RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 SPPL2CQ8IUH8 684 aa16.38■□□□□ 0.21
CLDN4-201ENST00000340958 GPR135Q8IZ08 494 aa16.38■□□□□ 0.21
CLDN4-201ENST00000340958 OR5AK3PQ8NH89 298 aa16.38■□□□□ 0.21
CLDN4-201ENST00000340958 GOT1L1Q8NHS2 421 aaPredicted RBP16.38■□□□□ 0.21
CLDN4-201ENST00000340958 ZNF764Q96H86 408 aaPredicted RBP16.38■□□□□ 0.21
CLDN4-201ENST00000340958 ZNF583Q96ND8 569 aa16.38■□□□□ 0.21
CLDN4-201ENST00000340958 SPRTNQ9H040 489 aaPredicted RBP16.38■□□□□ 0.21
CLDN4-201ENST00000340958 RPF2Q9H7B2 306 aaKnown RBP16.38■□□□□ 0.21
CLDN4-201ENST00000340958 TAS2R7Q9NYW3 318 aa16.38■□□□□ 0.21
CLDN4-201ENST00000340958 USP22Q9UPT9 525 aa16.38■□□□□ 0.21
CLDN4-201ENST00000340958 PCDHB3Q9Y5E6 796 aa16.38■□□□□ 0.21
CLDN4-201ENST00000340958 CROCCQ5TZA2 2017 aa16.38■□□□□ 0.21
CLDN4-201ENST00000340958 ELOVL7A1L3X0 281 aa16.38■□□□□ 0.21
CLDN4-201ENST00000340958 WASHC1A8K0Z3 465 aa16.38■□□□□ 0.21
CLDN4-201ENST00000340958 ARPC2O15144 300 aa16.38■□□□□ 0.21
CLDN4-201ENST00000340958 CASC3O15234 703 aaKnown RBP16.38■□□□□ 0.21
CLDN4-201ENST00000340958 RDH16O75452 317 aa16.38■□□□□ 0.21
CLDN4-201ENST00000340958 C8orf89P0DMQ9 161 aa16.38■□□□□ 0.21
CLDN4-201ENST00000340958 ATXN8OSP0DMR3 200 aa16.38■□□□□ 0.21
CLDN4-201ENST00000340958 CSNK2A2P19784 350 aaPredicted RBP16.38■□□□□ 0.21
CLDN4-201ENST00000340958 FEN1P39748 380 aaKnown RBP16.38■□□□□ 0.21
CLDN4-201ENST00000340958 CRATP43155 626 aa16.38■□□□□ 0.21
CLDN4-201ENST00000340958 GRK6P43250 576 aa16.38■□□□□ 0.21
CLDN4-201ENST00000340958 AVPR1BP47901 424 aa16.38■□□□□ 0.21
CLDN4-201ENST00000340958 PCBP4P57723 403 aaKnown RBP16.38■□□□□ 0.21
CLDN4-201ENST00000340958 SESN3P58005 492 aa16.38■□□□□ 0.21
CLDN4-201ENST00000340958 OR4D2P58180 307 aa16.38■□□□□ 0.21
CLDN4-201ENST00000340958 ABHD18Q0P651 414 aa16.38■□□□□ 0.21
CLDN4-201ENST00000340958 GAB1Q13480 694 aa16.38■□□□□ 0.21
CLDN4-201ENST00000340958 GARNL3Q5VVW2 1013 aa16.38■□□□□ 0.21
CLDN4-201ENST00000340958 GLYATQ6IB77 296 aa16.38■□□□□ 0.21
CLDN4-201ENST00000340958 OR52E8Q6IFG1 317 aa16.38■□□□□ 0.21
CLDN4-201ENST00000340958 AAGABQ6PD74 315 aa16.38■□□□□ 0.21
CLDN4-201ENST00000340958 PDSS2Q86YH6 399 aa16.38■□□□□ 0.21
CLDN4-201ENST00000340958 OR5T3Q8NGG3 340 aa16.38■□□□□ 0.21
CLDN4-201ENST00000340958 FIG4Q92562 907 aa16.38■□□□□ 0.21
CLDN4-201ENST00000340958 NCLNQ969V3 563 aa16.38■□□□□ 0.21
CLDN4-201ENST00000340958 PHF12Q96QT6 1004 aa16.38■□□□□ 0.21
CLDN4-201ENST00000340958 NPLQ9BXD5 320 aaPredicted RBP16.38■□□□□ 0.21
CLDN4-201ENST00000340958 S100A14Q9HCY8 104 aa16.38■□□□□ 0.21
CLDN4-201ENST00000340958 ACSS1Q9NUB1 689 aaPredicted RBP16.38■□□□□ 0.21
CLDN4-201ENST00000340958 DNAAF2Q9NVR5 837 aaKnown RBP16.38■□□□□ 0.21
CLDN4-201ENST00000340958 ACTR3BQ9P1U1 418 aa16.38■□□□□ 0.21
CLDN4-201ENST00000340958 MAGEL2Q9UJ55 1249 aa16.38■□□□□ 0.21
CLDN4-201ENST00000340958 SERTAD3Q9UJW9 196 aa16.38■□□□□ 0.21
CLDN4-201ENST00000340958 AGRPO00253 132 aa16.37■□□□□ 0.21
CLDN4-201ENST00000340958 SLC30A4O14863 429 aa16.37■□□□□ 0.21
CLDN4-201ENST00000340958 TOX3O15405 576 aaPredicted RBP16.37■□□□□ 0.21
CLDN4-201ENST00000340958 KRT75O95678 551 aa16.37■□□□□ 0.21
CLDN4-201ENST00000340958 HOXB9P17482 250 aaPredicted RBP16.37■□□□□ 0.21
CLDN4-201ENST00000340958 NELFEP18615 380 aaKnown RBP16.37■□□□□ 0.21
CLDN4-201ENST00000340958 UQCRC2P22695 453 aa16.37■□□□□ 0.21
CLDN4-201ENST00000340958 MPIP34949 423 aa16.37■□□□□ 0.21
CLDN4-201ENST00000340958 SIM1P81133 766 aaPredicted RBP16.37■□□□□ 0.21
CLDN4-201ENST00000340958 SHC2P98077 582 aa16.37■□□□□ 0.21
CLDN4-201ENST00000340958 FAM214AQ32MH5 1076 aa16.37■□□□□ 0.21
CLDN4-201ENST00000340958 PROX2Q3B8N5 592 aa16.37■□□□□ 0.21
CLDN4-201ENST00000340958 CCDC116Q8IYX3 515 aa16.37■□□□□ 0.21
CLDN4-201ENST00000340958 D2HGDHQ8N465 521 aa16.37■□□□□ 0.21
CLDN4-201ENST00000340958 RHBDD1Q8TEB9 315 aa16.37■□□□□ 0.21
CLDN4-201ENST00000340958 ZFP90Q8TF47 636 aa16.37■□□□□ 0.21
CLDN4-201ENST00000340958 MMABQ96EY8 250 aaPredicted RBP16.37■□□□□ 0.21
CLDN4-201ENST00000340958 CNDP2Q96KP4 475 aaKnown RBP16.37■□□□□ 0.21
CLDN4-201ENST00000340958 DPYSL5Q9BPU6 564 aa16.37■□□□□ 0.21
CLDN4-201ENST00000340958 TACO1Q9BSH4 297 aaKnown RBP16.37■□□□□ 0.21
CLDN4-201ENST00000340958 ZNF768Q9H5H4 540 aaKnown RBP16.37■□□□□ 0.21
CLDN4-201ENST00000340958 SLAMF7Q9NQ25 335 aa16.37■□□□□ 0.21
CLDN4-201ENST00000340958 DLL3Q9NYJ7 618 aa16.37■□□□□ 0.21
CLDN4-201ENST00000340958 KCMF1Q9P0J7 381 aa16.37■□□□□ 0.21
CLDN4-201ENST00000340958 NDOR1Q9UHB4 597 aa16.37■□□□□ 0.21
CLDN4-201ENST00000340958 ACSL6Q9UKU0 697 aa16.37■□□□□ 0.21
CLDN4-201ENST00000340958 ANGPTL2Q9UKU9 493 aa16.37■□□□□ 0.21
CLDN4-201ENST00000340958 ERVK-11Q9UQG0 969 aa16.37■□□□□ 0.21
CLDN4-201ENST00000340958 SCN3AQ9NY46 2000 aa16.37■□□□□ 0.21
CLDN4-201ENST00000340958 CNOT1A5YKK6 2376 aaKnown RBP16.36■□□□□ 0.21
CLDN4-201ENST00000340958 RNF103-CHMP3A0A140T963 221 aa16.36■□□□□ 0.21
CLDN4-201ENST00000340958 A0A1W2PQM1 296 aa16.36■□□□□ 0.21
CLDN4-201ENST00000340958 FAM220BPB1ANY3 271 aa16.36■□□□□ 0.21
CLDN4-201ENST00000340958 DNAJB6O75190 326 aa16.36■□□□□ 0.21
CLDN4-201ENST00000340958 LDOC1O95751 146 aaPredicted RBP16.36■□□□□ 0.21
CLDN4-201ENST00000340958 GABRA4P48169 554 aa16.36■□□□□ 0.21
CLDN4-201ENST00000340958 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.36■□□□□ 0.21
CLDN4-201ENST00000340958 SERPINA11Q86U17 422 aa16.36■□□□□ 0.21
CLDN4-201ENST00000340958 PTRH1Q86Y79 214 aaKnown RBP16.36■□□□□ 0.21
CLDN4-201ENST00000340958 CA13Q8N1Q1 262 aa16.36■□□□□ 0.21
CLDN4-201ENST00000340958 OR4K14Q8NGD5 310 aa16.36■□□□□ 0.21
CLDN4-201ENST00000340958 OR4D9Q8NGE8 314 aa16.36■□□□□ 0.21
CLDN4-201ENST00000340958 MAGED4Q96JG8 741 aa16.36■□□□□ 0.21
CLDN4-201ENST00000340958 SLC41A2Q96JW4 573 aa16.36■□□□□ 0.21
CLDN4-201ENST00000340958 NSMCE2Q96MF7 247 aa16.36■□□□□ 0.21
CLDN4-201ENST00000340958 GFM1Q96RP9 751 aaKnown RBP16.36■□□□□ 0.21
CLDN4-201ENST00000340958 CSF3RQ99062 836 aa16.36■□□□□ 0.21
CLDN4-201ENST00000340958 RAD21L1Q9H4I0 556 aa16.36■□□□□ 0.21
CLDN4-201ENST00000340958 SEMA3GQ9NS98 782 aa16.36■□□□□ 0.21
CLDN4-201ENST00000340958 NKX1-2Q9UD57 310 aaPredicted RBP16.36■□□□□ 0.21
CLDN4-201ENST00000340958 MAP4K5Q9Y4K4 846 aa16.36■□□□□ 0.21
CLDN4-201ENST00000340958 ZNF883P0CG24 379 aa16.35■□□□□ 0.21
CLDN4-201ENST00000340958 FOLR1P15328 257 aa16.35■□□□□ 0.21
CLDN4-201ENST00000340958 GPX2P18283 190 aa16.35■□□□□ 0.21
CLDN4-201ENST00000340958 ATP6V1B2P21281 511 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms