RNA–Protein interactions for RNA: ENST00000309859.8

GGA2-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA2, Length 5,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-201ENST00000309859 PM20D2Q8IYS1 436 aa10.4□□□□□ -0.74
GGA2-201ENST00000309859 RNASE11Q8TAA1 199 aaKnown RBP10.4□□□□□ -0.74
GGA2-201ENST00000309859 TEFMQ96QE5 360 aaKnown RBP10.4□□□□□ -0.74
GGA2-201ENST00000309859 B3GNT4Q9C0J1 378 aa10.4□□□□□ -0.74
GGA2-201ENST00000309859 GORASP2Q9H8Y8 452 aa10.4□□□□□ -0.74
GGA2-201ENST00000309859 NMUR1Q9HB89 426 aa10.4□□□□□ -0.74
GGA2-201ENST00000309859 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.4□□□□□ -0.74
GGA2-201ENST00000309859 CD84Q9UIB8 345 aa10.4□□□□□ -0.74
GGA2-201ENST00000309859 PARP4Q9UKK3 1724 aaKnown RBP10.4□□□□□ -0.74
GGA2-201ENST00000309859 C13orf42A0A1B0GVH6 325 aa10.4□□□□□ -0.74
GGA2-201ENST00000309859 EFCAB14O75071 495 aa10.4□□□□□ -0.74
GGA2-201ENST00000309859 ERAL1O75616 437 aaKnown RBP10.4□□□□□ -0.74
GGA2-201ENST00000309859 APOC1P02654 83 aa10.4□□□□□ -0.74
GGA2-201ENST00000309859 IGFBP1P08833 259 aaPredicted RBP10.4□□□□□ -0.74
GGA2-201ENST00000309859 ICAM2P13598 275 aa10.4□□□□□ -0.74
GGA2-201ENST00000309859 SMPD1P17405 629 aa10.4□□□□□ -0.74
GGA2-201ENST00000309859 OR1G1P47890 313 aa10.4□□□□□ -0.74
GGA2-201ENST00000309859 GBX2P52951 348 aaPredicted RBP10.4□□□□□ -0.74
GGA2-201ENST00000309859 CDH11P55287 796 aa10.4□□□□□ -0.74
GGA2-201ENST00000309859 DEFA6Q01524 100 aa10.4□□□□□ -0.74
GGA2-201ENST00000309859 SLC5A12Q1EHB4 618 aa10.4□□□□□ -0.74
GGA2-201ENST00000309859 HECTD3Q5T447 861 aa10.4□□□□□ -0.74
GGA2-201ENST00000309859 PTRH1Q86Y79 214 aaKnown RBP10.4□□□□□ -0.74
GGA2-201ENST00000309859 TBC1D19Q8N5T2 526 aa10.4□□□□□ -0.74
GGA2-201ENST00000309859 C3orf14Q9HBI5 128 aa10.4□□□□□ -0.74
GGA2-201ENST00000309859 TXNL4BQ9NX01 149 aaKnown RBP10.4□□□□□ -0.74
GGA2-201ENST00000309859 ERVK-19Q9WJR5 959 aa10.4□□□□□ -0.74
GGA2-201ENST00000309859 TRBV23-1A0A0A0MS06 115 aa10.4□□□□□ -0.74
GGA2-201ENST00000309859 A0A0G2JN53 185 aa10.4□□□□□ -0.74
GGA2-201ENST00000309859 F5H0A9 414 aaPredicted RBP10.4□□□□□ -0.74
GGA2-201ENST00000309859 SLC9A3R1O14745 358 aaPredicted RBP10.4□□□□□ -0.74
GGA2-201ENST00000309859 SLC16A6O15403 523 aa10.4□□□□□ -0.74
GGA2-201ENST00000309859 C6orf47O95873 294 aa10.4□□□□□ -0.74
GGA2-201ENST00000309859 LIPCP11150 499 aa10.4□□□□□ -0.74
GGA2-201ENST00000309859 S100A2P29034 98 aa10.4□□□□□ -0.74
GGA2-201ENST00000309859 CLCN7P51798 805 aa10.4□□□□□ -0.74
GGA2-201ENST00000309859 FAM74A1Q5RGS3 127 aa10.4□□□□□ -0.74
GGA2-201ENST00000309859 GPRIN1Q7Z2K8 1008 aa10.4□□□□□ -0.74
GGA2-201ENST00000309859 MS4A15Q8N5U1 240 aa10.4□□□□□ -0.74
GGA2-201ENST00000309859 TMEM145Q8NBT3 493 aa10.4□□□□□ -0.74
GGA2-201ENST00000309859 OR4M2Q8NGB6 313 aa10.4□□□□□ -0.74
GGA2-201ENST00000309859 ZDHHC1Q8WTX9 485 aa10.4□□□□□ -0.74
GGA2-201ENST00000309859 MAFIPQ8WZ33 124 aa10.4□□□□□ -0.74
GGA2-201ENST00000309859 EXOSC8Q96B26 276 aaKnown RBP10.4□□□□□ -0.74
GGA2-201ENST00000309859 MYO19Q96H55 970 aa10.4□□□□□ -0.74
GGA2-201ENST00000309859 C1orf74Q96LT6 269 aa10.4□□□□□ -0.74
GGA2-201ENST00000309859 P2RY13Q9BPV8 354 aa10.4□□□□□ -0.74
GGA2-201ENST00000309859 MAPKAP1Q9BPZ7 522 aa10.4□□□□□ -0.74
GGA2-201ENST00000309859 DERL2Q9GZP9 239 aa10.4□□□□□ -0.74
GGA2-201ENST00000309859 LINC00597Q9H2U6 94 aa10.4□□□□□ -0.74
GGA2-201ENST00000309859 DUSP21Q9H596 190 aa10.4□□□□□ -0.74
GGA2-201ENST00000309859 MAGIXQ9H6Y5 334 aa10.4□□□□□ -0.74
GGA2-201ENST00000309859 MEIS3P1A6NDR6 274 aa10.4□□□□□ -0.75
GGA2-201ENST00000309859 POM121BA6NF01 834 aa10.4□□□□□ -0.75
GGA2-201ENST00000309859 CSO75390 466 aaKnown RBP10.4□□□□□ -0.75
GGA2-201ENST00000309859 EPOP01588 193 aa10.4□□□□□ -0.75
GGA2-201ENST00000309859 ODC1P11926 461 aa10.4□□□□□ -0.75
GGA2-201ENST00000309859 ENPP1P22413 925 aa10.4□□□□□ -0.75
GGA2-201ENST00000309859 HSDL2Q6YN16 418 aa10.4□□□□□ -0.75
GGA2-201ENST00000309859 GPALPP1Q8IXQ4 340 aa10.4□□□□□ -0.75
GGA2-201ENST00000309859 STOML3Q8TAV4 291 aa10.4□□□□□ -0.75
GGA2-201ENST00000309859 DUS3LQ96G46 650 aaKnown RBP10.4□□□□□ -0.75
GGA2-201ENST00000309859 MICU1Q9BPX6 476 aa10.4□□□□□ -0.75
GGA2-201ENST00000309859 DOHHQ9BU89 302 aa10.4□□□□□ -0.75
GGA2-201ENST00000309859 ZFYVE1Q9HBF4 777 aa10.4□□□□□ -0.75
GGA2-201ENST00000309859 ZNF639Q9UID6 485 aa10.4□□□□□ -0.75
GGA2-201ENST00000309859 LRFN2Q9ULH4 789 aa10.4□□□□□ -0.75
GGA2-201ENST00000309859 APEHP13798 732 aaKnown RBP10.39□□□□□ -0.75
GGA2-201ENST00000309859 LHX1P48742 406 aa10.39□□□□□ -0.75
GGA2-201ENST00000309859 STC1P52823 247 aa10.39□□□□□ -0.75
GGA2-201ENST00000309859 CXCR4P61073 352 aa10.39□□□□□ -0.75
GGA2-201ENST00000309859 SSX2Q16385 188 aa10.39□□□□□ -0.75
GGA2-201ENST00000309859 RPS26P11Q5JNZ5 115 aaPredicted RBP10.39□□□□□ -0.75
GGA2-201ENST00000309859 ZNF425Q6IV72 752 aa10.39□□□□□ -0.75
GGA2-201ENST00000309859 RNF44Q7L0R7 432 aa10.39□□□□□ -0.75
GGA2-201ENST00000309859 GPR149Q86SP6 731 aa10.39□□□□□ -0.75
GGA2-201ENST00000309859 SERPINA9Q86WD7 417 aa10.39□□□□□ -0.75
GGA2-201ENST00000309859 C1orf52Q8N6N3 182 aaKnown RBP10.39□□□□□ -0.75
GGA2-201ENST00000309859 MARC2Q969Z3 335 aa10.39□□□□□ -0.75
GGA2-201ENST00000309859 SSX3Q99909 188 aa10.39□□□□□ -0.75
GGA2-201ENST00000309859 TINAGL1Q9GZM7 467 aaPredicted RBP10.39□□□□□ -0.75
GGA2-201ENST00000309859 CORO2BQ9UQ03 480 aa10.39□□□□□ -0.75
GGA2-201ENST00000309859 PDE4DIPQ5VU43 2346 aa10.39□□□□□ -0.75
GGA2-201ENST00000309859 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.39□□□□□ -0.75
GGA2-201ENST00000309859 C5orf51A6NDU8 294 aa10.39□□□□□ -0.75
GGA2-201ENST00000309859 MFSD10Q14728 455 aa10.39□□□□□ -0.75
GGA2-201ENST00000309859 COQ5Q5HYK3 327 aa10.39□□□□□ -0.75
GGA2-201ENST00000309859 PRAMEF17Q5VTA0 474 aa10.39□□□□□ -0.75
GGA2-201ENST00000309859 NAGSQ8N159 534 aa10.39□□□□□ -0.75
GGA2-201ENST00000309859 ZBTB2Q8N680 514 aa10.39□□□□□ -0.75
GGA2-201ENST00000309859 TMEM121BQ9BXQ6 578 aaPredicted RBP10.39□□□□□ -0.75
GGA2-201ENST00000309859 DEFB129Q9H1M3 183 aa10.39□□□□□ -0.75
GGA2-201ENST00000309859 KCNH6Q9H252 994 aa10.39□□□□□ -0.75
GGA2-201ENST00000309859 MARK1Q9P0L2 795 aa10.39□□□□□ -0.75
GGA2-201ENST00000309859 MTX2O75431 263 aa10.39□□□□□ -0.75
GGA2-201ENST00000309859 HK1P19367 917 aa10.39□□□□□ -0.75
GGA2-201ENST00000309859 CDK6Q00534 326 aa10.39□□□□□ -0.75
GGA2-201ENST00000309859 POU4F2Q12837 409 aa10.39□□□□□ -0.75
GGA2-201ENST00000309859 ILF3Q12906 894 aaKnown RBP eCLIP10.39□□□□□ -0.754e-7■■■■□ 20.7
GGA2-201ENST00000309859 CD300LFQ8TDQ1 290 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms