RNA–Protein interactions for RNA: ENST00000278572.10

RPS3-201, Transcript of ribosomal protein S3, humanhuman

TSL 3 BASIC

Gene RPS3, Length 907 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-201ENST00000278572 SDCCAG3Q96C92 435 aa13.72□□□□□ -0.21
RPS3-201ENST00000278572 MRRFQ96E11 262 aaKnown RBP13.72□□□□□ -0.21
RPS3-201ENST00000278572 TP63Q9H3D4 680 aaPredicted RBP13.72□□□□□ -0.21
RPS3-201ENST00000278572 RPF2Q9H7B2 306 aaKnown RBP13.72□□□□□ -0.21
RPS3-201ENST00000278572 PLSCR2Q9NRY7 297 aa13.72□□□□□ -0.21
RPS3-201ENST00000278572 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.72□□□□□ -0.212e-17■□□□□ 10.8
RPS3-201ENST00000278572 DMGDHQ9UI17 866 aaKnown RBP13.72□□□□□ -0.21
RPS3-201ENST00000278572 TSC22D4Q9Y3Q8 395 aa13.72□□□□□ -0.21
RPS3-201ENST00000278572 TNPO3Q9Y5L0 923 aaKnown RBP13.72□□□□□ -0.21
RPS3-201ENST00000278572 OTOGQ6ZRI0 2925 aa13.72□□□□□ -0.21
RPS3-201ENST00000278572 A0A096LPK6 155 aa13.71□□□□□ -0.21
RPS3-201ENST00000278572 H0YIV9 168 aa13.71□□□□□ -0.21
RPS3-201ENST00000278572 PLPP1O14494 284 aa13.71□□□□□ -0.21
RPS3-201ENST00000278572 ADAM10O14672 748 aa13.71□□□□□ -0.21
RPS3-201ENST00000278572 FGF17O60258 216 aa13.71□□□□□ -0.21
RPS3-201ENST00000278572 KLHL2O95198 593 aa13.71□□□□□ -0.21
RPS3-201ENST00000278572 PPIAP62937 165 aaKnown RBP13.71□□□□□ -0.21
RPS3-201ENST00000278572 IGLV3-21P80748 117 aaPredicted RBP13.71□□□□□ -0.21
RPS3-201ENST00000278572 TNFRSF17Q02223 184 aa13.71□□□□□ -0.21
RPS3-201ENST00000278572 TMEM211Q6ICI0 200 aa13.71□□□□□ -0.21
RPS3-201ENST00000278572 METTL2BQ6P1Q9 378 aaKnown RBP13.71□□□□□ -0.21
RPS3-201ENST00000278572 NCCRP1Q6ZVX7 275 aaPredicted RBP13.71□□□□□ -0.21
RPS3-201ENST00000278572 GPR180Q86V85 440 aa13.71□□□□□ -0.21
RPS3-201ENST00000278572 ZNF321PQ8N8H1 164 aa13.71□□□□□ -0.21
RPS3-201ENST00000278572 OR52N2Q8NGI0 321 aa13.71□□□□□ -0.21
RPS3-201ENST00000278572 NUBPLQ8TB37 319 aa13.71□□□□□ -0.21
RPS3-201ENST00000278572 SREK1Q8WXA9 508 aaKnown RBP13.71□□□□□ -0.21
RPS3-201ENST00000278572 TANKQ92844 425 aa13.71□□□□□ -0.21
RPS3-201ENST00000278572 ANKRD9Q96BM1 317 aaPredicted RBP13.71□□□□□ -0.21
RPS3-201ENST00000278572 RBM18Q96H35 190 aaKnown RBP13.71□□□□□ -0.21
RPS3-201ENST00000278572 MTERF1Q99551 399 aaKnown RBP13.71□□□□□ -0.21
RPS3-201ENST00000278572 FAM173AQ9BQD7 235 aa13.71□□□□□ -0.21
RPS3-201ENST00000278572 PELOQ9BRX2 385 aaKnown RBP13.71□□□□□ -0.21
RPS3-201ENST00000278572 SACM1LQ9NTJ5 587 aa13.71□□□□□ -0.21
RPS3-201ENST00000278572 DEPPQ9NTK1 212 aa13.71□□□□□ -0.21
RPS3-201ENST00000278572 LYARQ9NX58 379 aaKnown RBP13.71□□□□□ -0.21
RPS3-201ENST00000278572 MTRF1LQ9UGC7 380 aaKnown RBP13.71□□□□□ -0.21
RPS3-201ENST00000278572 POLQO75417 2590 aa13.71□□□□□ -0.22
RPS3-201ENST00000278572 FAM166BA8MTA8 275 aa13.7□□□□□ -0.22
RPS3-201ENST00000278572 KLK8O60259 260 aa13.7□□□□□ -0.22
RPS3-201ENST00000278572 ETHE1O95571 254 aa13.7□□□□□ -0.22
RPS3-201ENST00000278572 P04436 131 aa13.7□□□□□ -0.22
RPS3-201ENST00000278572 CTAGE8P0CG41 777 aa13.7□□□□□ -0.22
RPS3-201ENST00000278572 PTX3P26022 381 aaPredicted RBP13.7□□□□□ -0.22
RPS3-201ENST00000278572 TYK2P29597 1187 aa13.7□□□□□ -0.22
RPS3-201ENST00000278572 RPS13P62277 151 aaKnown RBP13.7□□□□□ -0.22
RPS3-201ENST00000278572 FOLH1Q04609 750 aa13.7□□□□□ -0.22
RPS3-201ENST00000278572 GTF2H2Q13888 395 aa13.7□□□□□ -0.22
RPS3-201ENST00000278572 PCBP2Q15366 365 aaKnown RBP eCLIP13.7□□□□□ -0.22
RPS3-201ENST00000278572 MPEG1Q2M385 716 aa13.7□□□□□ -0.22
RPS3-201ENST00000278572 GTF2H2CQ6P1K8 395 aa13.7□□□□□ -0.22
RPS3-201ENST00000278572 CTAGE4Q8IX94 777 aa13.7□□□□□ -0.22
RPS3-201ENST00000278572 OR4N5Q8IXE1 308 aa13.7□□□□□ -0.22
RPS3-201ENST00000278572 ST13P4Q8IZP2 240 aaPredicted RBP13.7□□□□□ -0.22
RPS3-201ENST00000278572 FAM109AQ8N4B1 249 aa13.7□□□□□ -0.22
RPS3-201ENST00000278572 SLC22A8Q8TCC7 542 aa13.7□□□□□ -0.22
RPS3-201ENST00000278572 ZNF721Q8TF20 911 aa13.7□□□□□ -0.22
RPS3-201ENST00000278572 SENP5Q96HI0 755 aaPredicted RBP13.7□□□□□ -0.22
RPS3-201ENST00000278572 FBXL20Q96IG2 436 aa13.7□□□□□ -0.22
RPS3-201ENST00000278572 SCYL1Q96KG9 808 aa13.7□□□□□ -0.22
RPS3-201ENST00000278572 SORBS1Q9BX66 1292 aaKnown RBP13.7□□□□□ -0.22
RPS3-201ENST00000278572 TTTY12Q9BZ98 90 aa13.7□□□□□ -0.22
RPS3-201ENST00000278572 TRIM8Q9BZR9 551 aa13.7□□□□□ -0.22
RPS3-201ENST00000278572 TSPYL1Q9H0U9 437 aa13.7□□□□□ -0.22
RPS3-201ENST00000278572 ACSS3Q9H6R3 686 aa13.7□□□□□ -0.22
RPS3-201ENST00000278572 ZDHHC11Q9H8X9 412 aa13.7□□□□□ -0.22
RPS3-201ENST00000278572 ZDHHC18Q9NUE0 388 aa13.7□□□□□ -0.22
RPS3-201ENST00000278572 RYDENQ9NUL5 291 aaKnown RBP13.7□□□□□ -0.22
RPS3-201ENST00000278572 CPSF2Q9P2I0 782 aaKnown RBP13.7□□□□□ -0.22
RPS3-201ENST00000278572 TACC2O95359 2948 aa13.69□□□□□ -0.22
RPS3-201ENST00000278572 A0A0G2JMM0 328 aa13.69□□□□□ -0.22
RPS3-201ENST00000278572 A0A1W2PPB8 328 aa13.69□□□□□ -0.22
RPS3-201ENST00000278572 A0A1W2PRS3 328 aa13.69□□□□□ -0.22
RPS3-201ENST00000278572 HMX2A2RU54 273 aa13.69□□□□□ -0.22
RPS3-201ENST00000278572 PINLYPA6NC86 204 aa13.69□□□□□ -0.22
RPS3-201ENST00000278572 KIR3DP1A8MWS1 328 aa13.69□□□□□ -0.22
RPS3-201ENST00000278572 C19orf84I3L1E1 186 aa13.69□□□□□ -0.22
RPS3-201ENST00000278572 OR10H2O60403 315 aa13.69□□□□□ -0.22
RPS3-201ENST00000278572 PDE9AO76083 593 aa13.69□□□□□ -0.22
RPS3-201ENST00000278572 ALDOAP04075 364 aaKnown RBP13.69□□□□□ -0.22
RPS3-201ENST00000278572 IGKV3-11P04433 115 aa13.69□□□□□ -0.22
RPS3-201ENST00000278572 INHBAP08476 426 aa13.69□□□□□ -0.22
RPS3-201ENST00000278572 NR2F6P10588 404 aa13.69□□□□□ -0.22
RPS3-201ENST00000278572 ALOX15P16050 662 aaPredicted RBP13.69□□□□□ -0.22
RPS3-201ENST00000278572 CNR1P21554 472 aa13.69□□□□□ -0.22
RPS3-201ENST00000278572 ELAVL4P26378 380 aaKnown RBP13.69□□□□□ -0.22
RPS3-201ENST00000278572 SSTR2P30874 369 aa13.69□□□□□ -0.22
RPS3-201ENST00000278572 ARL1P40616 181 aaPredicted RBP13.69□□□□□ -0.22
RPS3-201ENST00000278572 CUL3Q13618 768 aa13.69□□□□□ -0.22
RPS3-201ENST00000278572 CDSNQ15517 529 aa13.69□□□□□ -0.22
RPS3-201ENST00000278572 CPSF6Q16630 551 aaKnown RBP eCLIP13.69□□□□□ -0.22
RPS3-201ENST00000278572 ZNF750Q32MQ0 723 aa13.69□□□□□ -0.22
RPS3-201ENST00000278572 CYP20A1Q6UW02 462 aa13.69□□□□□ -0.22
RPS3-201ENST00000278572 FAM47EQ6ZV65 393 aa13.69□□□□□ -0.22
RPS3-201ENST00000278572 TAOK1Q7L7X3 1001 aa13.69□□□□□ -0.22
RPS3-201ENST00000278572 GOLGA7Q7Z5G4 137 aa13.69□□□□□ -0.22
RPS3-201ENST00000278572 NUDT13Q86X67 352 aa13.69□□□□□ -0.22
RPS3-201ENST00000278572 DND1Q8IYX4 353 aaKnown RBP13.69□□□□□ -0.22
RPS3-201ENST00000278572 RNF175Q8N4F7 328 aa13.69□□□□□ -0.22
RPS3-201ENST00000278572 MNS1Q8NEH6 495 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms