Q6N063 350 aa12.96□□□□□ -0.34
TPM4-202ENST00000344824 NIPAL1Q6NVV3 410 aa12.96□□□□□ -0.34
TPM4-202ENST00000344824 NOXRED1Q6NXP6 359 aa12.96□□□□□ -0.34
TPM4-202ENST00000344824 TRIM40Q6P9F5 258 aa12.96□□□□□ -0.34
TPM4-202ENST00000344824 METTL4Q8N3J2 472 aa12.96□□□□□ -0.34
TPM4-202ENST00000344824 MS4A6EQ96DS6 147 aa12.96□□□□□ -0.34
TPM4-202ENST00000344824 TSSK3Q96PN8 268 aa12.96□□□□□ -0.34
TPM4-202ENST00000344824 SMAD5Q99717 465 aaKnown RBP12.96□□□□□ -0.34
TPM4-202ENST00000344824 LHPPQ9H008 270 aa12.96□□□□□ -0.34
TPM4-202ENST00000344824 ZNF552Q9H707 407 aaPredicted RBP12.96□□□□□ -0.34
TPM4-202ENST00000344824 AIG1Q9NVV5 245 aa12.96□□□□□ -0.34
TPM4-202ENST00000344824 AHSPQ9NZD4 102 aa12.96□□□□□ -0.34
TPM4-202ENST00000344824 BAIAP2L1Q9UHR4 511 aa12.96□□□□□ -0.34
TPM4-202ENST00000344824 PPT2Q9UMR5 302 aa12.96□□□□□ -0.34
TPM4-202ENST00000344824 PCDHGB7Q9Y5F8 929 aa12.96□□□□□ -0.34
TPM4-202ENST00000344824 IGHV1-45A0A0A0MS14 117 aa12.95□□□□□ -0.34
TPM4-202ENST00000344824 GNG14A0A1W2PPG7 69 aa12.95□□□□□ -0.34
TPM4-202ENST00000344824 TTLL8A6PVC2 850 aa12.95□□□□□ -0.34
TPM4-202ENST00000344824 C9JVG2 144 aa12.95□□□□□ -0.34
TPM4-202ENST00000344824 DNAJB6O75190 326 aa12.95□□□□□ -0.34
TPM4-202ENST00000344824 EEDO75530 441 aaKnown RBP12.95□□□□□ -0.34
TPM4-202ENST00000344824 FHP07954 510 aa12.95□□□□□ -0.34
TPM4-202ENST00000344824 CELA2AP08217 269 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms