RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.37■■□□□ 1.01
LSM4-201ENST00000252816 V9GYY5 206 aaPredicted RBP21.37■■□□□ 1.01
LSM4-201ENST00000252816 USP9YO00507 2555 aaPredicted RBP21.37■■□□□ 1.01
LSM4-201ENST00000252816 GLOD5A6NK44 160 aa21.36■■□□□ 1.01
LSM4-201ENST00000252816 CDK2AP1O14519 115 aa21.36■■□□□ 1.01
LSM4-201ENST00000252816 CDH16O75309 829 aa21.36■■□□□ 1.01
LSM4-201ENST00000252816 ZFAND5O76080 213 aa21.36■■□□□ 1.01
LSM4-201ENST00000252816 AIFM1O95831 613 aa21.36■■□□□ 1.01
LSM4-201ENST00000252816 PROCP04070 461 aa21.36■■□□□ 1.01
LSM4-201ENST00000252816 KLK1P06870 262 aa21.36■■□□□ 1.01
LSM4-201ENST00000252816 CD46P15529 392 aa21.36■■□□□ 1.01
LSM4-201ENST00000252816 MST1P26927 711 aa21.36■■□□□ 1.01
LSM4-201ENST00000252816 TRHRP34981 398 aaPredicted RBP21.36■■□□□ 1.01
LSM4-201ENST00000252816 ZYG11AQ6WRX3 759 aa21.36■■□□□ 1.01
LSM4-201ENST00000252816 DGAT2L6Q6ZPD8 337 aa21.36■■□□□ 1.01
LSM4-201ENST00000252816 GPRIN3Q6ZVF9 776 aa21.36■■□□□ 1.01
LSM4-201ENST00000252816 METTL4Q8N3J2 472 aa21.36■■□□□ 1.01
LSM4-201ENST00000252816 SLC2A12Q8TD20 617 aa21.36■■□□□ 1.01
LSM4-201ENST00000252816 AENQ8WTP8 325 aaKnown RBP21.36■■□□□ 1.01
LSM4-201ENST00000252816 SREK1Q8WXA9 508 aaKnown RBP21.36■■□□□ 1.01
LSM4-201ENST00000252816 PPWD1Q96BP3 646 aaKnown RBP21.36■■□□□ 1.01
LSM4-201ENST00000252816 HBEGFQ99075 208 aa21.36■■□□□ 1.01
LSM4-201ENST00000252816 C12orf65Q9H3J6 166 aaKnown RBP21.36■■□□□ 1.01
LSM4-201ENST00000252816 SNX6Q9UNH7 406 aa21.36■■□□□ 1.01
LSM4-201ENST00000252816 SLC12A4Q9UP95 1085 aa21.36■■□□□ 1.01
LSM4-201ENST00000252816 MANBAO00462 879 aa21.35■■□□□ 1.01
LSM4-201ENST00000252816 FCHO1O14526 889 aa21.35■■□□□ 1.01
LSM4-201ENST00000252816 AGFG2O95081 481 aa21.35■■□□□ 1.01
LSM4-201ENST00000252816 SP1P08047 785 aa21.35■■□□□ 1.01
LSM4-201ENST00000252816 NR2F6P10588 404 aa21.35■■□□□ 1.01
LSM4-201ENST00000252816 CRHR1P34998 444 aa21.35■■□□□ 1.01
LSM4-201ENST00000252816 STT3AP46977 705 aa21.35■■□□□ 1.01
LSM4-201ENST00000252816 CYB561P49447 251 aa21.35■■□□□ 1.01
LSM4-201ENST00000252816 HLCSP50747 726 aa21.35■■□□□ 1.01
LSM4-201ENST00000252816 ELOAQ14241 798 aaKnown RBP21.35■■□□□ 1.01
LSM4-201ENST00000252816 HORMAD2Q8N7B1 307 aa21.35■■□□□ 1.01
LSM4-201ENST00000252816 C5orf34Q96MH7 638 aa21.35■■□□□ 1.01
LSM4-201ENST00000252816 DGAT2Q96PD7 388 aa21.35■■□□□ 1.01
LSM4-201ENST00000252816 GSTO2Q9H4Y5 243 aa21.35■■□□□ 1.01
LSM4-201ENST00000252816 BRF2Q9HAW0 419 aa21.35■■□□□ 1.01
LSM4-201ENST00000252816 TEX10Q9NXF1 929 aaPredicted RBP21.35■■□□□ 1.01
LSM4-201ENST00000252816 AHSPQ9NZD4 102 aa21.35■■□□□ 1.01
LSM4-201ENST00000252816 ADAM29Q9UKF5 820 aa21.35■■□□□ 1.01
LSM4-201ENST00000252816 PLIN3O60664 434 aa21.34■■□□□ 1.01
LSM4-201ENST00000252816 ITGA10O75578 1167 aa21.34■■□□□ 1.01
LSM4-201ENST00000252816 SLC25A12O75746 678 aa21.34■■□□□ 1.01
LSM4-201ENST00000252816 WISP2O76076 250 aa21.34■■□□□ 1.01
LSM4-201ENST00000252816 GPR75O95800 540 aa21.34■■□□□ 1.01
LSM4-201ENST00000252816 MLYCDO95822 493 aa21.34■■□□□ 1.01
LSM4-201ENST00000252816 RNF224P0DH78 156 aa21.34■■□□□ 1.01
LSM4-201ENST00000252816 MYL2P10916 166 aa21.34■■□□□ 1.01
LSM4-201ENST00000252816 CCT5P48643 541 aa21.34■■□□□ 1.01
LSM4-201ENST00000252816 GALNT1Q10472 559 aaPredicted RBP21.34■■□□□ 1.01
LSM4-201ENST00000252816 TBL3Q12788 808 aaKnown RBP21.34■■□□□ 1.01
LSM4-201ENST00000252816 LCP2Q13094 533 aa21.34■■□□□ 1.01
LSM4-201ENST00000252816 SLC25A25Q6KCM7 469 aa21.34■■□□□ 1.01
LSM4-201ENST00000252816 HSDL2Q6YN16 418 aa21.34■■□□□ 1.01
LSM4-201ENST00000252816 COMMD6Q7Z4G1 85 aa21.34■■□□□ 1.01
LSM4-201ENST00000252816 GALNTL5Q7Z4T8 443 aa21.34■■□□□ 1.01
LSM4-201ENST00000252816 C4orf33Q8N1A6 199 aa21.34■■□□□ 1.01
LSM4-201ENST00000252816 DNAJB8Q8NHS0 232 aa21.34■■□□□ 1.01
LSM4-201ENST00000252816 DOK4Q8TEW6 326 aa21.34■■□□□ 1.01
LSM4-201ENST00000252816 ZNF721Q8TF20 911 aa21.34■■□□□ 1.01
LSM4-201ENST00000252816 SPTAN1Q13813 2472 aaKnown RBP21.34■■□□□ 1.01
LSM4-201ENST00000252816 TLDC2A0PJX2 215 aa21.33■■□□□ 1.01
LSM4-201ENST00000252816 HRKO00198 91 aa21.33■■□□□ 1.01
LSM4-201ENST00000252816 PGRMC2O15173 223 aa21.33■■□□□ 1.01
LSM4-201ENST00000252816 CRYABP02511 175 aaKnown RBP21.33■■□□□ 1.01
LSM4-201ENST00000252816 NUDT17P0C025 328 aa21.33■■□□□ 1.01
LSM4-201ENST00000252816 ALOX15P16050 662 aaPredicted RBP21.33■■□□□ 1.01
LSM4-201ENST00000252816 KRT4P19013 534 aa21.33■■□□□ 1.01
LSM4-201ENST00000252816 PLIN5Q00G26 463 aa21.33■■□□□ 1.01
LSM4-201ENST00000252816 SLC18A2Q05940 514 aa21.33■■□□□ 1.01
LSM4-201ENST00000252816 WDR93Q6P2C0 686 aa21.33■■□□□ 1.01
LSM4-201ENST00000252816 ZGRF1Q86YA3 2104 aa21.33■■□□□ 1.01
LSM4-201ENST00000252816 CCNYL1Q8N7R7 359 aa21.33■■□□□ 1.01
LSM4-201ENST00000252816 TMEM178AQ8NBL3 297 aa21.33■■□□□ 1.01
LSM4-201ENST00000252816 C7orf57Q8NEG2 295 aa21.33■■□□□ 1.01
LSM4-201ENST00000252816 RBM18Q96H35 190 aaKnown RBP21.33■■□□□ 1.01
LSM4-201ENST00000252816 SENP5Q96HI0 755 aaPredicted RBP21.33■■□□□ 1.01
LSM4-201ENST00000252816 MYOTQ9UBF9 498 aa21.33■■□□□ 1.01
LSM4-201ENST00000252816 ERRFI1Q9UJM3 462 aaPredicted RBP21.33■■□□□ 1.01
LSM4-201ENST00000252816 GRID1Q9ULK0 1009 aa21.33■■□□□ 1.01
LSM4-201ENST00000252816 UTP20O75691 2785 aaKnown RBP21.33■■□□□ 1
LSM4-201ENST00000252816 A0A1W2PS29 197 aa21.32■■□□□ 1
LSM4-201ENST00000252816 ARHGAP10A1A4S6 786 aa21.32■■□□□ 1
LSM4-201ENST00000252816 ESPNB1AK53 854 aa21.32■■□□□ 1
LSM4-201ENST00000252816 UBFD1O14562 309 aaKnown RBP21.32■■□□□ 1
LSM4-201ENST00000252816 COPEO14579 308 aa21.32■■□□□ 1
LSM4-201ENST00000252816 OR2J2O76002 312 aa21.32■■□□□ 1
LSM4-201ENST00000252816 KRT6AP02538 564 aa21.32■■□□□ 1
LSM4-201ENST00000252816 KRT6BP04259 564 aa21.32■■□□□ 1
LSM4-201ENST00000252816 COX7A2P14406 83 aa21.32■■□□□ 1
LSM4-201ENST00000252816 CHN1P15882 459 aa21.32■■□□□ 1
LSM4-201ENST00000252816 KRT6CP48668 564 aa21.32■■□□□ 1
LSM4-201ENST00000252816 HTR6P50406 440 aa21.32■■□□□ 1
LSM4-201ENST00000252816 KCNK10P57789 538 aa21.32■■□□□ 1
LSM4-201ENST00000252816 BIKQ13323 160 aa21.32■■□□□ 1
LSM4-201ENST00000252816 MAPKAPK3Q16644 382 aa21.32■■□□□ 1
LSM4-201ENST00000252816 CCDC153Q494R4 210 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms