RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 DNAJB14Q8TBM8 379 aa22.97■■□□□ 1.27
HOXC9-201ENST00000303450 ANKRD9Q96BM1 317 aaPredicted RBP22.97■■□□□ 1.27
HOXC9-201ENST00000303450 MAELQ96JY0 434 aaKnown RBP22.97■■□□□ 1.27
HOXC9-201ENST00000303450 EGLN2Q96KS0 407 aa22.97■■□□□ 1.27
HOXC9-201ENST00000303450 ALOXE3Q9BYJ1 711 aa22.97■■□□□ 1.27
HOXC9-201ENST00000303450 HEY2Q9UBP5 337 aa22.97■■□□□ 1.27
HOXC9-201ENST00000303450 PSME2Q9UL46 239 aa22.97■■□□□ 1.27
HOXC9-201ENST00000303450 LOC102723996A0A087X1L8 192 aa22.96■■□□□ 1.27
HOXC9-201ENST00000303450 TCRBV16S1A1N1A0A5B0 115 aa22.96■■□□□ 1.27
HOXC9-201ENST00000303450 SYNDIG1LA6NDD5 238 aa22.96■■□□□ 1.27
HOXC9-201ENST00000303450 GPR75O95800 540 aa22.96■■□□□ 1.27
HOXC9-201ENST00000303450 ASMTP46597 345 aa22.96■■□□□ 1.27
HOXC9-201ENST00000303450 OR4D2P58180 307 aa22.96■■□□□ 1.27
HOXC9-201ENST00000303450 ACTN3Q08043 901 aaPredicted RBP22.96■■□□□ 1.27
HOXC9-201ENST00000303450 SERTAD2Q14140 314 aa22.96■■□□□ 1.27
HOXC9-201ENST00000303450 FAM71E1Q6IPT2 247 aa22.96■■□□□ 1.27
HOXC9-201ENST00000303450 SLC48A1Q6P1K1 146 aa22.96■■□□□ 1.27
HOXC9-201ENST00000303450 ACAD11Q709F0 780 aa22.96■■□□□ 1.27
HOXC9-201ENST00000303450 C7orf57Q8NEG2 295 aa22.96■■□□□ 1.27
HOXC9-201ENST00000303450 OR11G2Q8NGC1 345 aa22.96■■□□□ 1.27
HOXC9-201ENST00000303450 CLHC1Q8NHS4 586 aa22.96■■□□□ 1.27
HOXC9-201ENST00000303450 ACTRT2Q8TDY3 377 aa22.96■■□□□ 1.27
HOXC9-201ENST00000303450 THOC1Q96FV9 657 aaKnown RBP22.96■■□□□ 1.27
HOXC9-201ENST00000303450 TRIM55Q9BYV6 548 aa22.96■■□□□ 1.27
HOXC9-201ENST00000303450 NPHS2Q9NP85 383 aa22.96■■□□□ 1.27
HOXC9-201ENST00000303450 MIEF1Q9NQG6 463 aa22.96■■□□□ 1.27
HOXC9-201ENST00000303450 FAM53CQ9NYF3 392 aa22.96■■□□□ 1.27
HOXC9-201ENST00000303450 C5AR2Q9P296 337 aa22.96■■□□□ 1.27
HOXC9-201ENST00000303450 CLDN16Q9Y5I7 305 aa22.96■■□□□ 1.27
HOXC9-201ENST00000303450 CROCCQ5TZA2 2017 aa22.96■■□□□ 1.27
HOXC9-201ENST00000303450 TGFBR3LH3BV60 316 aa22.95■■□□□ 1.26
HOXC9-201ENST00000303450 POLR3GO15318 223 aaPredicted RBP22.95■■□□□ 1.26
HOXC9-201ENST00000303450 DDCP20711 480 aa22.95■■□□□ 1.26
HOXC9-201ENST00000303450 PIK3R1P27986 724 aa22.95■■□□□ 1.26
HOXC9-201ENST00000303450 SFT2D3Q587I9 215 aa22.95■■□□□ 1.26
HOXC9-201ENST00000303450 OGFOD2Q6N063 350 aa22.95■■□□□ 1.26
HOXC9-201ENST00000303450 OR4K14Q8NGD5 310 aa22.95■■□□□ 1.26
HOXC9-201ENST00000303450 CEP70Q8NHQ1 597 aa22.95■■□□□ 1.26
HOXC9-201ENST00000303450 GFM2Q969S9 779 aaKnown RBP22.95■■□□□ 1.26
HOXC9-201ENST00000303450 CATSPER2Q96P56 530 aa22.95■■□□□ 1.26
HOXC9-201ENST00000303450 ASIC5Q9NY37 505 aa22.95■■□□□ 1.26
HOXC9-201ENST00000303450 FBXL4Q9UKA2 621 aa22.95■■□□□ 1.26
HOXC9-201ENST00000303450 CES1P1Q9UKY3 287 aa22.95■■□□□ 1.26
HOXC9-201ENST00000303450 MAN2B2Q9Y2E5 1009 aa22.95■■□□□ 1.26
HOXC9-201ENST00000303450 IGHV3-20A0A0C4DH32 117 aa22.94■■□□□ 1.26
HOXC9-201ENST00000303450 MYOCOSA0A1B0GUC4 107 aa22.94■■□□□ 1.26
HOXC9-201ENST00000303450 LRATO95237 230 aa22.94■■□□□ 1.26
HOXC9-201ENST00000303450 IFNA16P05015 189 aa22.94■■□□□ 1.26
HOXC9-201ENST00000303450 G6PDP11413 515 aa22.94■■□□□ 1.26
HOXC9-201ENST00000303450 IDH3AP50213 366 aa22.94■■□□□ 1.26
HOXC9-201ENST00000303450 BIKQ13323 160 aa22.94■■□□□ 1.26
HOXC9-201ENST00000303450 DEFB109BQ30KR1 87 aa22.94■■□□□ 1.26
HOXC9-201ENST00000303450 SPATA19Q7Z5L4 167 aa22.94■■□□□ 1.26
HOXC9-201ENST00000303450 KLHL29Q96CT2 875 aa22.94■■□□□ 1.26
HOXC9-201ENST00000303450 OR52B2Q96RD2 323 aa22.94■■□□□ 1.26
HOXC9-201ENST00000303450 SIKE1Q9BRV8 207 aa22.94■■□□□ 1.26
HOXC9-201ENST00000303450 PNO1Q9NRX1 252 aaKnown RBP22.94■■□□□ 1.26
HOXC9-201ENST00000303450 DCTN4Q9UJW0 460 aa22.94■■□□□ 1.26
HOXC9-201ENST00000303450 UTS2RQ9UKP6 389 aa22.94■■□□□ 1.26
HOXC9-201ENST00000303450 IGHV1-45A0A0A0MS14 117 aa22.93■■□□□ 1.26
HOXC9-201ENST00000303450 AKAP10O43572 662 aa22.93■■□□□ 1.26
HOXC9-201ENST00000303450 ERAL1O75616 437 aaKnown RBP22.93■■□□□ 1.26
HOXC9-201ENST00000303450 TROVE2P10155 538 aaKnown RBP eCLIP22.93■■□□□ 1.26
HOXC9-201ENST00000303450 COX6A1P12074 109 aa22.93■■□□□ 1.26
HOXC9-201ENST00000303450 DIO3P55073 304 aa22.93■■□□□ 1.26
HOXC9-201ENST00000303450 PTGR1Q14914 329 aa22.93■■□□□ 1.26
HOXC9-201ENST00000303450 NDUFAF7Q7L592 441 aa22.93■■□□□ 1.26
HOXC9-201ENST00000303450 SNRNP27Q8WVK2 155 aaKnown RBP22.93■■□□□ 1.26
HOXC9-201ENST00000303450 FER1L6-AS2Q96M78 137 aa22.93■■□□□ 1.26
HOXC9-201ENST00000303450 ZNF317Q96PQ6 595 aaPredicted RBP22.93■■□□□ 1.26
HOXC9-201ENST00000303450 EBF4Q9BQW3 602 aa22.93■■□□□ 1.26
HOXC9-201ENST00000303450 ZNF700Q9H0M5 742 aa22.93■■□□□ 1.26
HOXC9-201ENST00000303450 TCF7L2Q9NQB0 619 aa22.93■■□□□ 1.26
HOXC9-201ENST00000303450 EHD3Q9NZN3 535 aa22.93■■□□□ 1.26
HOXC9-201ENST00000303450 CFAP47Q6ZTR5 3102 aa22.93■■□□□ 1.26
HOXC9-201ENST00000303450 NSG1A0A0A6YYJ2 146 aa22.92■■□□□ 1.26
HOXC9-201ENST00000303450 XKP51811 444 aa22.92■■□□□ 1.26
HOXC9-201ENST00000303450 IGLV3-21P80748 117 aaPredicted RBP22.92■■□□□ 1.26
HOXC9-201ENST00000303450 LSM12Q3MHD2 195 aaKnown RBP22.92■■□□□ 1.26
HOXC9-201ENST00000303450 TICAM1Q8IUC6 712 aa22.92■■□□□ 1.26
HOXC9-201ENST00000303450 EXOSC8Q96B26 276 aaKnown RBP22.92■■□□□ 1.26
HOXC9-201ENST00000303450 RBM18Q96H35 190 aaKnown RBP22.92■■□□□ 1.26
HOXC9-201ENST00000303450 DGAT2Q96PD7 388 aa22.92■■□□□ 1.26
HOXC9-201ENST00000303450 LPAR4Q99677 370 aa22.92■■□□□ 1.26
HOXC9-201ENST00000303450 ZNF780BQ9Y6R6 833 aa22.92■■□□□ 1.26
HOXC9-201ENST00000303450 A0A1W2PQ72 361 aa22.92■■□□□ 1.26
HOXC9-201ENST00000303450 ARGFXA6NJG6 315 aa22.92■■□□□ 1.26
HOXC9-201ENST00000303450 A8MUA0 341 aa22.92■■□□□ 1.26
HOXC9-201ENST00000303450 SEC24DO94855 1032 aaPredicted RBP22.92■■□□□ 1.26
HOXC9-201ENST00000303450 RRADP55042 308 aa22.92■■□□□ 1.26
HOXC9-201ENST00000303450 PLIN5Q00G26 463 aa22.92■■□□□ 1.26
HOXC9-201ENST00000303450 PCOLCEQ15113 449 aa22.92■■□□□ 1.26
HOXC9-201ENST00000303450 PAPD4Q6PIY7 484 aaKnown RBP22.92■■□□□ 1.26
HOXC9-201ENST00000303450 FAM9CQ8IZT9 166 aa22.92■■□□□ 1.26
HOXC9-201ENST00000303450 TMEM102Q8N9M5 508 aaPredicted RBP22.92■■□□□ 1.26
HOXC9-201ENST00000303450 RFWD2Q8NHY2 731 aa22.92■■□□□ 1.26
HOXC9-201ENST00000303450 CHMP6Q96FZ7 201 aa22.92■■□□□ 1.26
HOXC9-201ENST00000303450 TUBB6Q9BUF5 446 aa22.92■■□□□ 1.26
HOXC9-201ENST00000303450 REEP4Q9H6H4 257 aa22.92■■□□□ 1.26
HOXC9-201ENST00000303450 ADAP2Q9NPF8 381 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms