RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 GEMIN6Q8WXD5 167 aaKnown RBP23.21■■□□□ 1.31
SOX1-201ENST00000330949 SHARPINQ9H0F6 387 aa23.21■■□□□ 1.31
SOX1-201ENST00000330949 HDHD2Q9H0R4 259 aa23.21■■□□□ 1.31
SOX1-201ENST00000330949 NMNAT1Q9HAN9 279 aaPredicted RBP23.21■■□□□ 1.31
SOX1-201ENST00000330949 IFT46Q9NQC8 304 aa23.21■■□□□ 1.31
SOX1-201ENST00000330949 KIF25Q9UIL4 384 aa23.21■■□□□ 1.31
SOX1-201ENST00000330949 A0A1W2PQH9 124 aa23.2■■□□□ 1.3
SOX1-201ENST00000330949 hCG_1807616A0A1W2PRN6 198 aa23.2■■□□□ 1.3
SOX1-201ENST00000330949 H7C0S8 307 aa23.2■■□□□ 1.3
SOX1-201ENST00000330949 CHRM5P08912 532 aaPredicted RBP23.2■■□□□ 1.3
SOX1-201ENST00000330949 IRS1P35568 1242 aa23.2■■□□□ 1.3
SOX1-201ENST00000330949 GSTM5P46439 218 aa23.2■■□□□ 1.3
SOX1-201ENST00000330949 BDKRB1P46663 353 aa23.2■■□□□ 1.3
SOX1-201ENST00000330949 LRRC32Q14392 662 aa23.2■■□□□ 1.3
SOX1-201ENST00000330949 ZMYND11Q15326 602 aa23.2■■□□□ 1.3
SOX1-201ENST00000330949 QSOX2Q6ZRP7 698 aa23.2■■□□□ 1.3
SOX1-201ENST00000330949 PTP4A1Q93096 173 aa23.2■■□□□ 1.3
SOX1-201ENST00000330949 NXPE2Q96DL1 559 aa23.2■■□□□ 1.3
SOX1-201ENST00000330949 OTUB1Q96FW1 271 aaPredicted RBP23.2■■□□□ 1.3
SOX1-201ENST00000330949 SMIM14Q96QK8 99 aa23.2■■□□□ 1.3
SOX1-201ENST00000330949 EBPLQ9BY08 206 aa23.2■■□□□ 1.3
SOX1-201ENST00000330949 SLCO1C1Q9NYB5 712 aa23.2■■□□□ 1.3
SOX1-201ENST00000330949 ACSM4P0C7M7 580 aa23.2■■□□□ 1.3
SOX1-201ENST00000330949 ZNF865P0CJ78 1059 aaPredicted RBP23.2■■□□□ 1.3
SOX1-201ENST00000330949 ATF6P18850 670 aa23.2■■□□□ 1.3
SOX1-201ENST00000330949 CD52P31358 61 aa23.2■■□□□ 1.3
SOX1-201ENST00000330949 PUDPQ08623 228 aa23.2■■□□□ 1.3
SOX1-201ENST00000330949 RBBP4Q09028 425 aa23.2■■□□□ 1.3
SOX1-201ENST00000330949 ATAT1Q5SQI0 421 aa23.2■■□□□ 1.3
SOX1-201ENST00000330949 MIB1Q86YT6 1006 aa23.2■■□□□ 1.3
SOX1-201ENST00000330949 TAGAPQ8N103 731 aa23.2■■□□□ 1.3
SOX1-201ENST00000330949 NAGSQ8N159 534 aa23.2■■□□□ 1.3
SOX1-201ENST00000330949 OR8J1Q8NGP2 316 aa23.2■■□□□ 1.3
SOX1-201ENST00000330949 WDPCPO95876 746 aa23.19■■□□□ 1.3
SOX1-201ENST00000330949 ACLYP53396 1101 aa23.19■■□□□ 1.3
SOX1-201ENST00000330949 RPS25P62851 125 aaKnown RBP23.19■■□□□ 1.3
SOX1-201ENST00000330949 ZNF33BQ06732 778 aa23.19■■□□□ 1.3
SOX1-201ENST00000330949 GGTA1PQ4G0N0 100 aa23.19■■□□□ 1.3
SOX1-201ENST00000330949 SLC9A6Q92581 669 aa23.19■■□□□ 1.3
SOX1-201ENST00000330949 B3GALT6Q96L58 329 aa23.19■■□□□ 1.3
SOX1-201ENST00000330949 SLC6A18Q96N87 628 aa23.19■■□□□ 1.3
SOX1-201ENST00000330949 PDFQ9HBH1 243 aa23.19■■□□□ 1.3
SOX1-201ENST00000330949 WASH6PQ9NQA3 447 aa23.19■■□□□ 1.3
SOX1-201ENST00000330949 ACSL5Q9ULC5 683 aa23.19■■□□□ 1.3
SOX1-201ENST00000330949 YARS2Q9Y2Z4 477 aaKnown RBP23.19■■□□□ 1.3
SOX1-201ENST00000330949 A0A1B0GVI7 797 aa23.19■■□□□ 1.3
SOX1-201ENST00000330949 PRAMEF25A6NGN4 478 aa23.19■■□□□ 1.3
SOX1-201ENST00000330949 GTPBP1O00178 669 aaKnown RBP23.19■■□□□ 1.3
SOX1-201ENST00000330949 PCDH7O60245 1069 aa23.19■■□□□ 1.3
SOX1-201ENST00000330949 BPIP17213 487 aa23.19■■□□□ 1.3
SOX1-201ENST00000330949 F8A1P23610 371 aa23.19■■□□□ 1.3
SOX1-201ENST00000330949 FGF9P31371 208 aaPredicted RBP23.19■■□□□ 1.3
SOX1-201ENST00000330949 ZXDBP98169 803 aa23.19■■□□□ 1.3
SOX1-201ENST00000330949 C3orf38Q5JPI3 329 aa23.19■■□□□ 1.3
SOX1-201ENST00000330949 METTL23Q86XA0 190 aa23.19■■□□□ 1.3
SOX1-201ENST00000330949 DENND1CQ8IV53 801 aa23.19■■□□□ 1.3
SOX1-201ENST00000330949 VPS37AQ8NEZ2 397 aa23.19■■□□□ 1.3
SOX1-201ENST00000330949 RPRD1AQ96P16 312 aaPredicted RBP23.19■■□□□ 1.3
SOX1-201ENST00000330949 ATF6BQ99941 703 aa23.19■■□□□ 1.3
SOX1-201ENST00000330949 SLC32A1Q9H598 525 aa23.19■■□□□ 1.3
SOX1-201ENST00000330949 RDH14Q9HBH5 336 aa23.19■■□□□ 1.3
SOX1-201ENST00000330949 HCN2Q9UL51 889 aa23.19■■□□□ 1.3
SOX1-201ENST00000330949 C1orf226A1L170 272 aa23.18■■□□□ 1.3
SOX1-201ENST00000330949 RAB36O95755 333 aa23.18■■□□□ 1.3
SOX1-201ENST00000330949 OSMP13725 252 aa23.18■■□□□ 1.3
SOX1-201ENST00000330949 SSTR2P30874 369 aa23.18■■□□□ 1.3
SOX1-201ENST00000330949 AVPR1BP47901 424 aa23.18■■□□□ 1.3
SOX1-201ENST00000330949 MRPS6P82932 125 aaKnown RBP23.18■■□□□ 1.3
SOX1-201ENST00000330949 CACNG1Q06432 222 aa23.18■■□□□ 1.3
SOX1-201ENST00000330949 LINC00052Q96N35 136 aa23.18■■□□□ 1.3
SOX1-201ENST00000330949 DUSP26Q9BV47 211 aa23.18■■□□□ 1.3
SOX1-201ENST00000330949 FAM170BA6NMN3 283 aa23.18■■□□□ 1.3
SOX1-201ENST00000330949 TP53P04637 393 aaPredicted RBP23.18■■□□□ 1.3
SOX1-201ENST00000330949 NR2F6P10588 404 aa23.18■■□□□ 1.3
SOX1-201ENST00000330949 FEN1P39748 380 aaKnown RBP23.18■■□□□ 1.3
SOX1-201ENST00000330949 GANABQ14697 944 aaKnown RBP23.18■■□□□ 1.3
SOX1-201ENST00000330949 MS4A15Q8N5U1 240 aa23.18■■□□□ 1.3
SOX1-201ENST00000330949 SCPEP1Q9HB40 452 aa23.18■■□□□ 1.3
SOX1-201ENST00000330949 TAS2R7Q9NYW3 318 aa23.18■■□□□ 1.3
SOX1-201ENST00000330949 PATJQ8NI35 1801 aa23.18■■□□□ 1.3
SOX1-201ENST00000330949 GPR39O43194 453 aa23.18■■□□□ 1.3
SOX1-201ENST00000330949 HRO43593 1189 aa23.18■■□□□ 1.3
SOX1-201ENST00000330949 ADAP00813 363 aa23.18■■□□□ 1.3
SOX1-201ENST00000330949 LAMP1P11279 417 aa23.18■■□□□ 1.3
SOX1-201ENST00000330949 ZNF7P17097 686 aaPredicted RBP23.18■■□□□ 1.3
SOX1-201ENST00000330949 DGKEP52429 567 aa23.18■■□□□ 1.3
SOX1-201ENST00000330949 CTBP2P56545 445 aa23.18■■□□□ 1.3
SOX1-201ENST00000330949 WNT4P56705 351 aa23.18■■□□□ 1.3
SOX1-201ENST00000330949 BHLHB9Q6PI77 547 aa23.18■■□□□ 1.3
SOX1-201ENST00000330949 SPATA2LQ8IUW3 424 aaPredicted RBP23.18■■□□□ 1.3
SOX1-201ENST00000330949 OR6M1Q8NGM8 313 aa23.18■■□□□ 1.3
SOX1-201ENST00000330949 OR2M2Q96R28 347 aa23.18■■□□□ 1.3
SOX1-201ENST00000330949 OR51J1Q9H342 316 aa23.18■■□□□ 1.3
SOX1-201ENST00000330949 BTNL2Q9UIR0 455 aa23.18■■□□□ 1.3
SOX1-201ENST00000330949 KCNMB2Q9Y691 235 aa23.18■■□□□ 1.3
SOX1-201ENST00000330949 CBX4O00257 560 aa23.17■■□□□ 1.3
SOX1-201ENST00000330949 INSIG1O15503 277 aa23.17■■□□□ 1.3
SOX1-201ENST00000330949 SLC19A2O60779 497 aa23.17■■□□□ 1.3
SOX1-201ENST00000330949 KCNJ13O60928 360 aa23.17■■□□□ 1.3
SOX1-201ENST00000330949 EPORP19235 508 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms