RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 UGDHO60701 494 aa18.1■□□□□ 0.49
LIME1-201ENST00000309546 PDE9AO76083 593 aa18.1■□□□□ 0.49
LIME1-201ENST00000309546 PRF1P14222 555 aa18.1■□□□□ 0.49
LIME1-201ENST00000309546 TLX1P31314 330 aaPredicted RBP18.1■□□□□ 0.49
LIME1-201ENST00000309546 PTGS2P35354 604 aa18.1■□□□□ 0.49
LIME1-201ENST00000309546 NEK2P51955 445 aa18.1■□□□□ 0.49
LIME1-201ENST00000309546 PLIN5Q00G26 463 aa18.1■□□□□ 0.49
LIME1-201ENST00000309546 FOLH1Q04609 750 aa18.1■□□□□ 0.49
LIME1-201ENST00000309546 ZNF630Q2M218 657 aaPredicted RBP18.1■□□□□ 0.49
LIME1-201ENST00000309546 ZNF750Q32MQ0 723 aa18.1■□□□□ 0.49
LIME1-201ENST00000309546 CMPK2Q5EBM0 449 aa18.1■□□□□ 0.49
LIME1-201ENST00000309546 TAOK1Q7L7X3 1001 aa18.1■□□□□ 0.49
LIME1-201ENST00000309546 CD163Q86VB7 1156 aa18.1■□□□□ 0.49
LIME1-201ENST00000309546 RELL1Q8IUW5 271 aa18.1■□□□□ 0.49
LIME1-201ENST00000309546 ZCCHC7Q8N3Z6 543 aaKnown RBP18.1■□□□□ 0.49
LIME1-201ENST00000309546 ZFP62Q8NB50 900 aaPredicted RBP18.1■□□□□ 0.49
LIME1-201ENST00000309546 OR52N2Q8NGI0 321 aa18.1■□□□□ 0.49
LIME1-201ENST00000309546 C16orf52Q8NHV5 167 aa18.1■□□□□ 0.49
LIME1-201ENST00000309546 UHMK1Q8TAS1 419 aaKnown RBP18.1■□□□□ 0.49
LIME1-201ENST00000309546 DOK4Q8TEW6 326 aa18.1■□□□□ 0.49
LIME1-201ENST00000309546 ZNF721Q8TF20 911 aa18.1■□□□□ 0.49
LIME1-201ENST00000309546 SLC44A1Q8WWI5 657 aa18.1■□□□□ 0.49
LIME1-201ENST00000309546 PPWD1Q96BP3 646 aaKnown RBP18.1■□□□□ 0.49
LIME1-201ENST00000309546 PHF21BQ96EK2 531 aa18.1■□□□□ 0.49
LIME1-201ENST00000309546 CDK15Q96Q40 435 aa18.1■□□□□ 0.49
LIME1-201ENST00000309546 PAFAH2Q99487 392 aa18.1■□□□□ 0.49
LIME1-201ENST00000309546 NOL11Q9H8H0 719 aaKnown RBP18.1■□□□□ 0.49
LIME1-201ENST00000309546 TSC22D4Q9Y3Q8 395 aa18.1■□□□□ 0.49
LIME1-201ENST00000309546 ATG4BQ9Y4P1 393 aa18.1■□□□□ 0.49
LIME1-201ENST00000309546 CACNA1CQ13936 2221 aa18.09■□□□□ 0.49
LIME1-201ENST00000309546 A0A0G2JMM0 328 aa18.09■□□□□ 0.49
LIME1-201ENST00000309546 A0A1W2PPB8 328 aa18.09■□□□□ 0.49
LIME1-201ENST00000309546 A0A1W2PRS3 328 aa18.09■□□□□ 0.49
LIME1-201ENST00000309546 PINLYPA6NC86 204 aa18.09■□□□□ 0.49
LIME1-201ENST00000309546 KIR3DP1A8MWS1 328 aa18.09■□□□□ 0.49
LIME1-201ENST00000309546 POC1B-GALNT4F8VUJ3 575 aa18.09■□□□□ 0.49
LIME1-201ENST00000309546 ACOT7O00154 380 aa18.09■□□□□ 0.49
LIME1-201ENST00000309546 DYRK3O43781 588 aa18.09■□□□□ 0.49
LIME1-201ENST00000309546 EEDO75530 441 aaKnown RBP18.09■□□□□ 0.49
LIME1-201ENST00000309546 PTX3P26022 381 aaPredicted RBP18.09■□□□□ 0.49
LIME1-201ENST00000309546 BUD31P41223 144 aaPredicted RBP18.09■□□□□ 0.49
LIME1-201ENST00000309546 IGLV3-21P80748 117 aaPredicted RBP18.09■□□□□ 0.49
LIME1-201ENST00000309546 CYP20A1Q6UW02 462 aa18.09■□□□□ 0.49
LIME1-201ENST00000309546 RTL4Q6ZR62 310 aa18.09■□□□□ 0.49
LIME1-201ENST00000309546 MCEMP1Q8IX19 187 aa18.09■□□□□ 0.49
LIME1-201ENST00000309546 C7orf57Q8NEG2 295 aa18.09■□□□□ 0.49
LIME1-201ENST00000309546 OR2M7Q8NG81 312 aa18.09■□□□□ 0.49
LIME1-201ENST00000309546 OR8K3Q8NH51 312 aa18.09■□□□□ 0.49
LIME1-201ENST00000309546 FAM57AQ8TBR7 257 aa18.09■□□□□ 0.49
LIME1-201ENST00000309546 MTFMTQ96DP5 389 aaKnown RBP18.09■□□□□ 0.49
LIME1-201ENST00000309546 RBM18Q96H35 190 aaKnown RBP18.09■□□□□ 0.49
LIME1-201ENST00000309546 TSPYL1Q9H0U9 437 aa18.09■□□□□ 0.49
LIME1-201ENST00000309546 DEFB127Q9H1M4 99 aa18.09■□□□□ 0.49
LIME1-201ENST00000309546 RUBCNLQ9H714 662 aa18.09■□□□□ 0.49
LIME1-201ENST00000309546 CHST11Q9NPF2 352 aa18.09■□□□□ 0.49
LIME1-201ENST00000309546 LYARQ9NX58 379 aaKnown RBP18.09■□□□□ 0.49
LIME1-201ENST00000309546 XPR1Q9UBH6 696 aa18.09■□□□□ 0.49
LIME1-201ENST00000309546 PPT2Q9UMR5 302 aa18.09■□□□□ 0.49
LIME1-201ENST00000309546 GLOD5A6NK44 160 aa18.08■□□□□ 0.48
LIME1-201ENST00000309546 ZNF354AO60765 605 aaPredicted RBP18.08■□□□□ 0.48
LIME1-201ENST00000309546 CLDN9O95484 217 aa18.08■□□□□ 0.48
LIME1-201ENST00000309546 CLDN14O95500 239 aa18.08■□□□□ 0.48
LIME1-201ENST00000309546 RBP1P09455 135 aa18.08■□□□□ 0.48
LIME1-201ENST00000309546 CTAGE8P0CG41 777 aa18.08■□□□□ 0.48
LIME1-201ENST00000309546 NR2F6P10588 404 aa18.08■□□□□ 0.48
LIME1-201ENST00000309546 COX6B1P14854 86 aa18.08■□□□□ 0.48
LIME1-201ENST00000309546 ALOX15P16050 662 aaPredicted RBP18.08■□□□□ 0.48
LIME1-201ENST00000309546 BSGP35613 385 aa18.08■□□□□ 0.48
LIME1-201ENST00000309546 SERPINB9P50453 376 aa18.08■□□□□ 0.48
LIME1-201ENST00000309546 CCNG1P51959 295 aa18.08■□□□□ 0.48
LIME1-201ENST00000309546 PPIAP62937 165 aaKnown RBP18.08■□□□□ 0.48
LIME1-201ENST00000309546 ASPHQ12797 758 aa18.08■□□□□ 0.48
LIME1-201ENST00000309546 CDSNQ15517 529 aa18.08■□□□□ 0.48
LIME1-201ENST00000309546 OPN5Q6U736 354 aa18.08■□□□□ 0.48
LIME1-201ENST00000309546 DGAT2L6Q6ZPD8 337 aa18.08■□□□□ 0.48
LIME1-201ENST00000309546 NUDT13Q86X67 352 aa18.08■□□□□ 0.48
LIME1-201ENST00000309546 CTAGE4Q8IX94 777 aa18.08■□□□□ 0.48
LIME1-201ENST00000309546 C9orf40Q8IXQ3 194 aa18.08■□□□□ 0.48
LIME1-201ENST00000309546 EID3Q8N140 333 aa18.08■□□□□ 0.48
LIME1-201ENST00000309546 L3MBTL4Q8NA19 623 aa18.08■□□□□ 0.48
LIME1-201ENST00000309546 MNS1Q8NEH6 495 aa18.08■□□□□ 0.48
LIME1-201ENST00000309546 OR52B6Q8NGF0 335 aa18.08■□□□□ 0.48
LIME1-201ENST00000309546 WDR20Q8TBZ3 569 aa18.08■□□□□ 0.48
LIME1-201ENST00000309546 TANKQ92844 425 aa18.08■□□□□ 0.48
LIME1-201ENST00000309546 SENP5Q96HI0 755 aaPredicted RBP18.08■□□□□ 0.48
LIME1-201ENST00000309546 ART5Q96L15 291 aa18.08■□□□□ 0.48
LIME1-201ENST00000309546 CNPPD1Q9BV87 410 aa18.08■□□□□ 0.48
LIME1-201ENST00000309546 ZNF717Q9BY31 904 aaPredicted RBP18.08■□□□□ 0.48
LIME1-201ENST00000309546 FUT8Q9BYC5 575 aa18.08■□□□□ 0.48
LIME1-201ENST00000309546 A0A0A6YYD5 115 aa18.07■□□□□ 0.48
LIME1-201ENST00000309546 E9PLN8 166 aa18.07■□□□□ 0.48
LIME1-201ENST00000309546 HRKO00198 91 aa18.07■□□□□ 0.48
LIME1-201ENST00000309546 OR7A17O14581 309 aa18.07■□□□□ 0.48
LIME1-201ENST00000309546 TMPRSS11DO60235 418 aa18.07■□□□□ 0.48
LIME1-201ENST00000309546 OR10H2O60403 315 aa18.07■□□□□ 0.48
LIME1-201ENST00000309546 SMIM24O75264 130 aa18.07■□□□□ 0.48
LIME1-201ENST00000309546 KRT38O76015 456 aa18.07■□□□□ 0.48
LIME1-201ENST00000309546 GBAP04062 536 aa18.07■□□□□ 0.48
LIME1-201ENST00000309546 AGAP20933 346 aa18.07■□□□□ 0.48
LIME1-201ENST00000309546 TNFRSF8P28908 595 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms