RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 DUSP23Q9BVJ7 150 aa13.76□□□□□ -0.21
PDLIM2-201ENST00000265810 CCM2LQ9NUG4 571 aaPredicted RBP13.76□□□□□ -0.21
PDLIM2-201ENST00000265810 EPHA6Q9UF33 1036 aa13.76□□□□□ -0.21
PDLIM2-201ENST00000265810 CDV3Q9UKY7 258 aaKnown RBP13.76□□□□□ -0.21
PDLIM2-201ENST00000265810 KNTC1P50748 2209 aa13.76□□□□□ -0.21
PDLIM2-201ENST00000265810 PKLRP30613 574 aa13.76□□□□□ -0.21
PDLIM2-201ENST00000265810 SNAPC1Q16533 368 aa13.76□□□□□ -0.21
PDLIM2-201ENST00000265810 LINC00615Q96LM1 132 aaPredicted RBP13.76□□□□□ -0.21
PDLIM2-201ENST00000265810 WSB2Q9NYS7 404 aaPredicted RBP13.76□□□□□ -0.21
PDLIM2-201ENST00000265810 NAALAD2Q9Y3Q0 740 aa13.76□□□□□ -0.21
PDLIM2-201ENST00000265810 TRPM6Q9BX84 2022 aa13.76□□□□□ -0.21
PDLIM2-201ENST00000265810 H1F0P07305 194 aaKnown RBP13.75□□□□□ -0.21
PDLIM2-201ENST00000265810 DECR1Q16698 335 aa13.75□□□□□ -0.21
PDLIM2-201ENST00000265810 RABEPKQ7Z6M1 372 aa13.75□□□□□ -0.21
PDLIM2-201ENST00000265810 GFM1Q96RP9 751 aaKnown RBP13.75□□□□□ -0.21
PDLIM2-201ENST00000265810 C1QTNF3Q9BXJ4 246 aa13.75□□□□□ -0.21
PDLIM2-201ENST00000265810 TMEM181Q9P2C4 612 aa13.75□□□□□ -0.21
PDLIM2-201ENST00000265810 MUTYHQ9UIF7 546 aa13.75□□□□□ -0.21
PDLIM2-201ENST00000265810 ERVK-11Q9UQG0 969 aa13.75□□□□□ -0.21
PDLIM2-201ENST00000265810 MYO16Q9Y6X6 1858 aa13.75□□□□□ -0.21
PDLIM2-201ENST00000265810 UTRNP46939 3433 aa13.75□□□□□ -0.21
PDLIM2-201ENST00000265810 ANTXRLA6NF34 631 aa13.75□□□□□ -0.21
PDLIM2-201ENST00000265810 HLA-DQA2P01906 255 aa13.75□□□□□ -0.21
PDLIM2-201ENST00000265810 MERTKQ12866 999 aa13.75□□□□□ -0.21
PDLIM2-201ENST00000265810 CDC73Q6P1J9 531 aa13.75□□□□□ -0.21
PDLIM2-201ENST00000265810 IQCHQ86VS3 1027 aa13.75□□□□□ -0.21
PDLIM2-201ENST00000265810 OR52N2Q8NGI0 321 aa13.75□□□□□ -0.21
PDLIM2-201ENST00000265810 ART5Q96L15 291 aa13.75□□□□□ -0.21
PDLIM2-201ENST00000265810 ZNF570Q96NI8 536 aa13.75□□□□□ -0.21
PDLIM2-201ENST00000265810 FCRL4Q96PJ5 515 aa13.75□□□□□ -0.21
PDLIM2-201ENST00000265810 SPHK1Q9NYA1 384 aa13.75□□□□□ -0.21
PDLIM2-201ENST00000265810 ANXA8P13928 327 aa13.75□□□□□ -0.21
PDLIM2-201ENST00000265810 S100A5P33763 92 aa13.75□□□□□ -0.21
PDLIM2-201ENST00000265810 CAPGP40121 348 aa13.75□□□□□ -0.21
PDLIM2-201ENST00000265810 ST13P50502 369 aaKnown RBP13.75□□□□□ -0.21
PDLIM2-201ENST00000265810 CES4AQ5XG92 561 aa13.75□□□□□ -0.21
PDLIM2-201ENST00000265810 TP53I13Q8NBR0 393 aaPredicted RBP13.75□□□□□ -0.21
PDLIM2-201ENST00000265810 ZNF248Q8NDW4 579 aa13.75□□□□□ -0.21
PDLIM2-201ENST00000265810 OR5M3Q8NGP4 307 aa13.75□□□□□ -0.21
PDLIM2-201ENST00000265810 TESCQ96BS2 214 aa13.75□□□□□ -0.21
PDLIM2-201ENST00000265810 POLR2J3Q9H1A7 115 aaKnown RBP13.75□□□□□ -0.21
PDLIM2-201ENST00000265810 EPS8L2Q9H6S3 715 aa13.75□□□□□ -0.21
PDLIM2-201ENST00000265810 BTNL2Q9UIR0 455 aa13.75□□□□□ -0.21
PDLIM2-201ENST00000265810 ENO4A6NNW6 628 aa13.74□□□□□ -0.21
PDLIM2-201ENST00000265810 RNASET2O00584 256 aaKnown RBP13.74□□□□□ -0.21
PDLIM2-201ENST00000265810 RGNQ15493 299 aa13.74□□□□□ -0.21
PDLIM2-201ENST00000265810 TRIM61Q5EBN2 209 aa13.74□□□□□ -0.21
PDLIM2-201ENST00000265810 FUNDC1Q8IVP5 155 aa13.74□□□□□ -0.21
PDLIM2-201ENST00000265810 DTWD1Q8N5C7 304 aa13.74□□□□□ -0.21
PDLIM2-201ENST00000265810 ENDOVQ8N8Q3 282 aaKnown RBP13.74□□□□□ -0.21
PDLIM2-201ENST00000265810 GRHL3Q8TE85 626 aa13.74□□□□□ -0.21
PDLIM2-201ENST00000265810 SLC17A4Q9Y2C5 497 aa13.74□□□□□ -0.21
PDLIM2-201ENST00000265810 KLHL18O94889 574 aa13.74□□□□□ -0.21
PDLIM2-201ENST00000265810 POU6F2P78424 691 aaPredicted RBP13.74□□□□□ -0.21
PDLIM2-201ENST00000265810 RTL4Q6ZR62 310 aa13.74□□□□□ -0.21
PDLIM2-201ENST00000265810 PELI3Q8N2H9 469 aa13.74□□□□□ -0.21
PDLIM2-201ENST00000265810 TEX37Q96LM6 180 aa13.74□□□□□ -0.21
PDLIM2-201ENST00000265810 JSRP1Q96MG2 331 aaPredicted RBP13.74□□□□□ -0.21
PDLIM2-201ENST00000265810 DCUN1D5Q9BTE7 237 aa13.74□□□□□ -0.21
PDLIM2-201ENST00000265810 STRADBQ9C0K7 418 aa13.74□□□□□ -0.21
PDLIM2-201ENST00000265810 POLR1DQ9Y2S0 133 aa13.74□□□□□ -0.21
PDLIM2-201ENST00000265810 MED16Q9Y2X0 877 aa13.74□□□□□ -0.21
PDLIM2-201ENST00000265810 ZNF195O14628 629 aa13.74□□□□□ -0.21
PDLIM2-201ENST00000265810 LDB3O75112 727 aa13.74□□□□□ -0.21
PDLIM2-201ENST00000265810 ANGPTL1O95841 491 aa13.74□□□□□ -0.21
PDLIM2-201ENST00000265810 BMP1P13497 986 aa13.74□□□□□ -0.21
PDLIM2-201ENST00000265810 GGT1P19440 569 aa13.74□□□□□ -0.21
PDLIM2-201ENST00000265810 RNF144AP50876 292 aaPredicted RBP13.74□□□□□ -0.21
PDLIM2-201ENST00000265810 ENPP2Q13822 863 aa13.74□□□□□ -0.21
PDLIM2-201ENST00000265810 UGT3A2Q3SY77 523 aa13.74□□□□□ -0.21
PDLIM2-201ENST00000265810 MFSD9Q8NBP5 474 aa13.74□□□□□ -0.21
PDLIM2-201ENST00000265810 NUDT8Q8WV74 236 aa13.74□□□□□ -0.21
PDLIM2-201ENST00000265810 RIT1Q92963 219 aa13.74□□□□□ -0.21
PDLIM2-201ENST00000265810 MYDGFQ969H8 173 aa13.74□□□□□ -0.21
PDLIM2-201ENST00000265810 MS4A8Q9BY19 250 aa13.74□□□□□ -0.21
PDLIM2-201ENST00000265810 ANK1P16157 1881 aa13.74□□□□□ -0.21
PDLIM2-201ENST00000265810 PRAMEF33A0A0G2JMD5 474 aa13.74□□□□□ -0.21
PDLIM2-201ENST00000265810 LYNP07948 512 aa13.74□□□□□ -0.21
PDLIM2-201ENST00000265810 FCARP24071 287 aa13.74□□□□□ -0.21
PDLIM2-201ENST00000265810 ACADLP28330 430 aa13.74□□□□□ -0.21
PDLIM2-201ENST00000265810 CA5AP35218 305 aa13.74□□□□□ -0.21
PDLIM2-201ENST00000265810 REEP5Q00765 189 aa13.74□□□□□ -0.21
PDLIM2-201ENST00000265810 CBLBQ13191 982 aa13.74□□□□□ -0.21
PDLIM2-201ENST00000265810 NR0B2Q15466 257 aa13.74□□□□□ -0.21
PDLIM2-201ENST00000265810 NSDHLQ15738 373 aa13.74□□□□□ -0.21
PDLIM2-201ENST00000265810 SFT2D3Q587I9 215 aa13.74□□□□□ -0.21
PDLIM2-201ENST00000265810 RUNDC3AQ59EK9 446 aa13.74□□□□□ -0.21
PDLIM2-201ENST00000265810 XKR7Q5GH72 579 aa13.74□□□□□ -0.21
PDLIM2-201ENST00000265810 EPHX4Q8IUS5 362 aa13.74□□□□□ -0.21
PDLIM2-201ENST00000265810 DPP10Q8N608 796 aa13.74□□□□□ -0.21
PDLIM2-201ENST00000265810 OR9A2Q8NGT5 310 aa13.74□□□□□ -0.21
PDLIM2-201ENST00000265810 VWCEQ96DN2 955 aa13.74□□□□□ -0.21
PDLIM2-201ENST00000265810 MAP3K3Q99759 626 aa13.74□□□□□ -0.21
PDLIM2-201ENST00000265810 DOHHQ9BU89 302 aa13.74□□□□□ -0.21
PDLIM2-201ENST00000265810 GAREM1Q9H706 876 aa13.74□□□□□ -0.21
PDLIM2-201ENST00000265810 EXO5Q9H790 373 aa13.74□□□□□ -0.21
PDLIM2-201ENST00000265810 C11orf16Q9NQ32 467 aa13.74□□□□□ -0.21
PDLIM2-201ENST00000265810 CCKBRP32239 447 aa13.73□□□□□ -0.21
PDLIM2-201ENST00000265810 RPL5P46777 297 aaKnown RBP13.73□□□□□ -0.21
PDLIM2-201ENST00000265810 NR1H2P55055 460 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms