RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 MYRIPQ8NFW9 859 aa13.56□□□□□ -0.24
PPP1CA-201ENST00000312989 OR8K3Q8NH51 312 aa13.56□□□□□ -0.24
PPP1CA-201ENST00000312989 SUN3Q8TAQ9 357 aa13.56□□□□□ -0.24
PPP1CA-201ENST00000312989 TRPC4APQ8TEL6 797 aa13.56□□□□□ -0.24
PPP1CA-201ENST00000312989 MTFMTQ96DP5 389 aaKnown RBP13.56□□□□□ -0.24
PPP1CA-201ENST00000312989 SERPINI1Q99574 410 aa13.56□□□□□ -0.24
PPP1CA-201ENST00000312989 MRPL1Q9BYD6 325 aaKnown RBP13.56□□□□□ -0.24
PPP1CA-201ENST00000312989 GSTO2Q9H4Y5 243 aa13.56□□□□□ -0.24
PPP1CA-201ENST00000312989 DEPPQ9NTK1 212 aa13.56□□□□□ -0.24
PPP1CA-201ENST00000312989 LYARQ9NX58 379 aaKnown RBP13.56□□□□□ -0.24
PPP1CA-201ENST00000312989 MS4A12Q9NXJ0 267 aa13.56□□□□□ -0.24
PPP1CA-201ENST00000312989 UNC79Q9P2D8 2635 aa13.56□□□□□ -0.24
PPP1CA-201ENST00000312989 MYOTQ9UBF9 498 aa13.56□□□□□ -0.24
PPP1CA-201ENST00000312989 TBK1Q9UHD2 729 aa13.56□□□□□ -0.24
PPP1CA-201ENST00000312989 PHF11Q9UIL8 331 aa13.56□□□□□ -0.24
PPP1CA-201ENST00000312989 OSGIN2Q9Y236 505 aa13.56□□□□□ -0.24
PPP1CA-201ENST00000312989 PGRMC2O15173 223 aa13.55□□□□□ -0.24
PPP1CA-201ENST00000312989 ZFAND5O76080 213 aa13.55□□□□□ -0.24
PPP1CA-201ENST00000312989 OR4F21O95013 312 aa13.55□□□□□ -0.24
PPP1CA-201ENST00000312989 OTCP00480 354 aa13.55□□□□□ -0.24
PPP1CA-201ENST00000312989 PDYNP01213 254 aa13.55□□□□□ -0.24
PPP1CA-201ENST00000312989 CRYABP02511 175 aaKnown RBP13.55□□□□□ -0.24
PPP1CA-201ENST00000312989 IFNA16P05015 189 aa13.55□□□□□ -0.24
PPP1CA-201ENST00000312989 GSTA1P08263 222 aa13.55□□□□□ -0.24
PPP1CA-201ENST00000312989 ATP5F1P24539 256 aaPredicted RBP13.55□□□□□ -0.24
PPP1CA-201ENST00000312989 VSNL1P62760 191 aa13.55□□□□□ -0.24
PPP1CA-201ENST00000312989 C10orf62Q5T681 223 aaPredicted RBP13.55□□□□□ -0.24
PPP1CA-201ENST00000312989 LYPD8Q6UX82 237 aa13.55□□□□□ -0.24
PPP1CA-201ENST00000312989 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.55□□□□□ -0.24
PPP1CA-201ENST00000312989 CPSF7Q8N684 471 aaKnown RBP13.55□□□□□ -0.24
PPP1CA-201ENST00000312989 TANKQ92844 425 aa13.55□□□□□ -0.24
PPP1CA-201ENST00000312989 DAZLQ92904 295 aaKnown RBP13.55□□□□□ -0.24
PPP1CA-201ENST00000312989 RELTQ969Z4 430 aa13.55□□□□□ -0.24
PPP1CA-201ENST00000312989 PPWD1Q96BP3 646 aaKnown RBP13.55□□□□□ -0.24
PPP1CA-201ENST00000312989 L3HYPDHQ96EM0 354 aa13.55□□□□□ -0.24
PPP1CA-201ENST00000312989 RASL10BQ96S79 203 aa13.55□□□□□ -0.24
PPP1CA-201ENST00000312989 ZNF382Q96SR6 550 aa13.55□□□□□ -0.24
PPP1CA-201ENST00000312989 HBEGFQ99075 208 aa13.55□□□□□ -0.24
PPP1CA-201ENST00000312989 OR8D2Q9GZM6 311 aa13.55□□□□□ -0.24
PPP1CA-201ENST00000312989 CLCA3PQ9Y6N3 262 aa13.55□□□□□ -0.24
PPP1CA-201ENST00000312989 GLOD5A6NK44 160 aa13.54□□□□□ -0.24
PPP1CA-201ENST00000312989 UBFD1O14562 309 aaKnown RBP13.54□□□□□ -0.24
PPP1CA-201ENST00000312989 OR2J2O76002 312 aa13.54□□□□□ -0.24
PPP1CA-201ENST00000312989 OR6B1O95007 311 aa13.54□□□□□ -0.24
PPP1CA-201ENST00000312989 UNC5CO95185 931 aa13.54□□□□□ -0.24
PPP1CA-201ENST00000312989 NADKO95544 446 aaPredicted RBP13.54□□□□□ -0.24
PPP1CA-201ENST00000312989 GPR75O95800 540 aa13.54□□□□□ -0.24
PPP1CA-201ENST00000312989 PROCP04070 461 aa13.54□□□□□ -0.24
PPP1CA-201ENST00000312989 NR2F6P10588 404 aa13.54□□□□□ -0.24
PPP1CA-201ENST00000312989 CD46P15529 392 aa13.54□□□□□ -0.24
PPP1CA-201ENST00000312989 CHN1P15882 459 aa13.54□□□□□ -0.24
PPP1CA-201ENST00000312989 IMPDH1P20839 514 aa13.54□□□□□ -0.24
PPP1CA-201ENST00000312989 HTR6P50406 440 aa13.54□□□□□ -0.24
PPP1CA-201ENST00000312989 NR0B1P51843 470 aaKnown RBP13.54□□□□□ -0.24
PPP1CA-201ENST00000312989 RNF4P78317 190 aa13.54□□□□□ -0.24
PPP1CA-201ENST00000312989 SPRED3Q2MJR0 410 aa13.54□□□□□ -0.24
PPP1CA-201ENST00000312989 COMMD6Q7Z4G1 85 aa13.54□□□□□ -0.24
PPP1CA-201ENST00000312989 ST13P4Q8IZP2 240 aaPredicted RBP13.54□□□□□ -0.24
PPP1CA-201ENST00000312989 MMP21Q8N119 569 aa13.54□□□□□ -0.24
PPP1CA-201ENST00000312989 TMEM178AQ8NBL3 297 aa13.54□□□□□ -0.24
PPP1CA-201ENST00000312989 EPS8L3Q8TE67 593 aaKnown RBP13.54□□□□□ -0.24
PPP1CA-201ENST00000312989 DOK4Q8TEW6 326 aa13.54□□□□□ -0.24
PPP1CA-201ENST00000312989 ATP6V1E2Q96A05 226 aa13.54□□□□□ -0.24
PPP1CA-201ENST00000312989 C11orf24Q96F05 449 aaPredicted RBP13.54□□□□□ -0.24
PPP1CA-201ENST00000312989 SENP5Q96HI0 755 aaPredicted RBP13.54□□□□□ -0.24
PPP1CA-201ENST00000312989 GPR137Q96N19 417 aa13.54□□□□□ -0.24
PPP1CA-201ENST00000312989 CENPKQ9BS16 269 aa13.54□□□□□ -0.24
PPP1CA-201ENST00000312989 C12orf65Q9H3J6 166 aaKnown RBP13.54□□□□□ -0.24
PPP1CA-201ENST00000312989 PLEKHB1Q9UF11 243 aaPredicted RBP13.54□□□□□ -0.24
PPP1CA-201ENST00000312989 ADAM29Q9UKF5 820 aa13.54□□□□□ -0.24
PPP1CA-201ENST00000312989 CES1P1Q9UKY3 287 aa13.54□□□□□ -0.24
PPP1CA-201ENST00000312989 ZNF835Q9Y2P0 537 aa13.54□□□□□ -0.24
PPP1CA-201ENST00000312989 YARS2Q9Y2Z4 477 aaKnown RBP13.54□□□□□ -0.24
PPP1CA-201ENST00000312989 SPACA6W5XKT8 324 aa13.54□□□□□ -0.24
PPP1CA-201ENST00000312989 A0A0G2JMM0 328 aa13.53□□□□□ -0.24
PPP1CA-201ENST00000312989 A0A1W2PPB8 328 aa13.53□□□□□ -0.24
PPP1CA-201ENST00000312989 A0A1W2PRS3 328 aa13.53□□□□□ -0.24
PPP1CA-201ENST00000312989 PINLYPA6NC86 204 aa13.53□□□□□ -0.24
PPP1CA-201ENST00000312989 KIR3DP1A8MWS1 328 aa13.53□□□□□ -0.24
PPP1CA-201ENST00000312989 WWP2O00308 870 aa13.53□□□□□ -0.24
PPP1CA-201ENST00000312989 FCHO1O14526 889 aa13.53□□□□□ -0.24
PPP1CA-201ENST00000312989 LRRTM2O43300 516 aa13.53□□□□□ -0.24
PPP1CA-201ENST00000312989 SUPT7LO94864 414 aa13.53□□□□□ -0.24
PPP1CA-201ENST00000312989 ALOX15P16050 662 aaPredicted RBP13.53□□□□□ -0.24
PPP1CA-201ENST00000312989 SOX3P41225 446 aa13.53□□□□□ -0.24
PPP1CA-201ENST00000312989 SLCO1A2P46721 670 aa13.53□□□□□ -0.24
PPP1CA-201ENST00000312989 FOXA1P55317 472 aa13.53□□□□□ -0.24
PPP1CA-201ENST00000312989 PHEXP78562 749 aa13.53□□□□□ -0.24
PPP1CA-201ENST00000312989 ELOAQ14241 798 aaKnown RBP13.53□□□□□ -0.24
PPP1CA-201ENST00000312989 C1QL3Q5VWW1 255 aa13.53□□□□□ -0.24
PPP1CA-201ENST00000312989 HSDL2Q6YN16 418 aa13.53□□□□□ -0.24
PPP1CA-201ENST00000312989 SULF2Q8IWU5 870 aa13.53□□□□□ -0.24
PPP1CA-201ENST00000312989 ZFP62Q8NB50 900 aaPredicted RBP13.53□□□□□ -0.24
PPP1CA-201ENST00000312989 SREK1Q8WXA9 508 aaKnown RBP13.53□□□□□ -0.24
PPP1CA-201ENST00000312989 FBXL20Q96IG2 436 aa13.53□□□□□ -0.24
PPP1CA-201ENST00000312989 C5orf34Q96MH7 638 aa13.53□□□□□ -0.24
PPP1CA-201ENST00000312989 TSPAN10Q9H1Z9 355 aaPredicted RBP13.53□□□□□ -0.24
PPP1CA-201ENST00000312989 BRF2Q9HAW0 419 aa13.53□□□□□ -0.24
PPP1CA-201ENST00000312989 SH2D2AQ9NP31 389 aa13.53□□□□□ -0.24
PPP1CA-201ENST00000312989 TNFRSF12AQ9NP84 129 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms