RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 MCHR1Q99705 422 aa14.29□□□□□ -0.12
SCN3B-201ENST00000299333 TEX10Q9NXF1 929 aaPredicted RBP14.29□□□□□ -0.12
SCN3B-201ENST00000299333 SIRPGQ9P1W8 387 aa14.29□□□□□ -0.12
SCN3B-201ENST00000299333 CARNS1A5YM72 827 aa14.29□□□□□ -0.12
SCN3B-201ENST00000299333 OTOL1A6NHN0 477 aaPredicted RBP14.29□□□□□ -0.12
SCN3B-201ENST00000299333 M0R2N6 131 aa14.29□□□□□ -0.12
SCN3B-201ENST00000299333 SLC31A1O15431 190 aa14.29□□□□□ -0.12
SCN3B-201ENST00000299333 UPK1BO75841 260 aa14.29□□□□□ -0.12
SCN3B-201ENST00000299333 CNTN5O94779 1100 aa14.29□□□□□ -0.12
SCN3B-201ENST00000299333 S1PR1P21453 382 aa14.29□□□□□ -0.12
SCN3B-201ENST00000299333 PYCR1P32322 319 aa14.29□□□□□ -0.12
SCN3B-201ENST00000299333 NPRL3Q12980 569 aa14.29□□□□□ -0.12
SCN3B-201ENST00000299333 RFTN1Q14699 578 aaPredicted RBP14.29□□□□□ -0.12
SCN3B-201ENST00000299333 IGDCC3Q8IVU1 814 aa14.29□□□□□ -0.12
SCN3B-201ENST00000299333 ACBD6Q9BR61 282 aa14.29□□□□□ -0.12
SCN3B-201ENST00000299333 NPLQ9BXD5 320 aaPredicted RBP14.29□□□□□ -0.12
SCN3B-201ENST00000299333 SARDHQ9UL12 918 aa14.29□□□□□ -0.12
SCN3B-201ENST00000299333 ERVW-1Q9UQF0 538 aa14.29□□□□□ -0.12
SCN3B-201ENST00000299333 H3BMQ9 156 aa14.28□□□□□ -0.12
SCN3B-201ENST00000299333 VNN1O95497 513 aa14.28□□□□□ -0.12
SCN3B-201ENST00000299333 CCNOP22674 350 aa14.28□□□□□ -0.12
SCN3B-201ENST00000299333 ARL2P36404 184 aa14.28□□□□□ -0.12
SCN3B-201ENST00000299333 FABP6P51161 128 aa14.28□□□□□ -0.12
SCN3B-201ENST00000299333 GPR33Q49SQ1 333 aa14.28□□□□□ -0.12
SCN3B-201ENST00000299333 MLIPQ5VWP3 458 aa14.28□□□□□ -0.12
SCN3B-201ENST00000299333 CMASQ8NFW8 434 aaPredicted RBP14.28□□□□□ -0.12
SCN3B-201ENST00000299333 OR56A3Q8NH54 315 aa14.28□□□□□ -0.12
SCN3B-201ENST00000299333 COG8Q96MW5 612 aa14.28□□□□□ -0.12
SCN3B-201ENST00000299333 GPR20Q99678 358 aa14.28□□□□□ -0.12
SCN3B-201ENST00000299333 DERL2Q9GZP9 239 aa14.28□□□□□ -0.12
SCN3B-201ENST00000299333 ELOVL2Q9NXB9 296 aa14.28□□□□□ -0.12
SCN3B-201ENST00000299333 FAM53CQ9NYF3 392 aa14.28□□□□□ -0.12
SCN3B-201ENST00000299333 PLEKHM1Q9Y4G2 1056 aa14.28□□□□□ -0.12
SCN3B-201ENST00000299333 KCNC4Q03721 635 aa14.28□□□□□ -0.12
SCN3B-201ENST00000299333 CHRNA6Q15825 494 aa14.28□□□□□ -0.12
SCN3B-201ENST00000299333 PAN3Q58A45 887 aaKnown RBP14.28□□□□□ -0.12
SCN3B-201ENST00000299333 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.28□□□□□ -0.12
SCN3B-201ENST00000299333 FAM109AQ8N4B1 249 aa14.28□□□□□ -0.12
SCN3B-201ENST00000299333 OR56A1Q8NGH5 318 aa14.28□□□□□ -0.12
SCN3B-201ENST00000299333 LILRB4Q8NHJ6 448 aa14.28□□□□□ -0.12
SCN3B-201ENST00000299333 SLC5A11Q8WWX8 675 aa14.28□□□□□ -0.12
SCN3B-201ENST00000299333 MSLNLQ96KJ4 702 aa14.28□□□□□ -0.12
SCN3B-201ENST00000299333 NSUN3Q9H649 340 aaKnown RBP14.28□□□□□ -0.12
SCN3B-201ENST00000299333 NTN4Q9HB63 628 aa14.28□□□□□ -0.12
SCN3B-201ENST00000299333 EPHA6Q9UF33 1036 aa14.28□□□□□ -0.12
SCN3B-201ENST00000299333 PSAT1Q9Y617 370 aa14.28□□□□□ -0.12
SCN3B-201ENST00000299333 A0A1W2PQL4 384 aaPredicted RBP14.28□□□□□ -0.12
SCN3B-201ENST00000299333 ALDOBP05062 364 aa14.28□□□□□ -0.12
SCN3B-201ENST00000299333 RHOP08100 348 aa14.28□□□□□ -0.12
SCN3B-201ENST00000299333 CFHP08603 1231 aa14.28□□□□□ -0.12
SCN3B-201ENST00000299333 EBLN1P0CF75 366 aa14.28□□□□□ -0.12
SCN3B-201ENST00000299333 C9orf131Q5VYM1 1079 aa14.28□□□□□ -0.12
SCN3B-201ENST00000299333 TMEM205Q6UW68 189 aa14.28□□□□□ -0.12
SCN3B-201ENST00000299333 LYSMD3Q7Z3D4 306 aa14.28□□□□□ -0.12
SCN3B-201ENST00000299333 TXNDC5Q8NBS9 432 aaKnown RBP14.28□□□□□ -0.12
SCN3B-201ENST00000299333 OR8J3Q8NGG0 315 aa14.28□□□□□ -0.12
SCN3B-201ENST00000299333 GIMAP5Q96F15 307 aa14.28□□□□□ -0.12
SCN3B-201ENST00000299333 RAB11FIP5Q9BXF6 653 aa14.28□□□□□ -0.12
SCN3B-201ENST00000299333 LCMT2O60294 686 aaKnown RBP14.28□□□□□ -0.12
SCN3B-201ENST00000299333 AGTR2P50052 363 aa14.28□□□□□ -0.12
SCN3B-201ENST00000299333 LILRA4P59901 499 aa14.28□□□□□ -0.12
SCN3B-201ENST00000299333 PLPP4Q5VZY2 271 aa14.28□□□□□ -0.12
SCN3B-201ENST00000299333 C14orf80Q86SX3 495 aa14.28□□□□□ -0.12
SCN3B-201ENST00000299333 ZNF611Q8N823 705 aa14.28□□□□□ -0.12
SCN3B-201ENST00000299333 ARL14EPQ8N8R7 260 aaPredicted RBP14.28□□□□□ -0.12
SCN3B-201ENST00000299333 PHOSPHO1Q8TCT1 267 aa14.28□□□□□ -0.12
SCN3B-201ENST00000299333 SLC38A3Q99624 504 aa14.28□□□□□ -0.12
SCN3B-201ENST00000299333 PIP5K1AQ99755 562 aa14.28□□□□□ -0.12
SCN3B-201ENST00000299333 SEZ6LQ9BYH1 1024 aa14.28□□□□□ -0.12
SCN3B-201ENST00000299333 ST6GALNAC4Q9H4F1 302 aa14.28□□□□□ -0.12
SCN3B-201ENST00000299333 DHDHQ9UQ10 334 aa14.28□□□□□ -0.12
SCN3B-201ENST00000299333 HEBP2Q9Y5Z4 205 aa14.28□□□□□ -0.12
SCN3B-201ENST00000299333 CFAP20Q9Y6A4 193 aaKnown RBP14.28□□□□□ -0.12
SCN3B-201ENST00000299333 SMIM35A0A1B0GVV1 85 aa14.28□□□□□ -0.12
SCN3B-201ENST00000299333 RAD51DO75771 328 aa14.28□□□□□ -0.12
SCN3B-201ENST00000299333 PDYNP01213 254 aa14.28□□□□□ -0.12
SCN3B-201ENST00000299333 MYF6P23409 242 aa14.28□□□□□ -0.12
SCN3B-201ENST00000299333 PRKCZQ05513 592 aa14.28□□□□□ -0.12
SCN3B-201ENST00000299333 PTCHD3Q3KNS1 767 aa14.28□□□□□ -0.12
SCN3B-201ENST00000299333 PIWIL3Q7Z3Z3 882 aaKnown RBP14.28□□□□□ -0.12
SCN3B-201ENST00000299333 ELP5Q8TE02 316 aa14.28□□□□□ -0.12
SCN3B-201ENST00000299333 GLYATL2Q8WU03 294 aa14.28□□□□□ -0.12
SCN3B-201ENST00000299333 ACSL6Q9UKU0 697 aa14.28□□□□□ -0.12
SCN3B-201ENST00000299333 MDFIC2A0A1B0GVS7 189 aa14.27□□□□□ -0.12
SCN3B-201ENST00000299333 ICMTO60725 284 aa14.27□□□□□ -0.12
SCN3B-201ENST00000299333 SC5DO75845 299 aa14.27□□□□□ -0.12
SCN3B-201ENST00000299333 PLGP00747 810 aaPredicted RBP14.27□□□□□ -0.12
SCN3B-201ENST00000299333 G0S2P27469 103 aa14.27□□□□□ -0.12
SCN3B-201ENST00000299333 HTR1EP28566 365 aa14.27□□□□□ -0.12
SCN3B-201ENST00000299333 KRTCAP2Q8N6L1 136 aa14.27□□□□□ -0.12
SCN3B-201ENST00000299333 OR2T33Q8NG76 320 aa14.27□□□□□ -0.12
SCN3B-201ENST00000299333 OR14A2Q96R54 314 aa14.27□□□□□ -0.12
SCN3B-201ENST00000299333 POLDIP3Q9BY77 421 aaKnown RBP14.27□□□□□ -0.12
SCN3B-201ENST00000299333 KCTD3Q9Y597 815 aa14.27□□□□□ -0.12
SCN3B-201ENST00000299333 PCDHA2Q9Y5H9 948 aa14.27□□□□□ -0.12
SCN3B-201ENST00000299333 PCDHAC2Q9Y5I4 1007 aa14.27□□□□□ -0.12
SCN3B-201ENST00000299333 IRS2Q9Y4H2 1338 aa14.27□□□□□ -0.12
SCN3B-201ENST00000299333 TRBV2A0A0J9YWF9 115 aa14.27□□□□□ -0.12
SCN3B-201ENST00000299333 RNF13O43567 381 aa14.27□□□□□ -0.12
SCN3B-201ENST00000299333 DDNO94850 711 aaPredicted RBP14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms