RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 ACBD4Q8NC06 268 aa19.5■□□□□ 0.71
NEDD8-201ENST00000250495 LILRB4Q8NHJ6 448 aa19.5■□□□□ 0.71
NEDD8-201ENST00000250495 HUS1BQ8NHY5 278 aa19.5■□□□□ 0.71
NEDD8-201ENST00000250495 TANKQ92844 425 aa19.5■□□□□ 0.71
NEDD8-201ENST00000250495 SENP5Q96HI0 755 aaPredicted RBP19.5■□□□□ 0.71
NEDD8-201ENST00000250495 RPF2Q9H7B2 306 aaKnown RBP19.5■□□□□ 0.71
NEDD8-201ENST00000250495 IL1RL2Q9HB29 575 aa19.5■□□□□ 0.71
NEDD8-201ENST00000250495 PHF11Q9UIL8 331 aa19.5■□□□□ 0.71
NEDD8-201ENST00000250495 TSC22D4Q9Y3Q8 395 aa19.5■□□□□ 0.71
NEDD8-201ENST00000250495 PCDHGA11Q9Y5H2 935 aa19.5■□□□□ 0.71
NEDD8-201ENST00000250495 PDZD2O15018 2839 aa19.49■□□□□ 0.71
NEDD8-201ENST00000250495 A0A087X1B8 175 aa19.49■□□□□ 0.71
NEDD8-201ENST00000250495 NPIPA2E9PIF3 369 aa19.49■□□□□ 0.71
NEDD8-201ENST00000250495 NPIPA3F8WFD2 350 aa19.49■□□□□ 0.71
NEDD8-201ENST00000250495 GLSO94925 669 aaPredicted RBP19.49■□□□□ 0.71
NEDD8-201ENST00000250495 P04436 131 aa19.49■□□□□ 0.71
NEDD8-201ENST00000250495 CHRNB4P30926 498 aa19.49■□□□□ 0.71
NEDD8-201ENST00000250495 ARFIP1P53367 373 aa19.49■□□□□ 0.71
NEDD8-201ENST00000250495 DDX39BQ13838 428 aaKnown RBP19.49■□□□□ 0.71
NEDD8-201ENST00000250495 FAM83EQ2M2I3 478 aa19.49■□□□□ 0.71
NEDD8-201ENST00000250495 GXYLT1Q4G148 440 aa19.49■□□□□ 0.71
NEDD8-201ENST00000250495 PIGGQ5H8A4 983 aa19.49■□□□□ 0.71
NEDD8-201ENST00000250495 EMC4Q5J8M3 183 aa19.49■□□□□ 0.71
NEDD8-201ENST00000250495 LIPJQ5W064 366 aa19.49■□□□□ 0.71
NEDD8-201ENST00000250495 FAM47EQ6ZV65 393 aa19.49■□□□□ 0.71
NEDD8-201ENST00000250495 ACAD11Q709F0 780 aa19.49■□□□□ 0.71
NEDD8-201ENST00000250495 GPR180Q86V85 440 aa19.49■□□□□ 0.71
NEDD8-201ENST00000250495 OR4N5Q8IXE1 308 aa19.49■□□□□ 0.71
NEDD8-201ENST00000250495 NUBPLQ8TB37 319 aa19.49■□□□□ 0.71
NEDD8-201ENST00000250495 ART5Q96L15 291 aa19.49■□□□□ 0.71
NEDD8-201ENST00000250495 RNF6Q9Y252 685 aa19.49■□□□□ 0.71
NEDD8-201ENST00000250495 FBN2P35556 2912 aa19.48■□□□□ 0.71
NEDD8-201ENST00000250495 OR14I1A6ND48 311 aa19.48■□□□□ 0.71
NEDD8-201ENST00000250495 G3V3Y1 287 aa19.48■□□□□ 0.71
NEDD8-201ENST00000250495 BCKDKO14874 412 aa19.48■□□□□ 0.71
NEDD8-201ENST00000250495 FGF17O60258 216 aa19.48■□□□□ 0.71
NEDD8-201ENST00000250495 MTHFD2P13995 350 aa19.48■□□□□ 0.71
NEDD8-201ENST00000250495 PTX3P26022 381 aaPredicted RBP19.48■□□□□ 0.71
NEDD8-201ENST00000250495 PHEXP78562 749 aa19.48■□□□□ 0.71
NEDD8-201ENST00000250495 GUCY2DQ02846 1103 aa19.48■□□□□ 0.71
NEDD8-201ENST00000250495 ASPHQ12797 758 aa19.48■□□□□ 0.71
NEDD8-201ENST00000250495 ACAP2Q15057 778 aa19.48■□□□□ 0.71
NEDD8-201ENST00000250495 ZDHHC24Q6UX98 284 aa19.48■□□□□ 0.71
NEDD8-201ENST00000250495 MYLK4Q86YV6 388 aaPredicted RBP19.48■□□□□ 0.71
NEDD8-201ENST00000250495 ZCCHC7Q8N3Z6 543 aaKnown RBP19.48■□□□□ 0.71
NEDD8-201ENST00000250495 FAM109AQ8N4B1 249 aa19.48■□□□□ 0.71
NEDD8-201ENST00000250495 MYRIPQ8NFW9 859 aa19.48■□□□□ 0.71
NEDD8-201ENST00000250495 REPS1Q96D71 796 aa19.48■□□□□ 0.71
NEDD8-201ENST00000250495 TREX2Q9BQ50 279 aaPredicted RBP19.48■□□□□ 0.71
NEDD8-201ENST00000250495 SORBS1Q9BX66 1292 aaKnown RBP19.48■□□□□ 0.71
NEDD8-201ENST00000250495 ACTR8Q9H981 624 aa19.48■□□□□ 0.71
NEDD8-201ENST00000250495 KCNJ16Q9NPI9 418 aa19.48■□□□□ 0.71
NEDD8-201ENST00000250495 RYDENQ9NUL5 291 aaKnown RBP19.48■□□□□ 0.71
NEDD8-201ENST00000250495 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.48■□□□□ 0.71
NEDD8-201ENST00000250495 PHF3Q92576 2039 aaKnown RBP19.47■□□□□ 0.71
NEDD8-201ENST00000250495 A0A0G2JMM0 328 aa19.47■□□□□ 0.71
NEDD8-201ENST00000250495 A0A1W2PPB8 328 aa19.47■□□□□ 0.71
NEDD8-201ENST00000250495 A0A1W2PRS3 328 aa19.47■□□□□ 0.71
NEDD8-201ENST00000250495 KIR3DP1A8MWS1 328 aa19.47■□□□□ 0.71
NEDD8-201ENST00000250495 ZNF354AO60765 605 aaPredicted RBP19.47■□□□□ 0.71
NEDD8-201ENST00000250495 IGHG3P01860 377 aa19.47■□□□□ 0.71
NEDD8-201ENST00000250495 C2P06681 752 aa19.47■□□□□ 0.71
NEDD8-201ENST00000250495 GFAPP14136 432 aa19.47■□□□□ 0.71
NEDD8-201ENST00000250495 POU3F2P20265 443 aaPredicted RBP19.47■□□□□ 0.71
NEDD8-201ENST00000250495 BUD31P41223 144 aaPredicted RBP19.47■□□□□ 0.71
NEDD8-201ENST00000250495 NR0B1P51843 470 aaKnown RBP19.47■□□□□ 0.71
NEDD8-201ENST00000250495 PLIN5Q00G26 463 aa19.47■□□□□ 0.71
NEDD8-201ENST00000250495 TLE4Q04727 773 aa19.47■□□□□ 0.71
NEDD8-201ENST00000250495 PMPCAQ10713 525 aa19.47■□□□□ 0.71
NEDD8-201ENST00000250495 TBL3Q12788 808 aaKnown RBP19.47■□□□□ 0.71
NEDD8-201ENST00000250495 SETDB1Q15047 1291 aa19.47■□□□□ 0.71
NEDD8-201ENST00000250495 TRADDQ15628 312 aa19.47■□□□□ 0.71
NEDD8-201ENST00000250495 PFKFB4Q16877 469 aa19.47■□□□□ 0.71
NEDD8-201ENST00000250495 HYAL4Q2M3T9 481 aa19.47■□□□□ 0.71
NEDD8-201ENST00000250495 CENPLQ8N0S6 344 aaPredicted RBP19.47■□□□□ 0.71
NEDD8-201ENST00000250495 SLC15A4Q8N697 577 aa19.47■□□□□ 0.71
NEDD8-201ENST00000250495 TMEM251Q8N6I4 163 aa19.47■□□□□ 0.71
NEDD8-201ENST00000250495 OR5M3Q8NGP4 307 aa19.47■□□□□ 0.71
NEDD8-201ENST00000250495 SLC22A8Q8TCC7 542 aa19.47■□□□□ 0.71
NEDD8-201ENST00000250495 KCTD4Q8WVF5 259 aa19.47■□□□□ 0.71
NEDD8-201ENST00000250495 PPWD1Q96BP3 646 aaKnown RBP19.47■□□□□ 0.71
NEDD8-201ENST00000250495 SMC6Q96SB8 1091 aa19.47■□□□□ 0.71
NEDD8-201ENST00000250495 MTERF1Q99551 399 aaKnown RBP19.47■□□□□ 0.71
NEDD8-201ENST00000250495 PELOQ9BRX2 385 aaKnown RBP19.47■□□□□ 0.71
NEDD8-201ENST00000250495 MCCC2Q9HCC0 563 aa19.47■□□□□ 0.71
NEDD8-201ENST00000250495 DMRT3Q9NQL9 472 aa19.47■□□□□ 0.71
NEDD8-201ENST00000250495 A0A1B0GVC2 190 aa19.46■□□□□ 0.71
NEDD8-201ENST00000250495 FOXO6A8MYZ6 492 aa19.46■□□□□ 0.71
NEDD8-201ENST00000250495 H0YIV9 168 aa19.46■□□□□ 0.71
NEDD8-201ENST00000250495 PLPP1O14494 284 aa19.46■□□□□ 0.71
NEDD8-201ENST00000250495 UGDHO60701 494 aa19.46■□□□□ 0.71
NEDD8-201ENST00000250495 IGKV3-11P04433 115 aa19.46■□□□□ 0.71
NEDD8-201ENST00000250495 ALOX15P16050 662 aaPredicted RBP19.46■□□□□ 0.71
NEDD8-201ENST00000250495 MAGEA5P43359 124 aa19.46■□□□□ 0.71
NEDD8-201ENST00000250495 DNASE1L1P49184 302 aa19.46■□□□□ 0.71
NEDD8-201ENST00000250495 ALDH18A1P54886 795 aaKnown RBP19.46■□□□□ 0.71
NEDD8-201ENST00000250495 TNFRSF17Q02223 184 aa19.46■□□□□ 0.71
NEDD8-201ENST00000250495 FOLH1Q04609 750 aa19.46■□□□□ 0.71
NEDD8-201ENST00000250495 SLC10A1Q14973 349 aa19.46■□□□□ 0.71
NEDD8-201ENST00000250495 MROH9Q5TGP6 573 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms