RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 CTSVO60911 334 aa9.07□□□□□ -0.96
TRIM55-201ENST00000276573 MITFO75030 526 aaPredicted RBP9.07□□□□□ -0.96
TRIM55-201ENST00000276573 ERAL1O75616 437 aaKnown RBP9.07□□□□□ -0.96
TRIM55-201ENST00000276573 AIFM1O95831 613 aa9.07□□□□□ -0.96
TRIM55-201ENST00000276573 C9P02748 559 aa9.07□□□□□ -0.96
TRIM55-201ENST00000276573 ZNF888P0CJ79 500 aaPredicted RBP9.07□□□□□ -0.96
TRIM55-201ENST00000276573 TNFRSF1BP20333 461 aa9.07□□□□□ -0.96
TRIM55-201ENST00000276573 PAX7P23759 505 aa9.07□□□□□ -0.96
TRIM55-201ENST00000276573 NTSP30990 170 aa9.07□□□□□ -0.96
TRIM55-201ENST00000276573 GPC1P35052 558 aa9.07□□□□□ -0.96
TRIM55-201ENST00000276573 POLR2IP36954 125 aaKnown RBP9.07□□□□□ -0.96
TRIM55-201ENST00000276573 PIGAP37287 484 aa9.07□□□□□ -0.96
TRIM55-201ENST00000276573 BLKP51451 505 aa9.07□□□□□ -0.96
TRIM55-201ENST00000276573 NCBP2P52298 156 aaKnown RBP eCLIP9.07□□□□□ -0.96
TRIM55-201ENST00000276573 RELAQ04206 551 aa9.07□□□□□ -0.96
TRIM55-201ENST00000276573 C1orf61Q13536 156 aa9.07□□□□□ -0.96
TRIM55-201ENST00000276573 LAPTM4AQ15012 233 aa9.07□□□□□ -0.96
TRIM55-201ENST00000276573 CNPY1Q3B7I2 92 aa9.07□□□□□ -0.96
TRIM55-201ENST00000276573 SLC48A1Q6P1K1 146 aa9.07□□□□□ -0.96
TRIM55-201ENST00000276573 ARMC8Q8IUR7 673 aa9.07□□□□□ -0.96
TRIM55-201ENST00000276573 CCDC116Q8IYX3 515 aa9.07□□□□□ -0.96
TRIM55-201ENST00000276573 C8orf59Q8N0T1 100 aaPredicted RBP9.07□□□□□ -0.96
TRIM55-201ENST00000276573 SLC37A2Q8TED4 501 aa9.07□□□□□ -0.96
TRIM55-201ENST00000276573 RAB8BQ92930 207 aa9.07□□□□□ -0.96
TRIM55-201ENST00000276573 ZNF347Q96SE7 839 aa9.07□□□□□ -0.96
TRIM55-201ENST00000276573 EPYCQ99645 322 aa9.07□□□□□ -0.96
TRIM55-201ENST00000276573 MAPKAP1Q9BPZ7 522 aa9.07□□□□□ -0.96
TRIM55-201ENST00000276573 TPSD1Q9BZJ3 242 aa9.07□□□□□ -0.96
TRIM55-201ENST00000276573 HRASLS2Q9NWW9 162 aa9.07□□□□□ -0.96
TRIM55-201ENST00000276573 LYARQ9NX58 379 aaKnown RBP9.07□□□□□ -0.96
TRIM55-201ENST00000276573 MRPS17Q9Y2R5 130 aaKnown RBP9.07□□□□□ -0.96
TRIM55-201ENST00000276573 SLCO1B1Q9Y6L6 691 aa9.07□□□□□ -0.96
TRIM55-201ENST00000276573 XIRP2A4UGR9 3374 aa9.07□□□□□ -0.96
TRIM55-201ENST00000276573 FANCMQ8IYD8 2048 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 A0A0J9YVX5 310 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 KRBA1A5PL33 1030 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 FAM170BA6NMN3 283 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 METTL12A8MUP2 240 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 C5orf58C9J3I9 102 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 PRAMEF10O60809 474 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 SNRNP200O75643 2136 aaKnown RBP9.06□□□□□ -0.96
TRIM55-201ENST00000276573 SLC35G6P0C7Q6 338 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 ITGAMP11215 1152 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 CSNK2A2P19784 350 aaPredicted RBP9.06□□□□□ -0.96
TRIM55-201ENST00000276573 IGFBP5P24593 272 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 OR1E2P47887 323 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 LSSP48449 732 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 DUSP2Q05923 314 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 TP53BP2Q13625 1128 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 UBXN2BQ14CS0 331 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 MAPK11Q15759 364 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 ZNF750Q32MQ0 723 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 LEXMQ3ZCV2 418 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 RBM44Q6ZP01 1051 aaKnown RBP9.06□□□□□ -0.96
TRIM55-201ENST00000276573 DGLUCYQ7Z3D6 616 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 GALNT5Q7Z7M9 940 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 PIK3C3Q8NEB9 887 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 FAM46DQ8NEK8 389 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 SUN3Q8TAQ9 357 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 CNRIP1Q96F85 164 aaPredicted RBP9.06□□□□□ -0.96
TRIM55-201ENST00000276573 SLC6A18Q96N87 628 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 ZNF300Q96RE9 604 aaPredicted RBP9.06□□□□□ -0.96
TRIM55-201ENST00000276573 ROGDIQ9GZN7 287 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 CHRDQ9H2X0 955 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 SERHL2Q9H4I8 314 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 THSD1Q9NS62 852 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 THUMPD1Q9NXG2 353 aaKnown RBP9.06□□□□□ -0.96
TRIM55-201ENST00000276573 PSME2Q9UL46 239 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 PCDHGA8Q9Y5G5 932 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 SZT2Q5T011 3432 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 LOC105369274A0A096LPK9 316 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 LOC102723532A0A0G2JNH3 316 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 A0A1W2PPC1 479 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 TNFRSF11BO00300 401 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 VILLO15195 856 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 UGT2B11O75310 529 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 BCHEP06276 602 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 C8orf89P0DMQ9 161 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 OR12D1P0DN82 309 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 ITGA2P17301 1181 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 JUNDP17535 347 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 MATN1P21941 496 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 ELK4P28324 431 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 RRM2P31350 389 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 MPIP34949 423 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 FEN1P39748 380 aaKnown RBP9.06□□□□□ -0.96
TRIM55-201ENST00000276573 MAGEA8P43361 318 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 STARD6P59095 220 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 ISL1P61371 349 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 SNRPNP63162 240 aaKnown RBP9.06□□□□□ -0.96
TRIM55-201ENST00000276573 IL18R1Q13478 541 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 DUSP7Q16829 419 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 CYP27C1Q4G0S4 372 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 RBM48Q5RL73 367 aaKnown RBP9.06□□□□□ -0.96
TRIM55-201ENST00000276573 C6orf141Q5SZD1 244 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 ZNF691Q5VV52 312 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 PTCRAQ6ISU1 281 aaPredicted RBP9.06□□□□□ -0.96
TRIM55-201ENST00000276573 FAHD1Q6P587 224 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 BORAQ6PGQ7 559 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 TMEM64Q6YI46 380 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms