RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 CLIC1O00299 241 aa16.09■□□□□ 0.17
CDKN1A-201ENST00000244741 CAPN5O15484 640 aaPredicted RBP16.09■□□□□ 0.17
CDKN1A-201ENST00000244741 C1GALT1C1LP0DN25 315 aa16.09■□□□□ 0.17
CDKN1A-201ENST00000244741 CD59P13987 128 aa16.09■□□□□ 0.17
CDKN1A-201ENST00000244741 MATN1P21941 496 aa16.09■□□□□ 0.17
CDKN1A-201ENST00000244741 CAPZBP47756 277 aa16.09■□□□□ 0.17
CDKN1A-201ENST00000244741 TRPC1P48995 793 aa16.09■□□□□ 0.17
CDKN1A-201ENST00000244741 HNRNPFP52597 415 aaKnown RBP16.09■□□□□ 0.17
CDKN1A-201ENST00000244741 CFHR1Q03591 330 aa16.09■□□□□ 0.17
CDKN1A-201ENST00000244741 CSTF3Q12996 717 aaKnown RBP16.09■□□□□ 0.17
CDKN1A-201ENST00000244741 KIR2DS3Q14952 304 aa16.09■□□□□ 0.17
CDKN1A-201ENST00000244741 C6orf141Q5SZD1 244 aa16.09■□□□□ 0.17
CDKN1A-201ENST00000244741 BROXQ5VW32 411 aa16.09■□□□□ 0.17
CDKN1A-201ENST00000244741 HDAC2Q92769 488 aaKnown RBP16.09■□□□□ 0.17
CDKN1A-201ENST00000244741 MAGEB10Q96LZ2 347 aaPredicted RBP16.09■□□□□ 0.17
CDKN1A-201ENST00000244741 PANX1Q96RD7 426 aa16.09■□□□□ 0.17
CDKN1A-201ENST00000244741 TUBA1CQ9BQE3 449 aa16.09■□□□□ 0.17
CDKN1A-201ENST00000244741 PCBD2Q9H0N5 130 aa16.09■□□□□ 0.17
CDKN1A-201ENST00000244741 ABCG4Q9H172 646 aa16.09■□□□□ 0.17
CDKN1A-201ENST00000244741 EVPLLA8MZ36 301 aa16.09■□□□□ 0.17
CDKN1A-201ENST00000244741 UGDHO60701 494 aa16.09■□□□□ 0.17
CDKN1A-201ENST00000244741 ZNF682O95780 498 aa16.09■□□□□ 0.17
CDKN1A-201ENST00000244741 PCSK2P16519 638 aa16.09■□□□□ 0.17
CDKN1A-201ENST00000244741 JUNBP17275 347 aaPredicted RBP16.09■□□□□ 0.17
CDKN1A-201ENST00000244741 GRK6P43250 576 aa16.09■□□□□ 0.17
CDKN1A-201ENST00000244741 TPD52P55327 224 aaPredicted RBP16.09■□□□□ 0.17
CDKN1A-201ENST00000244741 SRSF11Q05519 484 aaKnown RBP16.09■□□□□ 0.17
CDKN1A-201ENST00000244741 CD47Q08722 323 aa16.09■□□□□ 0.17
CDKN1A-201ENST00000244741 EPS8Q12929 822 aa16.09■□□□□ 0.17
CDKN1A-201ENST00000244741 PROX2Q3B8N5 592 aa16.09■□□□□ 0.17
CDKN1A-201ENST00000244741 XAF1Q6GPH4 301 aa16.09■□□□□ 0.17
CDKN1A-201ENST00000244741 LAIR2Q6ISS4 152 aa16.09■□□□□ 0.17
CDKN1A-201ENST00000244741 ANKRD26P1Q6NSI1 321 aa16.09■□□□□ 0.17
CDKN1A-201ENST00000244741 ZNF621Q6ZSS3 439 aa16.09■□□□□ 0.17
CDKN1A-201ENST00000244741 SERPINA11Q86U17 422 aa16.09■□□□□ 0.17
CDKN1A-201ENST00000244741 ZDHHC21Q8IVQ6 265 aa16.09■□□□□ 0.17
CDKN1A-201ENST00000244741 FAM181AQ8N9Y4 354 aa16.09■□□□□ 0.17
CDKN1A-201ENST00000244741 OR13F1Q8NGS4 319 aa16.09■□□□□ 0.17
CDKN1A-201ENST00000244741 CDC26Q8NHZ8 85 aa16.09■□□□□ 0.17
CDKN1A-201ENST00000244741 CNDP2Q96KP4 475 aaKnown RBP16.09■□□□□ 0.17
CDKN1A-201ENST00000244741 CCDC3Q9BQI4 270 aa16.09■□□□□ 0.17
CDKN1A-201ENST00000244741 FAM186AA6NE01 2351 aa16.08■□□□□ 0.17
CDKN1A-201ENST00000244741 LOC100130705A0A1B0GUX0 176 aa16.08■□□□□ 0.16
CDKN1A-201ENST00000244741 ABCB7O75027 752 aa16.08■□□□□ 0.16
CDKN1A-201ENST00000244741 CCNDBP1O95273 360 aa16.08■□□□□ 0.16
CDKN1A-201ENST00000244741 KCNK5O95279 499 aa16.08■□□□□ 0.16
CDKN1A-201ENST00000244741 CPSF4O95639 269 aaKnown RBP16.08■□□□□ 0.16
CDKN1A-201ENST00000244741 COX7A2P14406 83 aa16.08■□□□□ 0.16
CDKN1A-201ENST00000244741 CMPK1P30085 196 aa16.08■□□□□ 0.16
CDKN1A-201ENST00000244741 MAGEA2P43356 314 aa16.08■□□□□ 0.16
CDKN1A-201ENST00000244741 CYP4F2P78329 520 aa16.08■□□□□ 0.16
CDKN1A-201ENST00000244741 LRRC23Q53EV4 343 aaPredicted RBP16.08■□□□□ 0.16
CDKN1A-201ENST00000244741 GALNT10Q86SR1 603 aa16.08■□□□□ 0.16
CDKN1A-201ENST00000244741 CLECL1Q8IZS7 167 aa16.08■□□□□ 0.16
CDKN1A-201ENST00000244741 IFI44Q8TCB0 444 aa16.08■□□□□ 0.16
CDKN1A-201ENST00000244741 BARD1Q99728 777 aaKnown RBP16.08■□□□□ 0.16
CDKN1A-201ENST00000244741 MAP3K3Q99759 626 aa16.08■□□□□ 0.16
CDKN1A-201ENST00000244741 MACROD1Q9BQ69 325 aa16.08■□□□□ 0.16
CDKN1A-201ENST00000244741 NUDT22Q9BRQ3 303 aa16.08■□□□□ 0.16
CDKN1A-201ENST00000244741 IRF2BPLQ9H1B7 796 aa16.08■□□□□ 0.16
CDKN1A-201ENST00000244741 SYNPO2LQ9H987 977 aa16.08■□□□□ 0.16
CDKN1A-201ENST00000244741 UCK1Q9HA47 277 aa16.08■□□□□ 0.16
CDKN1A-201ENST00000244741 A0A1W2PPW3 197 aa16.07■□□□□ 0.16
CDKN1A-201ENST00000244741 A8MU76 341 aa16.07■□□□□ 0.16
CDKN1A-201ENST00000244741 HAT1O14929 419 aa16.07■□□□□ 0.16
CDKN1A-201ENST00000244741 LCMT2O60294 686 aaKnown RBP16.07■□□□□ 0.16
CDKN1A-201ENST00000244741 ETHE1O95571 254 aa16.07■□□□□ 0.16
CDKN1A-201ENST00000244741 ZNF883P0CG24 379 aa16.07■□□□□ 0.16
CDKN1A-201ENST00000244741 LAMP1P11279 417 aa16.07■□□□□ 0.16
CDKN1A-201ENST00000244741 EFNA1P20827 205 aaPredicted RBP16.07■□□□□ 0.16
CDKN1A-201ENST00000244741 CD1CP29017 333 aa16.07■□□□□ 0.16
CDKN1A-201ENST00000244741 CSF2RBP32927 897 aa16.07■□□□□ 0.16
CDKN1A-201ENST00000244741 CCR8P51685 355 aa16.07■□□□□ 0.16
CDKN1A-201ENST00000244741 CSNK1G2P78368 415 aa16.07■□□□□ 0.16
CDKN1A-201ENST00000244741 FGD3Q5JSP0 725 aa16.07■□□□□ 0.16
CDKN1A-201ENST00000244741 ASCL5Q7RTU5 278 aa16.07■□□□□ 0.16
CDKN1A-201ENST00000244741 TMPRSS9Q7Z410 1059 aa16.07■□□□□ 0.16
CDKN1A-201ENST00000244741 FAM129CQ86XR2 697 aa16.07■□□□□ 0.16
CDKN1A-201ENST00000244741 HIPK1Q86Z02 1210 aa16.07■□□□□ 0.16
CDKN1A-201ENST00000244741 ZZZ3Q8IYH5 903 aa16.07■□□□□ 0.16
CDKN1A-201ENST00000244741 SLC22A18Q96BI1 424 aa16.07■□□□□ 0.16
CDKN1A-201ENST00000244741 EXD2Q9NVH0 621 aa16.07■□□□□ 0.16
CDKN1A-201ENST00000244741 ABCG2Q9UNQ0 655 aa16.07■□□□□ 0.16
CDKN1A-201ENST00000244741 NUP214P35658 2090 aaPredicted RBP16.07■□□□□ 0.16
CDKN1A-201ENST00000244741 FAM221BA6H8Z2 402 aa16.07■□□□□ 0.16
CDKN1A-201ENST00000244741 FOXD2O60548 495 aaPredicted RBP16.07■□□□□ 0.16
CDKN1A-201ENST00000244741 PRMT3O60678 531 aa16.07■□□□□ 0.16
CDKN1A-201ENST00000244741 MITFO75030 526 aaPredicted RBP16.07■□□□□ 0.16
CDKN1A-201ENST00000244741 LDOC1O95751 146 aaPredicted RBP16.07■□□□□ 0.16
CDKN1A-201ENST00000244741 HTR1AP08908 422 aa16.07■□□□□ 0.16
CDKN1A-201ENST00000244741 CKMT1AP12532 417 aa16.07■□□□□ 0.16
CDKN1A-201ENST00000244741 ST6GAL1P15907 406 aa16.07■□□□□ 0.16
CDKN1A-201ENST00000244741 AGXTP21549 392 aa16.07■□□□□ 0.16
CDKN1A-201ENST00000244741 CDH3P22223 829 aa16.07■□□□□ 0.16
CDKN1A-201ENST00000244741 MAPK10P53779 464 aa16.07■□□□□ 0.16
CDKN1A-201ENST00000244741 ISL1P61371 349 aa16.07■□□□□ 0.16
CDKN1A-201ENST00000244741 CCL7P80098 99 aa16.07■□□□□ 0.16
CDKN1A-201ENST00000244741 PIGFQ07326 219 aa16.07■□□□□ 0.16
CDKN1A-201ENST00000244741 C16orf72Q14CZ0 275 aa16.07■□□□□ 0.16
CDKN1A-201ENST00000244741 LAPTM4AQ15012 233 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms