RNA–Protein interactions for RNA: ENST00000263309.7

CLNS1A-201, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-201ENST00000263309 ADNP2Q6IQ32 1131 aa11.79□□□□□ -0.52
CLNS1A-201ENST00000263309 GALNT18Q6P9A2 607 aa11.79□□□□□ -0.52
CLNS1A-201ENST00000263309 PAPD4Q6PIY7 484 aaKnown RBP11.79□□□□□ -0.52
CLNS1A-201ENST00000263309 KIRREL2Q6UWL6 708 aa11.79□□□□□ -0.52
CLNS1A-201ENST00000263309 UBE3DQ7Z6J8 389 aa11.79□□□□□ -0.52
CLNS1A-201ENST00000263309 ST13P4Q8IZP2 240 aaPredicted RBP11.79□□□□□ -0.52
CLNS1A-201ENST00000263309 RNF175Q8N4F7 328 aa11.79□□□□□ -0.52
CLNS1A-201ENST00000263309 ZADH2Q8N4Q0 377 aa11.79□□□□□ -0.52
CLNS1A-201ENST00000263309 OR11G2Q8NGC1 345 aa11.79□□□□□ -0.52
CLNS1A-201ENST00000263309 ZFP28Q8NHY6 868 aa11.79□□□□□ -0.52
CLNS1A-201ENST00000263309 EXTL1Q92935 676 aa11.79□□□□□ -0.52
CLNS1A-201ENST00000263309 RIT1Q92963 219 aa11.79□□□□□ -0.52
CLNS1A-201ENST00000263309 MTERF3Q96E29 417 aa11.79□□□□□ -0.52
CLNS1A-201ENST00000263309 THOC3Q96J01 351 aaKnown RBP11.79□□□□□ -0.52
CLNS1A-201ENST00000263309 HBEGFQ99075 208 aa11.79□□□□□ -0.52
CLNS1A-201ENST00000263309 DEFB126Q9BYW3 111 aa11.79□□□□□ -0.52
CLNS1A-201ENST00000263309 NOP53Q9NZM5 478 aaKnown RBP11.79□□□□□ -0.52
CLNS1A-201ENST00000263309 C5AR2Q9P296 337 aa11.79□□□□□ -0.52
CLNS1A-201ENST00000263309 ZNF225Q9UK10 706 aa11.79□□□□□ -0.52
CLNS1A-201ENST00000263309 PCDHGB4Q9UN71 923 aa11.79□□□□□ -0.52
CLNS1A-201ENST00000263309 ASB4Q9Y574 426 aa11.79□□□□□ -0.52
CLNS1A-201ENST00000263309 PCDHA9Q9Y5H5 950 aa11.79□□□□□ -0.52
CLNS1A-201ENST00000263309 HS3ST3B1Q9Y662 390 aa11.79□□□□□ -0.52
CLNS1A-201ENST00000263309 TCRBV16S1A1N1A0A5B0 115 aa11.78□□□□□ -0.52
CLNS1A-201ENST00000263309 A8MUI8 341 aa11.78□□□□□ -0.52
CLNS1A-201ENST00000263309 CYR61O00622 381 aa11.78□□□□□ -0.52
CLNS1A-201ENST00000263309 SOCS6O14544 535 aa11.78□□□□□ -0.52
CLNS1A-201ENST00000263309 EEDO75530 441 aaKnown RBP11.78□□□□□ -0.52
CLNS1A-201ENST00000263309 ZFAND5O76080 213 aa11.78□□□□□ -0.52
CLNS1A-201ENST00000263309 SLITRK5O94991 958 aa11.78□□□□□ -0.52
CLNS1A-201ENST00000263309 B3GALT4O96024 378 aa11.78□□□□□ -0.52
CLNS1A-201ENST00000263309 SLC35E2P0CK97 266 aa11.78□□□□□ -0.52
CLNS1A-201ENST00000263309 TROVE2P10155 538 aaKnown RBP eCLIP11.78□□□□□ -0.52
CLNS1A-201ENST00000263309 KITP10721 976 aa11.78□□□□□ -0.52
CLNS1A-201ENST00000263309 LBPP18428 481 aa11.78□□□□□ -0.52
CLNS1A-201ENST00000263309 MAOAP21397 527 aa11.78□□□□□ -0.52
CLNS1A-201ENST00000263309 TPP2P29144 1249 aaPredicted RBP11.78□□□□□ -0.52
CLNS1A-201ENST00000263309 GALNSP34059 522 aa11.78□□□□□ -0.52
CLNS1A-201ENST00000263309 FOXA1P55317 472 aa11.78□□□□□ -0.52
CLNS1A-201ENST00000263309 SOX8P57073 446 aa11.78□□□□□ -0.52
CLNS1A-201ENST00000263309 WDR4P57081 412 aaKnown RBP11.78□□□□□ -0.52
CLNS1A-201ENST00000263309 RPL38P63173 70 aaKnown RBP11.78□□□□□ -0.52
CLNS1A-201ENST00000263309 IRX1P78414 480 aaPredicted RBP11.78□□□□□ -0.52
CLNS1A-201ENST00000263309 BTG2P78543 158 aa11.78□□□□□ -0.52
CLNS1A-201ENST00000263309 RHAGQ02094 409 aa11.78□□□□□ -0.52
CLNS1A-201ENST00000263309 TBL3Q12788 808 aaKnown RBP11.78□□□□□ -0.52
CLNS1A-201ENST00000263309 MPP2Q14168 576 aa11.78□□□□□ -0.52
CLNS1A-201ENST00000263309 PDCD2Q16342 344 aaPredicted RBP11.78□□□□□ -0.52
CLNS1A-201ENST00000263309 CRB2Q5IJ48 1285 aa11.78□□□□□ -0.52
CLNS1A-201ENST00000263309 TCHHL1Q5QJ38 904 aaPredicted RBP11.78□□□□□ -0.52
CLNS1A-201ENST00000263309 PLAG1Q6DJT9 500 aa11.78□□□□□ -0.52
CLNS1A-201ENST00000263309 SPATA19Q7Z5L4 167 aa11.78□□□□□ -0.52
CLNS1A-201ENST00000263309 PPP1R32Q7Z5V6 425 aa11.78□□□□□ -0.52
CLNS1A-201ENST00000263309 CLNKQ7Z7G1 428 aa11.78□□□□□ -0.52
CLNS1A-201ENST00000263309 ZNF781Q8N8C0 355 aa11.78□□□□□ -0.52
CLNS1A-201ENST00000263309 C9orf43Q8TAL5 461 aaPredicted RBP11.78□□□□□ -0.52
CLNS1A-201ENST00000263309 ADAMTS17Q8TE56 1095 aa11.78□□□□□ -0.52
CLNS1A-201ENST00000263309 C16orf78Q8WTQ4 265 aa11.78□□□□□ -0.52
CLNS1A-201ENST00000263309 KLHL29Q96CT2 875 aa11.78□□□□□ -0.52
CLNS1A-201ENST00000263309 VMP1Q96GC9 406 aa11.78□□□□□ -0.52
CLNS1A-201ENST00000263309 APIPQ96GX9 242 aa11.78□□□□□ -0.52
CLNS1A-201ENST00000263309 C7orf26Q96N11 449 aa11.78□□□□□ -0.52
CLNS1A-201ENST00000263309 SORBS1Q9BX66 1292 aaKnown RBP11.78□□□□□ -0.52
CLNS1A-201ENST00000263309 SYNPO2LQ9H987 977 aa11.78□□□□□ -0.52
CLNS1A-201ENST00000263309 LANCL2Q9NS86 450 aa11.78□□□□□ -0.52
CLNS1A-201ENST00000263309 EHD3Q9NZN3 535 aa11.78□□□□□ -0.52
CLNS1A-201ENST00000263309 KCMF1Q9P0J7 381 aa11.78□□□□□ -0.52
CLNS1A-201ENST00000263309 ADAM21Q9UKJ8 722 aa11.78□□□□□ -0.52
CLNS1A-201ENST00000263309 UTS2RQ9UKP6 389 aa11.78□□□□□ -0.52
CLNS1A-201ENST00000263309 TRIM33Q9UPN9 1127 aa11.78□□□□□ -0.52
CLNS1A-201ENST00000263309 DLGAP4Q9Y2H0 992 aa11.78□□□□□ -0.52
CLNS1A-201ENST00000263309 ATG4BQ9Y4P1 393 aa11.78□□□□□ -0.52
CLNS1A-201ENST00000263309 PCDHGA9Q9Y5G4 932 aaKnown RBP11.78□□□□□ -0.52
CLNS1A-201ENST00000263309 ASH1LQ9NR48 2969 aaKnown RBP11.77□□□□□ -0.52
CLNS1A-201ENST00000263309 A8MUA0 341 aa11.77□□□□□ -0.53
CLNS1A-201ENST00000263309 CAPN14A8MX76 684 aa11.77□□□□□ -0.53
CLNS1A-201ENST00000263309 C17orf105B2RV13 164 aa11.77□□□□□ -0.53
CLNS1A-201ENST00000263309 NPIPB8E9PQR5 432 aa11.77□□□□□ -0.53
CLNS1A-201ENST00000263309 LDB3O75112 727 aa11.77□□□□□ -0.53
CLNS1A-201ENST00000263309 JRKO75564 520 aa11.77□□□□□ -0.53
CLNS1A-201ENST00000263309 SEC24DO94855 1032 aaPredicted RBP11.77□□□□□ -0.53
CLNS1A-201ENST00000263309 ETHE1O95571 254 aa11.77□□□□□ -0.53
CLNS1A-201ENST00000263309 PRPS1L1P21108 318 aa11.77□□□□□ -0.53
CLNS1A-201ENST00000263309 NT5EP21589 574 aa11.77□□□□□ -0.53
CLNS1A-201ENST00000263309 STT3AP46977 705 aa11.77□□□□□ -0.53
CLNS1A-201ENST00000263309 STX1BP61266 288 aa11.77□□□□□ -0.53
CLNS1A-201ENST00000263309 FOLH1Q04609 750 aa11.77□□□□□ -0.53
CLNS1A-201ENST00000263309 EMX2Q04743 252 aa11.77□□□□□ -0.53
CLNS1A-201ENST00000263309 GABPB1Q06547 395 aaPredicted RBP11.77□□□□□ -0.53
CLNS1A-201ENST00000263309 SRSF6Q13247 344 aaKnown RBP11.77□□□□□ -0.53
CLNS1A-201ENST00000263309 MYBPC3Q14896 1274 aa11.77□□□□□ -0.53
CLNS1A-201ENST00000263309 MEP1AQ16819 746 aa11.77□□□□□ -0.53
CLNS1A-201ENST00000263309 LSM12Q3MHD2 195 aaKnown RBP11.77□□□□□ -0.53
CLNS1A-201ENST00000263309 VWA5B1Q5TIE3 1220 aa11.77□□□□□ -0.53
CLNS1A-201ENST00000263309 MRM1Q6IN84 353 aaKnown RBP11.77□□□□□ -0.53
CLNS1A-201ENST00000263309 ISLR2Q6UXK2 745 aa11.77□□□□□ -0.53
CLNS1A-201ENST00000263309 ZNF793Q6ZN11 406 aa11.77□□□□□ -0.53
CLNS1A-201ENST00000263309 SLC29A4Q7RTT9 530 aa11.77□□□□□ -0.53
CLNS1A-201ENST00000263309 DTWD1Q8N5C7 304 aa11.77□□□□□ -0.53
CLNS1A-201ENST00000263309 TEX19Q8NA77 164 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms