RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 ENAMQ9NRM1 1142 aa15.45■□□□□ 0.06
TPM1-201ENST00000267996 PSME2Q9UL46 239 aa15.45■□□□□ 0.06
TPM1-201ENST00000267996 PADI4Q9UM07 663 aa15.45■□□□□ 0.06
TPM1-201ENST00000267996 PLCL2Q9UPR0 1127 aa15.45■□□□□ 0.06
TPM1-201ENST00000267996 SNX8Q9Y5X2 465 aa15.45■□□□□ 0.06
TPM1-201ENST00000267996 MUC3AQ02505 3323 aa15.45■□□□□ 0.06
TPM1-201ENST00000267996 USP34Q70CQ2 3546 aa15.45■□□□□ 0.06
TPM1-201ENST00000267996 ASXL3Q9C0F0 2248 aa15.45■□□□□ 0.06
TPM1-201ENST00000267996 PRKD3O94806 890 aa15.44■□□□□ 0.06
TPM1-201ENST00000267996 SERPINA1P01009 418 aa15.44■□□□□ 0.06
TPM1-201ENST00000267996 CRATP43155 626 aa15.44■□□□□ 0.06
TPM1-201ENST00000267996 NCBP2P52298 156 aaKnown RBP eCLIP15.44■□□□□ 0.06
TPM1-201ENST00000267996 CHRNB3Q05901 458 aa15.44■□□□□ 0.06
TPM1-201ENST00000267996 DUSP2Q05923 314 aa15.44■□□□□ 0.06
TPM1-201ENST00000267996 TAF11Q15544 211 aa15.44■□□□□ 0.06
TPM1-201ENST00000267996 ATP6AP1Q15904 470 aa15.44■□□□□ 0.06
TPM1-201ENST00000267996 NKG7Q16617 165 aa15.44■□□□□ 0.06
TPM1-201ENST00000267996 CEP68Q76N32 757 aa15.44■□□□□ 0.06
TPM1-201ENST00000267996 ZBTB44Q8NCP5 570 aa15.44■□□□□ 0.06
TPM1-201ENST00000267996 OR4C6Q8NH72 309 aa15.44■□□□□ 0.06
TPM1-201ENST00000267996 FBXO30Q8TB52 745 aa15.44■□□□□ 0.06
TPM1-201ENST00000267996 PPWD1Q96BP3 646 aaKnown RBP15.44■□□□□ 0.06
TPM1-201ENST00000267996 CENPNQ96H22 339 aaPredicted RBP15.44■□□□□ 0.06
TPM1-201ENST00000267996 RNF145Q96MT1 663 aa15.44■□□□□ 0.06
TPM1-201ENST00000267996 TMEM121BQ9BXQ6 578 aaPredicted RBP15.44■□□□□ 0.06
TPM1-201ENST00000267996 STARD5Q9NSY2 213 aa15.44■□□□□ 0.06
TPM1-201ENST00000267996 RAPGEFL1Q9UHV5 662 aa15.44■□□□□ 0.06
TPM1-201ENST00000267996 CNOT11Q9UKZ1 510 aaKnown RBP15.44■□□□□ 0.06
TPM1-201ENST00000267996 FAF1Q9UNN5 650 aaPredicted RBP15.44■□□□□ 0.06
TPM1-201ENST00000267996 ENTPD4Q9Y227 616 aa15.44■□□□□ 0.06
TPM1-201ENST00000267996 DTNAQ9Y4J8 743 aa15.44■□□□□ 0.06
TPM1-201ENST00000267996 MN1Q10571 1320 aaPredicted RBP15.44■□□□□ 0.06
TPM1-201ENST00000267996 DUX1O43812 170 aa15.44■□□□□ 0.06
TPM1-201ENST00000267996 ERAL1O75616 437 aaKnown RBP15.44■□□□□ 0.06
TPM1-201ENST00000267996 ZBTB11O95625 1053 aaPredicted RBP15.44■□□□□ 0.06
TPM1-201ENST00000267996 ARAFP10398 606 aa15.44■□□□□ 0.06
TPM1-201ENST00000267996 ACADSP16219 412 aa15.44■□□□□ 0.06
TPM1-201ENST00000267996 PNLIPP16233 465 aa15.44■□□□□ 0.06
TPM1-201ENST00000267996 ATP6V1C1P21283 382 aa15.44■□□□□ 0.06
TPM1-201ENST00000267996 CD1CP29017 333 aa15.44■□□□□ 0.06
TPM1-201ENST00000267996 MAGEA8P43361 318 aa15.44■□□□□ 0.06
TPM1-201ENST00000267996 CCT3P49368 545 aaKnown RBP15.44■□□□□ 0.06
TPM1-201ENST00000267996 ZNF750Q32MQ0 723 aa15.44■□□□□ 0.06
TPM1-201ENST00000267996 GRAMD1BQ3KR37 738 aa15.44■□□□□ 0.06
TPM1-201ENST00000267996 OR52E8Q6IFG1 317 aa15.44■□□□□ 0.06
TPM1-201ENST00000267996 C6orf120Q7Z4R8 191 aa15.44■□□□□ 0.06
TPM1-201ENST00000267996 RABEPKQ7Z6M1 372 aa15.44■□□□□ 0.06
TPM1-201ENST00000267996 GATAD2AQ86YP4 633 aa15.44■□□□□ 0.06
TPM1-201ENST00000267996 PLXDC1Q8IUK5 500 aa15.44■□□□□ 0.06
TPM1-201ENST00000267996 SAMD14Q8IZD0 417 aaPredicted RBP15.44■□□□□ 0.06
TPM1-201ENST00000267996 CEP76Q8TAP6 659 aa15.44■□□□□ 0.06
TPM1-201ENST00000267996 SFXN5Q8TD22 340 aa15.44■□□□□ 0.06
TPM1-201ENST00000267996 MAL2Q969L2 176 aa15.44■□□□□ 0.06
TPM1-201ENST00000267996 AHCYL2Q96HN2 611 aaKnown RBP15.44■□□□□ 0.06
TPM1-201ENST00000267996 PYURFQ96I23 114 aa15.44■□□□□ 0.06
TPM1-201ENST00000267996 CSF3RQ99062 836 aa15.44■□□□□ 0.06
TPM1-201ENST00000267996 SEMA6AQ9H2E6 1030 aa15.44■□□□□ 0.06
TPM1-201ENST00000267996 PDE7BQ9NP56 450 aa15.44■□□□□ 0.06
TPM1-201ENST00000267996 GIMAP4Q9NUV9 329 aa15.44■□□□□ 0.06
TPM1-201ENST00000267996 SAMD4AQ9UPU9 718 aaKnown RBP15.44■□□□□ 0.06
TPM1-201ENST00000267996 NAALAD2Q9Y3Q0 740 aa15.44■□□□□ 0.06
TPM1-201ENST00000267996 MAP4K5Q9Y4K4 846 aa15.44■□□□□ 0.06
TPM1-201ENST00000267996 V9GYQ6 96 aa15.44■□□□□ 0.06
TPM1-201ENST00000267996 LY6G6EA0A0G2JKS1 128 aa15.43■□□□□ 0.06
TPM1-201ENST00000267996 ZNF860A6NHJ4 632 aa15.43■□□□□ 0.06
TPM1-201ENST00000267996 CYR61O00622 381 aa15.43■□□□□ 0.06
TPM1-201ENST00000267996 TPST1O60507 370 aa15.43■□□□□ 0.06
TPM1-201ENST00000267996 GCM2O75603 506 aaPredicted RBP15.43■□□□□ 0.06
TPM1-201ENST00000267996 ALPPL2P10696 532 aa15.43■□□□□ 0.06
TPM1-201ENST00000267996 MYF5P13349 255 aa15.43■□□□□ 0.06
TPM1-201ENST00000267996 ZNF26P17031 533 aaPredicted RBP15.43■□□□□ 0.06
TPM1-201ENST00000267996 TLX1P31314 330 aaPredicted RBP15.43■□□□□ 0.06
TPM1-201ENST00000267996 MPIP34949 423 aa15.43■□□□□ 0.06
TPM1-201ENST00000267996 MLLT3P42568 568 aaPredicted RBP15.43■□□□□ 0.06
TPM1-201ENST00000267996 CCT8P50990 548 aa15.43■□□□□ 0.06
TPM1-201ENST00000267996 SQSTM1Q13501 440 aa15.43■□□□□ 0.06
TPM1-201ENST00000267996 SPIDRQ14159 915 aa15.43■□□□□ 0.06
TPM1-201ENST00000267996 ZNF630Q2M218 657 aaPredicted RBP15.43■□□□□ 0.06
TPM1-201ENST00000267996 INAVAQ3KP66 663 aa15.43■□□□□ 0.06
TPM1-201ENST00000267996 GARNL3Q5VVW2 1013 aa15.43■□□□□ 0.06
TPM1-201ENST00000267996 ANGPTL8Q6UXH0 198 aa15.43■□□□□ 0.06
TPM1-201ENST00000267996 CBLL1Q75N03 491 aa15.43■□□□□ 0.06
TPM1-201ENST00000267996 CCDC80Q76M96 950 aa15.43■□□□□ 0.06
TPM1-201ENST00000267996 CCDC116Q8IYX3 515 aa15.43■□□□□ 0.06
TPM1-201ENST00000267996 CA13Q8N1Q1 262 aa15.43■□□□□ 0.06
TPM1-201ENST00000267996 FAM181AQ8N9Y4 354 aa15.43■□□□□ 0.06
TPM1-201ENST00000267996 OR6C4Q8NGE1 309 aa15.43■□□□□ 0.06
TPM1-201ENST00000267996 YY1AP1Q9H869 796 aa15.43■□□□□ 0.06
TPM1-201ENST00000267996 FSCN3Q9NQT6 498 aa15.43■□□□□ 0.06
TPM1-201ENST00000267996 SEMA3GQ9NS98 782 aa15.43■□□□□ 0.06
TPM1-201ENST00000267996 ZNF780BQ9Y6R6 833 aa15.43■□□□□ 0.06
TPM1-201ENST00000267996 U3KQA8 63 aa15.43■□□□□ 0.06
TPM1-201ENST00000267996 LAMA1P25391 3075 aa15.43■□□□□ 0.06
TPM1-201ENST00000267996 A0A1W2PS29 197 aa15.42■□□□□ 0.06
TPM1-201ENST00000267996 FITM1A5D6W6 292 aa15.42■□□□□ 0.06
TPM1-201ENST00000267996 PRSS23O95084 383 aa15.42■□□□□ 0.06
TPM1-201ENST00000267996 MED26O95402 600 aa15.42■□□□□ 0.06
TPM1-201ENST00000267996 CSF2RBP32927 897 aa15.42■□□□□ 0.06
TPM1-201ENST00000267996 FEN1P39748 380 aaKnown RBP15.42■□□□□ 0.06
TPM1-201ENST00000267996 CRYBA2P53672 197 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms