RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 SHDQ96IW2 340 aa16.81■□□□□ 0.28
PCDHA13-201ENST00000289272 METTL8Q9H825 291 aaKnown RBP16.81■□□□□ 0.28
PCDHA13-201ENST00000289272 IL36AQ9UHA7 158 aa16.81■□□□□ 0.28
PCDHA13-201ENST00000289272 EDDM13A0A1B0GTR0 161 aa16.81■□□□□ 0.28
PCDHA13-201ENST00000289272 GGT2P36268 569 aa16.81■□□□□ 0.28
PCDHA13-201ENST00000289272 SLBPQ14493 270 aaKnown RBP eCLIP16.81■□□□□ 0.28
PCDHA13-201ENST00000289272 RAB6CQ53S08 254 aa16.81■□□□□ 0.28
PCDHA13-201ENST00000289272 NOXRED1Q6NXP6 359 aa16.81■□□□□ 0.28
PCDHA13-201ENST00000289272 ZNF783Q6ZMS7 281 aa16.81■□□□□ 0.28
PCDHA13-201ENST00000289272 RAB6CQ9H0N0 254 aa16.81■□□□□ 0.28
PCDHA13-201ENST00000289272 TLR9Q9NR96 1032 aa16.81■□□□□ 0.28
PCDHA13-201ENST00000289272 KAT6AQ92794 2004 aa16.81■□□□□ 0.28
PCDHA13-201ENST00000289272 DDOSTP39656 456 aa16.81■□□□□ 0.28
PCDHA13-201ENST00000289272 UGT8Q16880 541 aa16.81■□□□□ 0.28
PCDHA13-201ENST00000289272 UBXN11Q5T124 520 aa16.81■□□□□ 0.28
PCDHA13-201ENST00000289272 PARP16Q8N5Y8 322 aa16.81■□□□□ 0.28
PCDHA13-201ENST00000289272 MAPK15Q8TD08 544 aa16.81■□□□□ 0.28
PCDHA13-201ENST00000289272 WRAP53Q9BUR4 548 aaKnown RBP16.81■□□□□ 0.28
PCDHA13-201ENST00000289272 BRINP2Q9C0B6 783 aa16.81■□□□□ 0.28
PCDHA13-201ENST00000289272 DCAF13Q9NV06 445 aaKnown RBP16.81■□□□□ 0.28
PCDHA13-201ENST00000289272 J3QLW9 94 aa16.81■□□□□ 0.28
PCDHA13-201ENST00000289272 KDELR3O43731 214 aa16.81■□□□□ 0.28
PCDHA13-201ENST00000289272 ZNF19P17023 458 aa16.81■□□□□ 0.28
PCDHA13-201ENST00000289272 EMX1Q04741 257 aaPredicted RBP16.81■□□□□ 0.28
PCDHA13-201ENST00000289272 ESCO2Q56NI9 601 aa16.81■□□□□ 0.28
PCDHA13-201ENST00000289272 DNM1P34Q6PK57 102 aa16.81■□□□□ 0.28
PCDHA13-201ENST00000289272 C14orf80Q86SX3 495 aa16.81■□□□□ 0.28
PCDHA13-201ENST00000289272 BEX2Q9BXY8 128 aa16.81■□□□□ 0.28
PCDHA13-201ENST00000289272 ARHGAP39Q9C0H5 1083 aa16.81■□□□□ 0.28
PCDHA13-201ENST00000289272 PCDH10Q9P2E7 1040 aa16.81■□□□□ 0.28
PCDHA13-201ENST00000289272 MED31Q9Y3C7 131 aa16.81■□□□□ 0.28
PCDHA13-201ENST00000289272 A0A1W2PQL4 384 aaPredicted RBP16.8■□□□□ 0.28
PCDHA13-201ENST00000289272 A0A1W2PRU2 124 aa16.8■□□□□ 0.28
PCDHA13-201ENST00000289272 ZNF623O75123 536 aa16.8■□□□□ 0.28
PCDHA13-201ENST00000289272 SOX30O94993 753 aa16.8■□□□□ 0.28
PCDHA13-201ENST00000289272 DIRAS1O95057 198 aa16.8■□□□□ 0.28
PCDHA13-201ENST00000289272 HTR1AP08908 422 aa16.8■□□□□ 0.28
PCDHA13-201ENST00000289272 ALPIP09923 528 aa16.8■□□□□ 0.28
PCDHA13-201ENST00000289272 MLLT3P42568 568 aaPredicted RBP16.8■□□□□ 0.28
PCDHA13-201ENST00000289272 UPP1Q16831 310 aa16.8■□□□□ 0.28
PCDHA13-201ENST00000289272 LDLRAD1Q5T700 205 aa16.8■□□□□ 0.28
PCDHA13-201ENST00000289272 SERINC5Q86VE9 423 aa16.8■□□□□ 0.28
PCDHA13-201ENST00000289272 GHDCQ8N2G8 530 aa16.8■□□□□ 0.28
PCDHA13-201ENST00000289272 CADM2Q8N3J6 435 aa16.8■□□□□ 0.28
PCDHA13-201ENST00000289272 METTL21AQ8WXB1 218 aa16.8■□□□□ 0.28
PCDHA13-201ENST00000289272 NUS1Q96E22 293 aa16.8■□□□□ 0.28
PCDHA13-201ENST00000289272 RNF11Q9Y3C5 154 aa16.8■□□□□ 0.28
PCDHA13-201ENST00000289272 AKAP11Q9UKA4 1901 aa16.8■□□□□ 0.28
PCDHA13-201ENST00000289272 ENPP3O14638 875 aa16.8■□□□□ 0.28
PCDHA13-201ENST00000289272 ADH6P28332 368 aa16.8■□□□□ 0.28
PCDHA13-201ENST00000289272 CD6P30203 668 aa16.8■□□□□ 0.28
PCDHA13-201ENST00000289272 SLC11A1P49279 550 aa16.8■□□□□ 0.28
PCDHA13-201ENST00000289272 ETV1P50549 477 aa16.8■□□□□ 0.28
PCDHA13-201ENST00000289272 OCLNQ16625 522 aa16.8■□□□□ 0.28
PCDHA13-201ENST00000289272 KLHL26Q53HC5 615 aa16.8■□□□□ 0.28
PCDHA13-201ENST00000289272 PLAG1Q6DJT9 500 aa16.8■□□□□ 0.28
PCDHA13-201ENST00000289272 CPNE2Q96FN4 548 aaPredicted RBP16.8■□□□□ 0.28
PCDHA13-201ENST00000289272 PBDC1Q9BVG4 233 aa16.8■□□□□ 0.28
PCDHA13-201ENST00000289272 RGCCQ9H4X1 137 aa16.8■□□□□ 0.28
PCDHA13-201ENST00000289272 PLEKHA1Q9HB21 404 aa16.8■□□□□ 0.28
PCDHA13-201ENST00000289272 C14orf166Q9Y224 244 aaKnown RBP16.8■□□□□ 0.28
PCDHA13-201ENST00000289272 SLC22A31A6NKX4 558 aa16.8■□□□□ 0.28
PCDHA13-201ENST00000289272 OR1F1O43749 312 aa16.8■□□□□ 0.28
PCDHA13-201ENST00000289272 GPR32O75388 356 aa16.8■□□□□ 0.28
PCDHA13-201ENST00000289272 SMIM18P0DKX4 95 aa16.8■□□□□ 0.28
PCDHA13-201ENST00000289272 PGAM2P15259 253 aa16.8■□□□□ 0.28
PCDHA13-201ENST00000289272 GRK5P34947 590 aa16.8■□□□□ 0.28
PCDHA13-201ENST00000289272 CDK10Q15131 360 aa16.8■□□□□ 0.28
PCDHA13-201ENST00000289272 ABCA11PQ4W5N1 156 aa16.8■□□□□ 0.28
PCDHA13-201ENST00000289272 GRHL2Q6ISB3 625 aa16.8■□□□□ 0.28
PCDHA13-201ENST00000289272 ENPP6Q6UWR7 440 aa16.8■□□□□ 0.28
PCDHA13-201ENST00000289272 RPS27LQ71UM5 84 aaKnown RBP16.8■□□□□ 0.28
PCDHA13-201ENST00000289272 OR2T33Q8NG76 320 aa16.8■□□□□ 0.28
PCDHA13-201ENST00000289272 ARL11Q969Q4 196 aa16.8■□□□□ 0.28
PCDHA13-201ENST00000289272 BCKDHAP12694 445 aa16.8■□□□□ 0.28
PCDHA13-201ENST00000289272 VAMP2P63027 116 aa16.8■□□□□ 0.28
PCDHA13-201ENST00000289272 SPCS2Q15005 226 aa16.8■□□□□ 0.28
PCDHA13-201ENST00000289272 TOMM20Q15388 145 aa16.8■□□□□ 0.28
PCDHA13-201ENST00000289272 OR2AP1Q8NGE2 309 aa16.8■□□□□ 0.28
PCDHA13-201ENST00000289272 OR2L2Q8NH16 312 aa16.8■□□□□ 0.28
PCDHA13-201ENST00000289272 IGSF5Q9NSI5 407 aa16.8■□□□□ 0.28
PCDHA13-201ENST00000289272 KLK4Q9Y5K2 254 aa16.8■□□□□ 0.28
PCDHA13-201ENST00000289272 N6AMT1Q9Y5N5 214 aa16.8■□□□□ 0.28
PCDHA13-201ENST00000289272 ZCWPW2A0A1B0GU75 182 aa16.79■□□□□ 0.28
PCDHA13-201ENST00000289272 ELOA3DA6NLF2 546 aaPredicted RBP16.79■□□□□ 0.28
PCDHA13-201ENST00000289272 RHPN2P1A8MT19 583 aa16.79■□□□□ 0.28
PCDHA13-201ENST00000289272 F5H0A9 414 aaPredicted RBP16.79■□□□□ 0.28
PCDHA13-201ENST00000289272 ALX3O95076 343 aa16.79■□□□□ 0.28
PCDHA13-201ENST00000289272 GABARAPO95166 117 aa16.79■□□□□ 0.28
PCDHA13-201ENST00000289272 OSMP13725 252 aa16.79■□□□□ 0.28
PCDHA13-201ENST00000289272 CELP19835 753 aa16.79■□□□□ 0.28
PCDHA13-201ENST00000289272 CAPN3P20807 821 aa16.79■□□□□ 0.28
PCDHA13-201ENST00000289272 PTBP1P26599 531 aaKnown RBP eCLIP16.79■□□□□ 0.28
PCDHA13-201ENST00000289272 WASP42768 502 aa16.79■□□□□ 0.28
PCDHA13-201ENST00000289272 ELOA3BQ3SY89 546 aa16.79■□□□□ 0.28
PCDHA13-201ENST00000289272 AMZ2Q86W34 360 aa16.79■□□□□ 0.28
PCDHA13-201ENST00000289272 TICAM1Q8IUC6 712 aa16.79■□□□□ 0.28
PCDHA13-201ENST00000289272 PNLDC1Q8NA58 520 aaKnown RBP16.79■□□□□ 0.28
PCDHA13-201ENST00000289272 ELOA3Q8NG57 546 aa16.79■□□□□ 0.28
PCDHA13-201ENST00000289272 CNOT9Q92600 299 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms