RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 UCNP55089 124 aa15.54■□□□□ 0.08
PDLIM1-201ENST00000329399 STXBP1P61764 594 aaKnown RBP15.54■□□□□ 0.08
PDLIM1-201ENST00000329399 ADPRMQ3LIE5 342 aa15.54■□□□□ 0.08
PDLIM1-201ENST00000329399 SOWAHCQ53LP3 525 aaPredicted RBP15.54■□□□□ 0.08
PDLIM1-201ENST00000329399 CPTPQ5TA50 214 aa15.54■□□□□ 0.08
PDLIM1-201ENST00000329399 FRMPD2BQ6IN97 320 aa15.54■□□□□ 0.08
PDLIM1-201ENST00000329399 FBXO42Q6P3S6 717 aa15.54■□□□□ 0.08
PDLIM1-201ENST00000329399 VN1R5Q7Z5H4 357 aa15.54■□□□□ 0.08
PDLIM1-201ENST00000329399 ADCK2Q7Z695 626 aa15.54■□□□□ 0.08
PDLIM1-201ENST00000329399 BPHLQ86WA6 291 aaPredicted RBP15.54■□□□□ 0.08
PDLIM1-201ENST00000329399 PTRH1Q86Y79 214 aaKnown RBP15.54■□□□□ 0.08
PDLIM1-201ENST00000329399 MCATQ8IVS2 390 aaKnown RBP15.54■□□□□ 0.08
PDLIM1-201ENST00000329399 OR4N4Q8N0Y3 316 aa15.54■□□□□ 0.08
PDLIM1-201ENST00000329399 DTWD1Q8N5C7 304 aa15.54■□□□□ 0.08
PDLIM1-201ENST00000329399 ESX1Q8N693 406 aa15.54■□□□□ 0.08
PDLIM1-201ENST00000329399 ZNF740Q8NDX6 193 aa15.54■□□□□ 0.08
PDLIM1-201ENST00000329399 CCDC124Q96CT7 223 aaKnown RBP15.54■□□□□ 0.08
PDLIM1-201ENST00000329399 ANKRD27Q96NW4 1050 aa15.54■□□□□ 0.08
PDLIM1-201ENST00000329399 ROGDIQ9GZN7 287 aa15.54■□□□□ 0.08
PDLIM1-201ENST00000329399 SPNS1Q9H2V7 528 aa15.54■□□□□ 0.08
PDLIM1-201ENST00000329399 GPN2Q9H9Y4 310 aaPredicted RBP15.54■□□□□ 0.08
PDLIM1-201ENST00000329399 SERTAD3Q9UJW9 196 aa15.54■□□□□ 0.08
PDLIM1-201ENST00000329399 PADI1Q9ULC6 663 aa15.54■□□□□ 0.08
PDLIM1-201ENST00000329399 CORO2BQ9UQ03 480 aa15.54■□□□□ 0.08
PDLIM1-201ENST00000329399 PRORSD1PA6NEY8 169 aa15.53■□□□□ 0.08
PDLIM1-201ENST00000329399 URADA6NGE7 173 aa15.53■□□□□ 0.08
PDLIM1-201ENST00000329399 AQP12BA6NM10 295 aa15.53■□□□□ 0.08
PDLIM1-201ENST00000329399 MED26O95402 600 aa15.53■□□□□ 0.08
PDLIM1-201ENST00000329399 FURINP09958 794 aa15.53■□□□□ 0.08
PDLIM1-201ENST00000329399 ZCCHC18P0CG32 403 aa15.53■□□□□ 0.08
PDLIM1-201ENST00000329399 ATXN8OSP0DMR3 200 aa15.53■□□□□ 0.08
PDLIM1-201ENST00000329399 DLSTP36957 453 aa15.53■□□□□ 0.08
PDLIM1-201ENST00000329399 DGKQP52824 942 aa15.53■□□□□ 0.08
PDLIM1-201ENST00000329399 ITGA1P56199 1179 aa15.53■□□□□ 0.08
PDLIM1-201ENST00000329399 FOXL2P58012 376 aa15.53■□□□□ 0.08
PDLIM1-201ENST00000329399 RPS18P62269 152 aaKnown RBP15.53■□□□□ 0.08
PDLIM1-201ENST00000329399 SNRPNP63162 240 aaKnown RBP15.53■□□□□ 0.08
PDLIM1-201ENST00000329399 MEF2AQ02078 507 aaPredicted RBP15.53■□□□□ 0.08
PDLIM1-201ENST00000329399 SLC34A1Q06495 639 aa15.53■□□□□ 0.08
PDLIM1-201ENST00000329399 PDE7AQ13946 482 aa15.53■□□□□ 0.08
PDLIM1-201ENST00000329399 HEPACAMQ14CZ8 416 aa15.53■□□□□ 0.08
PDLIM1-201ENST00000329399 FXNQ16595 210 aa15.53■□□□□ 0.08
PDLIM1-201ENST00000329399 SLC2A7Q6PXP3 512 aa15.53■□□□□ 0.08
PDLIM1-201ENST00000329399 ZNF517Q6ZMY9 492 aaPredicted RBP15.53■□□□□ 0.08
PDLIM1-201ENST00000329399 PAQR7Q86WK9 346 aa15.53■□□□□ 0.08
PDLIM1-201ENST00000329399 NUDT13Q86X67 352 aa15.53■□□□□ 0.08
PDLIM1-201ENST00000329399 AQP12AQ8IXF9 295 aa15.53■□□□□ 0.08
PDLIM1-201ENST00000329399 KRTCAP2Q8N6L1 136 aa15.53■□□□□ 0.08
PDLIM1-201ENST00000329399 ZNF655Q8N720 491 aaPredicted RBP15.53■□□□□ 0.08
PDLIM1-201ENST00000329399 ANKRD53Q8N9V6 530 aa15.53■□□□□ 0.08
PDLIM1-201ENST00000329399 OR8K5Q8NH50 307 aa15.53■□□□□ 0.08
PDLIM1-201ENST00000329399 CREB3L4Q8TEY5 395 aa15.53■□□□□ 0.08
PDLIM1-201ENST00000329399 TTC9Q92623 222 aa15.53■□□□□ 0.08
PDLIM1-201ENST00000329399 DUS3LQ96G46 650 aaKnown RBP15.53■□□□□ 0.08
PDLIM1-201ENST00000329399 LRGUKQ96M69 825 aa15.53■□□□□ 0.08
PDLIM1-201ENST00000329399 GBP5Q96PP8 586 aa15.53■□□□□ 0.08
PDLIM1-201ENST00000329399 CHST8Q9H2A9 424 aa15.53■□□□□ 0.08
PDLIM1-201ENST00000329399 OR51B5Q9H339 312 aa15.53■□□□□ 0.08
PDLIM1-201ENST00000329399 DDX31Q9H8H2 851 aaKnown RBP15.53■□□□□ 0.08
PDLIM1-201ENST00000329399 S100A14Q9HCY8 104 aa15.53■□□□□ 0.08
PDLIM1-201ENST00000329399 ACTR3BQ9P1U1 418 aa15.53■□□□□ 0.08
PDLIM1-201ENST00000329399 PCDHB3Q9Y5E6 796 aa15.53■□□□□ 0.08
PDLIM1-201ENST00000329399 SPTA1P02549 2419 aa15.53■□□□□ 0.08
PDLIM1-201ENST00000329399 OR2A25A4D2G3 310 aa15.52■□□□□ 0.08
PDLIM1-201ENST00000329399 MEN1O00255 615 aa15.52■□□□□ 0.08
PDLIM1-201ENST00000329399 RNASET2O00584 256 aaKnown RBP15.52■□□□□ 0.08
PDLIM1-201ENST00000329399 NME4O00746 187 aa15.52■□□□□ 0.08
PDLIM1-201ENST00000329399 NDUFS4O43181 175 aa15.52■□□□□ 0.08
PDLIM1-201ENST00000329399 GMNNO75496 209 aa15.52■□□□□ 0.08
PDLIM1-201ENST00000329399 OR2B3O76000 313 aa15.52■□□□□ 0.08
PDLIM1-201ENST00000329399 TCN2P20062 427 aa15.52■□□□□ 0.08
PDLIM1-201ENST00000329399 GCGRP47871 477 aa15.52■□□□□ 0.08
PDLIM1-201ENST00000329399 CCNIQ14094 377 aa15.52■□□□□ 0.08
PDLIM1-201ENST00000329399 UGT8Q16880 541 aa15.52■□□□□ 0.08
PDLIM1-201ENST00000329399 PGS1Q32NB8 556 aa15.52■□□□□ 0.08
PDLIM1-201ENST00000329399 RUNDC3AQ59EK9 446 aa15.52■□□□□ 0.08
PDLIM1-201ENST00000329399 MTX3Q5HYI7 312 aa15.52■□□□□ 0.08
PDLIM1-201ENST00000329399 C6orf10Q5SRN2 563 aa15.52■□□□□ 0.08
PDLIM1-201ENST00000329399 CCNYL2Q5T2Q4 361 aa15.52■□□□□ 0.08
PDLIM1-201ENST00000329399 C1orf189Q5VU69 101 aa15.52■□□□□ 0.08
PDLIM1-201ENST00000329399 ZNF385CQ66K41 422 aaPredicted RBP15.52■□□□□ 0.08
PDLIM1-201ENST00000329399 FAM71E1Q6IPT2 247 aa15.52■□□□□ 0.08
PDLIM1-201ENST00000329399 PACS2Q86VP3 889 aa15.52■□□□□ 0.08
PDLIM1-201ENST00000329399 DHFR2Q86XF0 187 aa15.52■□□□□ 0.08
PDLIM1-201ENST00000329399 DNAJB14Q8TBM8 379 aa15.52■□□□□ 0.08
PDLIM1-201ENST00000329399 C16orf78Q8WTQ4 265 aa15.52■□□□□ 0.08
PDLIM1-201ENST00000329399 SLC45A3Q96JT2 553 aa15.52■□□□□ 0.08
PDLIM1-201ENST00000329399 CCDC115Q96NT0 180 aa15.52■□□□□ 0.08
PDLIM1-201ENST00000329399 KCNC2Q96PR1 638 aa15.52■□□□□ 0.08
PDLIM1-201ENST00000329399 PHF12Q96QT6 1004 aa15.52■□□□□ 0.08
PDLIM1-201ENST00000329399 TBCDQ9BTW9 1192 aa15.52■□□□□ 0.08
PDLIM1-201ENST00000329399 DUSP26Q9BV47 211 aa15.52■□□□□ 0.08
PDLIM1-201ENST00000329399 REXO4Q9GZR2 422 aaKnown RBP15.52■□□□□ 0.08
PDLIM1-201ENST00000329399 ALG2Q9H553 416 aa15.52■□□□□ 0.08
PDLIM1-201ENST00000329399 IL1RL2Q9HB29 575 aa15.52■□□□□ 0.08
PDLIM1-201ENST00000329399 CMTM6Q9NX76 183 aa15.52■□□□□ 0.08
PDLIM1-201ENST00000329399 DHCR7Q9UBM7 475 aaKnown RBP15.52■□□□□ 0.08
PDLIM1-201ENST00000329399 PLCL2Q9UPR0 1127 aa15.52■□□□□ 0.08
PDLIM1-201ENST00000329399 CCDC88CQ9P219 2028 aa15.52■□□□□ 0.08
PDLIM1-201ENST00000329399 SPENQ96T58 3664 aaKnown RBP15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms