RNA–Protein interactions for RNA: ENST00000267935.12

COMMD4-201, Transcript of COMM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD4, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-201ENST00000267935 A0A0G2JMM0 328 aa13.12□□□□□ -0.31
COMMD4-201ENST00000267935 A0A1W2PPB8 328 aa13.12□□□□□ -0.31
COMMD4-201ENST00000267935 A0A1W2PRS3 328 aa13.12□□□□□ -0.31
COMMD4-201ENST00000267935 KIR3DP1A8MWS1 328 aa13.12□□□□□ -0.31
COMMD4-201ENST00000267935 CAPN14A8MX76 684 aa13.12□□□□□ -0.31
COMMD4-201ENST00000267935 AHRRA9YTQ3 701 aa13.12□□□□□ -0.31
COMMD4-201ENST00000267935 SYT5O00445 386 aa13.12□□□□□ -0.31
COMMD4-201ENST00000267935 DVL2O14641 736 aa13.12□□□□□ -0.31
COMMD4-201ENST00000267935 TAPBPO15533 448 aa13.12□□□□□ -0.31
COMMD4-201ENST00000267935 CCL3P10147 92 aa13.12□□□□□ -0.31
COMMD4-201ENST00000267935 STMN1P16949 149 aa13.12□□□□□ -0.31
COMMD4-201ENST00000267935 HIST1H1TP22492 207 aaPredicted RBP13.12□□□□□ -0.31
COMMD4-201ENST00000267935 UQCRC1P31930 480 aa13.12□□□□□ -0.31
COMMD4-201ENST00000267935 CASP2P42575 452 aa13.12□□□□□ -0.31
COMMD4-201ENST00000267935 SSR2P43308 183 aa13.12□□□□□ -0.31
COMMD4-201ENST00000267935 RPL21P46778 160 aaKnown RBP13.12□□□□□ -0.31
COMMD4-201ENST00000267935 STT3AP46977 705 aa13.12□□□□□ -0.31
COMMD4-201ENST00000267935 SLAMF1Q13291 335 aa13.12□□□□□ -0.31
COMMD4-201ENST00000267935 RTL6Q6ICC9 239 aa13.12□□□□□ -0.31
COMMD4-201ENST00000267935 MED27Q6P2C8 311 aa13.12□□□□□ -0.31
COMMD4-201ENST00000267935 SLC29A4Q7RTT9 530 aa13.12□□□□□ -0.31
COMMD4-201ENST00000267935 VN1R5Q7Z5H4 357 aa13.12□□□□□ -0.31
COMMD4-201ENST00000267935 TGIF2LYQ8IUE0 185 aa13.12□□□□□ -0.31
COMMD4-201ENST00000267935 KLHL7Q8IXQ5 586 aa13.12□□□□□ -0.31
COMMD4-201ENST00000267935 ZZZ3Q8IYH5 903 aa13.12□□□□□ -0.31
COMMD4-201ENST00000267935 ZNF321PQ8N8H1 164 aa13.12□□□□□ -0.31
COMMD4-201ENST00000267935 BBOF1Q8ND07 529 aa13.12□□□□□ -0.31
COMMD4-201ENST00000267935 ZNF721Q8TF20 911 aa13.12□□□□□ -0.31
COMMD4-201ENST00000267935 CMTM7Q96FZ5 175 aa13.12□□□□□ -0.31
COMMD4-201ENST00000267935 RMND5BQ96G75 393 aaPredicted RBP13.12□□□□□ -0.31
COMMD4-201ENST00000267935 PWWP2AQ96N64 755 aa13.12□□□□□ -0.31
COMMD4-201ENST00000267935 PELOQ9BRX2 385 aaKnown RBP13.12□□□□□ -0.31
COMMD4-201ENST00000267935 RPF2Q9H7B2 306 aaKnown RBP13.12□□□□□ -0.31
COMMD4-201ENST00000267935 ACKR4Q9NPB9 350 aa13.12□□□□□ -0.31
COMMD4-201ENST00000267935 CCM2LQ9NUG4 571 aaPredicted RBP13.12□□□□□ -0.31
COMMD4-201ENST00000267935 MTRF1LQ9UGC7 380 aaKnown RBP13.12□□□□□ -0.31
COMMD4-201ENST00000267935 ST6GALNAC2Q9UJ37 374 aa13.12□□□□□ -0.31
COMMD4-201ENST00000267935 FOXD3Q9UJU5 478 aaPredicted RBP13.12□□□□□ -0.31
COMMD4-201ENST00000267935 LIPGQ9Y5X9 500 aa13.12□□□□□ -0.31
COMMD4-201ENST00000267935 ABCA4P78363 2273 aa13.12□□□□□ -0.31
COMMD4-201ENST00000267935 AKAP9Q99996 3911 aa13.12□□□□□ -0.31
COMMD4-201ENST00000267935 MTORP42345 2549 aa13.11□□□□□ -0.31
COMMD4-201ENST00000267935 TP53I11O14683 189 aa13.11□□□□□ -0.31
COMMD4-201ENST00000267935 ETHE1O95571 254 aa13.11□□□□□ -0.31
COMMD4-201ENST00000267935 TBX6O95947 436 aaPredicted RBP13.11□□□□□ -0.31
COMMD4-201ENST00000267935 TGFB1P01137 390 aa13.11□□□□□ -0.31
COMMD4-201ENST00000267935 PCNAP12004 261 aa13.11□□□□□ -0.31
COMMD4-201ENST00000267935 PIGAP37287 484 aa13.11□□□□□ -0.31
COMMD4-201ENST00000267935 NR0B1P51843 470 aaKnown RBP13.11□□□□□ -0.31
COMMD4-201ENST00000267935 RAP1GDS1P52306 607 aa13.11□□□□□ -0.31
COMMD4-201ENST00000267935 DGKQP52824 942 aa13.11□□□□□ -0.31
COMMD4-201ENST00000267935 DLX5P56178 289 aa13.11□□□□□ -0.31
COMMD4-201ENST00000267935 PLIN5Q00G26 463 aa13.11□□□□□ -0.31
COMMD4-201ENST00000267935 ZNF791Q3KP31 576 aaPredicted RBP13.11□□□□□ -0.31
COMMD4-201ENST00000267935 TBCELQ5QJ74 424 aa13.11□□□□□ -0.31
COMMD4-201ENST00000267935 FBXW10Q5XX13 1052 aa13.11□□□□□ -0.31
COMMD4-201ENST00000267935 TMEM198Q66K66 360 aa13.11□□□□□ -0.31
COMMD4-201ENST00000267935 OR4C11Q6IEV9 310 aa13.11□□□□□ -0.31
COMMD4-201ENST00000267935 LRRC70Q7Z2Q7 622 aa13.11□□□□□ -0.31
COMMD4-201ENST00000267935 LIX1LQ8IVB5 337 aa13.11□□□□□ -0.31
COMMD4-201ENST00000267935 TAGAPQ8N103 731 aa13.11□□□□□ -0.31
COMMD4-201ENST00000267935 FAM13CQ8NE31 585 aa13.11□□□□□ -0.31
COMMD4-201ENST00000267935 STAG3L4Q8TBR4 150 aa13.11□□□□□ -0.31
COMMD4-201ENST00000267935 PAQR8Q8TEZ7 354 aa13.11□□□□□ -0.31
COMMD4-201ENST00000267935 ZNF473Q8WTR7 871 aaKnown RBP13.11□□□□□ -0.31
COMMD4-201ENST00000267935 PYROXD1Q8WU10 500 aa13.11□□□□□ -0.31
COMMD4-201ENST00000267935 FAM222BQ8WU58 562 aa13.11□□□□□ -0.31
COMMD4-201ENST00000267935 ESAMQ96AP7 390 aa13.11□□□□□ -0.31
COMMD4-201ENST00000267935 RGMAQ96B86 450 aa13.11□□□□□ -0.31
COMMD4-201ENST00000267935 ANKRD9Q96BM1 317 aaPredicted RBP13.11□□□□□ -0.31
COMMD4-201ENST00000267935 SPACA9Q96E40 222 aaPredicted RBP13.11□□□□□ -0.31
COMMD4-201ENST00000267935 JSRP1Q96MG2 331 aaPredicted RBP13.11□□□□□ -0.31
COMMD4-201ENST00000267935 MS4A8Q9BY19 250 aa13.11□□□□□ -0.31
COMMD4-201ENST00000267935 CD244Q9BZW8 370 aa13.11□□□□□ -0.31
COMMD4-201ENST00000267935 CXXC4Q9H2H0 198 aa13.11□□□□□ -0.31
COMMD4-201ENST00000267935 CLEC4MQ9H2X3 399 aaPredicted RBP13.11□□□□□ -0.31
COMMD4-201ENST00000267935 PHF11Q9UIL8 331 aa13.11□□□□□ -0.31
COMMD4-201ENST00000267935 PTBP2Q9UKA9 531 aaKnown RBP13.11□□□□□ -0.31
COMMD4-201ENST00000267935 RNF112Q9ULX5 631 aa13.11□□□□□ -0.31
COMMD4-201ENST00000267935 PRRC2AP48634 2157 aaKnown RBP13.11□□□□□ -0.31
COMMD4-201ENST00000267935 EFCAB8A8MWE9 144 aa13.1□□□□□ -0.31
COMMD4-201ENST00000267935 OR10H2O60403 315 aa13.1□□□□□ -0.31
COMMD4-201ENST00000267935 SEC31AO94979 1220 aaKnown RBP13.1□□□□□ -0.31
COMMD4-201ENST00000267935 IL2RAP01589 272 aa13.1□□□□□ -0.31
COMMD4-201ENST00000267935 CELA3AP09093 270 aa13.1□□□□□ -0.31
COMMD4-201ENST00000267935 CD1DP15813 335 aa13.1□□□□□ -0.31
COMMD4-201ENST00000267935 KLK2P20151 261 aa13.1□□□□□ -0.31
COMMD4-201ENST00000267935 ADH7P40394 386 aa13.1□□□□□ -0.31
COMMD4-201ENST00000267935 BUD31P41223 144 aaPredicted RBP13.1□□□□□ -0.31
COMMD4-201ENST00000267935 PAFAH1B1P43034 410 aa13.1□□□□□ -0.31
COMMD4-201ENST00000267935 PHEXP78562 749 aa13.1□□□□□ -0.31
COMMD4-201ENST00000267935 ID2Q02363 134 aa13.1□□□□□ -0.31
COMMD4-201ENST00000267935 DEPDC1Q5TB30 811 aa13.1□□□□□ -0.31
COMMD4-201ENST00000267935 MAATS1Q7Z4T9 603 aa13.1□□□□□ -0.31
COMMD4-201ENST00000267935 CAMKMTQ7Z624 323 aa13.1□□□□□ -0.31
COMMD4-201ENST00000267935 UBE3DQ7Z6J8 389 aa13.1□□□□□ -0.31
COMMD4-201ENST00000267935 GPR180Q86V85 440 aa13.1□□□□□ -0.31
COMMD4-201ENST00000267935 KIF18BQ86Y91 864 aa13.1□□□□□ -0.31
COMMD4-201ENST00000267935 PM20D2Q8IYS1 436 aa13.1□□□□□ -0.31
COMMD4-201ENST00000267935 ZBED8Q8IZ13 594 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms