RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 ANKRD26P1Q6NSI1 321 aa6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 ASB18Q6ZVZ8 466 aa6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 PAGE2Q7Z2X7 111 aa6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 APLFQ8IW19 511 aaPredicted RBP6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 ZNF595Q8IYB9 648 aa6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 NUDT8Q8WV74 236 aa6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 EGLN2Q96KS0 407 aa6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 IP6K3Q96PC2 410 aa6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 TSSK3Q96PN8 268 aa6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 SH3GL2Q99962 352 aa6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 TRMOQ9BU70 441 aa6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 OR8D2Q9GZM6 311 aa6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 ZNF552Q9H707 407 aaPredicted RBP6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 EML4Q9HC35 981 aaKnown RBP6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 PNPOQ9NVS9 261 aa6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 PLA2G3Q9NZ20 509 aa6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 HEY2Q9UBP5 337 aa6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 PHF11Q9UIL8 331 aa6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 HIVEP3Q5T1R4 2406 aa6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 EIF4E1BA6NMX2 242 aaKnown RBP6.77□□□□□ -1.32
DEPDC1B-201ENST00000265036 PEX11AO75192 247 aa6.77□□□□□ -1.32
DEPDC1B-201ENST00000265036 NME6O75414 186 aaPredicted RBP6.77□□□□□ -1.32
DEPDC1B-201ENST00000265036 CHEK2O96017 543 aa6.77□□□□□ -1.32
DEPDC1B-201ENST00000265036 ANXA4P09525 319 aaPredicted RBP6.77□□□□□ -1.32
DEPDC1B-201ENST00000265036 TNNI3P19429 210 aa6.77□□□□□ -1.32
DEPDC1B-201ENST00000265036 FEN1P39748 380 aaKnown RBP6.77□□□□□ -1.32
DEPDC1B-201ENST00000265036 HSD17B7P56937 341 aa6.77□□□□□ -1.32
DEPDC1B-201ENST00000265036 SLC26A5P58743 744 aa6.77□□□□□ -1.32
DEPDC1B-201ENST00000265036 DUSP2Q05923 314 aa6.77□□□□□ -1.32
DEPDC1B-201ENST00000265036 ZNF33BQ06732 778 aa6.77□□□□□ -1.32
DEPDC1B-201ENST00000265036 STX3Q13277 289 aa6.77□□□□□ -1.32
DEPDC1B-201ENST00000265036 MYBPC3Q14896 1274 aa6.77□□□□□ -1.32
DEPDC1B-201ENST00000265036 LACTB2Q53H82 288 aaPredicted RBP6.77□□□□□ -1.32
DEPDC1B-201ENST00000265036 IRAK1BP1Q5VVH5 260 aa6.77□□□□□ -1.32
DEPDC1B-201ENST00000265036 Q6ZSR9 355 aa6.77□□□□□ -1.32
DEPDC1B-201ENST00000265036 PRICKLE2Q7Z3G6 844 aa6.77□□□□□ -1.32
DEPDC1B-201ENST00000265036 GBP7Q8N8V2 638 aaPredicted RBP6.77□□□□□ -1.32
DEPDC1B-201ENST00000265036 PLPP5Q8NEB5 264 aa6.77□□□□□ -1.32
DEPDC1B-201ENST00000265036 OR6Y1Q8NGX8 325 aa6.77□□□□□ -1.32
DEPDC1B-201ENST00000265036 EXOSC8Q96B26 276 aaKnown RBP6.77□□□□□ -1.32
DEPDC1B-201ENST00000265036 ANKRD9Q96BM1 317 aaPredicted RBP6.77□□□□□ -1.32
DEPDC1B-201ENST00000265036 KLHL29Q96CT2 875 aa6.77□□□□□ -1.32
DEPDC1B-201ENST00000265036 IMMP1LQ96LU5 166 aa6.77□□□□□ -1.32
DEPDC1B-201ENST00000265036 CNPPD1Q9BV87 410 aa6.77□□□□□ -1.32
DEPDC1B-201ENST00000265036 NUF2Q9BZD4 464 aa6.77□□□□□ -1.32
DEPDC1B-201ENST00000265036 TRIM4Q9C037 500 aa6.77□□□□□ -1.32
DEPDC1B-201ENST00000265036 ZNF700Q9H0M5 742 aa6.77□□□□□ -1.32
DEPDC1B-201ENST00000265036 SLC25A18Q9H1K4 315 aa6.77□□□□□ -1.32
DEPDC1B-201ENST00000265036 ANKRA2Q9H9E1 313 aa6.77□□□□□ -1.32
DEPDC1B-201ENST00000265036 WDR41Q9HAD4 459 aa6.77□□□□□ -1.32
DEPDC1B-201ENST00000265036 LYARQ9NX58 379 aaKnown RBP6.77□□□□□ -1.32
DEPDC1B-201ENST00000265036 AHSPQ9NZD4 102 aa6.77□□□□□ -1.32
DEPDC1B-201ENST00000265036 BAIAP2L1Q9UHR4 511 aa6.77□□□□□ -1.32
DEPDC1B-201ENST00000265036 PPT2Q9UMR5 302 aa6.77□□□□□ -1.32
DEPDC1B-201ENST00000265036 SPTBN1Q01082 2364 aaKnown RBP6.77□□□□□ -1.33
DEPDC1B-201ENST00000265036 TRBV11-1A0A0K0K1C0 115 aa6.77□□□□□ -1.33
DEPDC1B-201ENST00000265036 SAGE2PA6NJ88 616 aa6.77□□□□□ -1.33
DEPDC1B-201ENST00000265036 C17orf105B2RV13 164 aa6.77□□□□□ -1.33
DEPDC1B-201ENST00000265036 BIRC5O15392 142 aa6.77□□□□□ -1.33
DEPDC1B-201ENST00000265036 AKAP10O43572 662 aa6.77□□□□□ -1.33
DEPDC1B-201ENST00000265036 OR10H2O60403 315 aa6.77□□□□□ -1.33
DEPDC1B-201ENST00000265036 HSD3B1P14060 373 aa6.77□□□□□ -1.33
DEPDC1B-201ENST00000265036 EFNA1P20827 205 aaPredicted RBP6.77□□□□□ -1.33
DEPDC1B-201ENST00000265036 IL10P22301 178 aa6.77□□□□□ -1.33
DEPDC1B-201ENST00000265036 HSD3B2P26439 372 aa6.77□□□□□ -1.33
DEPDC1B-201ENST00000265036 TLX1P31314 330 aaPredicted RBP6.77□□□□□ -1.33
DEPDC1B-201ENST00000265036 TSFMP43897 325 aaKnown RBP6.77□□□□□ -1.33
DEPDC1B-201ENST00000265036 MRPS35P82673 323 aaKnown RBP6.77□□□□□ -1.33
DEPDC1B-201ENST00000265036 PTGR1Q14914 329 aa6.77□□□□□ -1.33
DEPDC1B-201ENST00000265036 LTB4RQ15722 352 aa6.77□□□□□ -1.33
DEPDC1B-201ENST00000265036 UGT3A2Q3SY77 523 aa6.77□□□□□ -1.33
DEPDC1B-201ENST00000265036 NADK2Q4G0N4 442 aa6.77□□□□□ -1.33
DEPDC1B-201ENST00000265036 RFTN2Q52LD8 501 aaPredicted RBP6.77□□□□□ -1.33
DEPDC1B-201ENST00000265036 SPIN4Q56A73 249 aa6.77□□□□□ -1.33
DEPDC1B-201ENST00000265036 C10orf62Q5T681 223 aaPredicted RBP6.77□□□□□ -1.33
DEPDC1B-201ENST00000265036 VWA5B1Q5TIE3 1220 aa6.77□□□□□ -1.33
DEPDC1B-201ENST00000265036 KBTBD2Q8IY47 623 aa6.77□□□□□ -1.33
DEPDC1B-201ENST00000265036 SIMC1Q8NDZ2 872 aa6.77□□□□□ -1.33
DEPDC1B-201ENST00000265036 ADCY4Q8NFM4 1077 aa6.77□□□□□ -1.33
DEPDC1B-201ENST00000265036 ADAMTS18Q8TE60 1221 aa6.77□□□□□ -1.33
DEPDC1B-201ENST00000265036 CHTF18Q8WVB6 975 aa6.77□□□□□ -1.33
DEPDC1B-201ENST00000265036 DYDC1Q8WWB3 177 aa6.77□□□□□ -1.33
DEPDC1B-201ENST00000265036 PSMF1Q92530 271 aa6.77□□□□□ -1.33
DEPDC1B-201ENST00000265036 NCLNQ969V3 563 aa6.77□□□□□ -1.33
DEPDC1B-201ENST00000265036 TM4SF18Q96CE8 201 aa6.77□□□□□ -1.33
DEPDC1B-201ENST00000265036 TUBB6Q9BUF5 446 aa6.77□□□□□ -1.33
DEPDC1B-201ENST00000265036 FAM117AQ9C073 453 aa6.77□□□□□ -1.33
DEPDC1B-201ENST00000265036 LHPPQ9H008 270 aa6.77□□□□□ -1.33
DEPDC1B-201ENST00000265036 VIPAS39Q9H9C1 493 aa6.77□□□□□ -1.33
DEPDC1B-201ENST00000265036 KCNK13Q9HB14 408 aa6.77□□□□□ -1.33
DEPDC1B-201ENST00000265036 LRTM1Q9HBL6 345 aa6.77□□□□□ -1.33
DEPDC1B-201ENST00000265036 SLCO1B3Q9NPD5 702 aa6.77□□□□□ -1.33
DEPDC1B-201ENST00000265036 PFDN4Q9NQP4 134 aa6.77□□□□□ -1.33
DEPDC1B-201ENST00000265036 MMACHCQ9Y4U1 282 aa6.77□□□□□ -1.33
DEPDC1B-201ENST00000265036 CCL27Q9Y4X3 112 aa6.77□□□□□ -1.33
DEPDC1B-201ENST00000265036 CLCA3PQ9Y6N3 262 aa6.77□□□□□ -1.33
DEPDC1B-201ENST00000265036 DIDO1Q9BTC0 2240 aaKnown RBP6.77□□□□□ -1.33
DEPDC1B-201ENST00000265036 MED12Q93074 2177 aa6.77□□□□□ -1.33
DEPDC1B-201ENST00000265036 DNAJC13O75165 2243 aa6.77□□□□□ -1.33
DEPDC1B-201ENST00000265036 ZNF407Q9C0G0 2248 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms