RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 E2F2Q14209 437 aa19.58■□□□□ 0.73
SNX3-201ENST00000230085 CHRNA6Q15825 494 aa19.58■□□□□ 0.73
SNX3-201ENST00000230085 PRAMEF9Q5VWM5 478 aa19.58■□□□□ 0.73
SNX3-201ENST00000230085 ZNF517Q6ZMY9 492 aaPredicted RBP19.58■□□□□ 0.73
SNX3-201ENST00000230085 MBOAT1Q6ZNC8 495 aa19.58■□□□□ 0.73
SNX3-201ENST00000230085 UBE2R2Q712K3 238 aaPredicted RBP19.58■□□□□ 0.73
SNX3-201ENST00000230085 B3GNT7Q8NFL0 401 aa19.58■□□□□ 0.73
SNX3-201ENST00000230085 MCCC1Q96RQ3 725 aaPredicted RBP19.58■□□□□ 0.73
SNX3-201ENST00000230085 CCM2Q9BSQ5 444 aa19.58■□□□□ 0.73
SNX3-201ENST00000230085 SLC25A19Q9HC21 320 aa19.58■□□□□ 0.73
SNX3-201ENST00000230085 TMEM184CQ9NVA4 438 aa19.58■□□□□ 0.73
SNX3-201ENST00000230085 FTSJ1Q9UET6 329 aa19.58■□□□□ 0.73
SNX3-201ENST00000230085 LSM2Q9Y333 95 aaKnown RBP19.58■□□□□ 0.73
SNX3-201ENST00000230085 EDDM13A0A1B0GTR0 161 aa19.57■□□□□ 0.72
SNX3-201ENST00000230085 CENPXA8MT69 81 aa19.57■□□□□ 0.72
SNX3-201ENST00000230085 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.57■□□□□ 0.72
SNX3-201ENST00000230085 H0YIV9 168 aa19.57■□□□□ 0.72
SNX3-201ENST00000230085 TNFRSF21O75509 655 aa19.57■□□□□ 0.72
SNX3-201ENST00000230085 ALX3O95076 343 aa19.57■□□□□ 0.72
SNX3-201ENST00000230085 LRATO95237 230 aa19.57■□□□□ 0.72
SNX3-201ENST00000230085 ALPIP09923 528 aa19.57■□□□□ 0.72
SNX3-201ENST00000230085 CXCL12P48061 93 aa19.57■□□□□ 0.72
SNX3-201ENST00000230085 RFX2P48378 723 aa19.57■□□□□ 0.72
SNX3-201ENST00000230085 MVDP53602 400 aa19.57■□□□□ 0.72
SNX3-201ENST00000230085 SNRPGP62308 76 aaKnown RBP19.57■□□□□ 0.72
SNX3-201ENST00000230085 PTCHD3Q3KNS1 767 aa19.57■□□□□ 0.72
SNX3-201ENST00000230085 ZFP69Q49AA0 526 aa19.57■□□□□ 0.72
SNX3-201ENST00000230085 TMEM31Q5JXX7 168 aa19.57■□□□□ 0.72
SNX3-201ENST00000230085 PLEKHS1Q5SXH7 462 aa19.57■□□□□ 0.72
SNX3-201ENST00000230085 VASH1Q7L8A9 365 aaPredicted RBP19.57■□□□□ 0.72
SNX3-201ENST00000230085 METTL3Q86U44 580 aaKnown RBP19.57■□□□□ 0.72
SNX3-201ENST00000230085 TRIM69Q86WT6 500 aa19.57■□□□□ 0.72
SNX3-201ENST00000230085 LGI4Q8N135 537 aa19.57■□□□□ 0.72
SNX3-201ENST00000230085 Q8N9G6 341 aaPredicted RBP19.57■□□□□ 0.72
SNX3-201ENST00000230085 GRPEL2Q8TAA5 225 aa19.57■□□□□ 0.72
SNX3-201ENST00000230085 TPD52L3Q96J77 140 aa19.57■□□□□ 0.72
SNX3-201ENST00000230085 DPH2Q9BQC3 489 aaPredicted RBP19.57■□□□□ 0.72
SNX3-201ENST00000230085 NDEL1Q9GZM8 345 aa19.57■□□□□ 0.72
SNX3-201ENST00000230085 IMPAD1Q9NX62 359 aa19.57■□□□□ 0.72
SNX3-201ENST00000230085 SEC14L4Q9UDX3 406 aa19.57■□□□□ 0.72
SNX3-201ENST00000230085 CAB39Q9Y376 341 aaPredicted RBP19.57■□□□□ 0.72
SNX3-201ENST00000230085 PPIL1Q9Y3C6 166 aa19.57■□□□□ 0.72
SNX3-201ENST00000230085 HCN4Q9Y3Q4 1203 aa19.57■□□□□ 0.72
SNX3-201ENST00000230085 HIST1H2AGP0C0S8 130 aaPredicted RBP19.57■□□□□ 0.72
SNX3-201ENST00000230085 HIST1H2ADP20671 130 aa19.57■□□□□ 0.72
SNX3-201ENST00000230085 SSX1Q16384 188 aa19.57■□□□□ 0.72
SNX3-201ENST00000230085 BCL7AQ4VC05 210 aa19.57■□□□□ 0.72
SNX3-201ENST00000230085 CRB2Q5IJ48 1285 aa19.57■□□□□ 0.72
SNX3-201ENST00000230085 ZDHHC20Q5W0Z9 365 aa19.57■□□□□ 0.72
SNX3-201ENST00000230085 GALNT10Q86SR1 603 aa19.57■□□□□ 0.72
SNX3-201ENST00000230085 SLC30A8Q8IWU4 369 aa19.57■□□□□ 0.72
SNX3-201ENST00000230085 OR2A12Q8NGT7 310 aa19.57■□□□□ 0.72
SNX3-201ENST00000230085 KIAA1143Q96AT1 154 aaPredicted RBP19.57■□□□□ 0.72
SNX3-201ENST00000230085 RNF170Q96K19 258 aa19.57■□□□□ 0.72
SNX3-201ENST00000230085 HIST1H2AHQ96KK5 128 aa19.57■□□□□ 0.72
SNX3-201ENST00000230085 HIST1H2AJQ99878 128 aa19.57■□□□□ 0.72
SNX3-201ENST00000230085 IER2Q9BTL4 223 aa19.57■□□□□ 0.72
SNX3-201ENST00000230085 H2AFJQ9BTM1 129 aa19.57■□□□□ 0.72
SNX3-201ENST00000230085 MKRN2Q9H000 416 aaKnown RBP19.57■□□□□ 0.72
SNX3-201ENST00000230085 ATP6V1HQ9UI12 483 aa19.57■□□□□ 0.72
SNX3-201ENST00000230085 TSR3Q9UJK0 312 aaKnown RBP19.57■□□□□ 0.72
SNX3-201ENST00000230085 VPS4AQ9UN37 437 aa19.57■□□□□ 0.72
SNX3-201ENST00000230085 KPNA5O15131 536 aa19.56■□□□□ 0.72
SNX3-201ENST00000230085 YY2O15391 372 aa19.56■□□□□ 0.72
SNX3-201ENST00000230085 C1QCP02747 245 aa19.56■□□□□ 0.72
SNX3-201ENST00000230085 LAMP1P11279 417 aa19.56■□□□□ 0.72
SNX3-201ENST00000230085 XCR1P46094 333 aa19.56■□□□□ 0.72
SNX3-201ENST00000230085 BNC1Q01954 994 aa19.56■□□□□ 0.72
SNX3-201ENST00000230085 CARTPTQ16568 116 aa19.56■□□□□ 0.72
SNX3-201ENST00000230085 ATXN7L2Q5T6C5 722 aaPredicted RBP19.56■□□□□ 0.72
SNX3-201ENST00000230085 MAMSTRQ6ZN01 415 aa19.56■□□□□ 0.72
SNX3-201ENST00000230085 Q6ZPB1 254 aaPredicted RBP19.56■□□□□ 0.72
SNX3-201ENST00000230085 DPY19L3Q6ZPD9 716 aa19.56■□□□□ 0.72
SNX3-201ENST00000230085 NRARPQ7Z6K4 114 aa19.56■□□□□ 0.72
SNX3-201ENST00000230085 C1orf210Q8IVY1 113 aa19.56■□□□□ 0.72
SNX3-201ENST00000230085 CLECL1Q8IZS7 167 aa19.56■□□□□ 0.72
SNX3-201ENST00000230085 DTWD2Q8NBA8 298 aa19.56■□□□□ 0.72
SNX3-201ENST00000230085 OR6K2Q8NGY2 324 aa19.56■□□□□ 0.72
SNX3-201ENST00000230085 GEMIN6Q8WXD5 167 aaKnown RBP19.56■□□□□ 0.72
SNX3-201ENST00000230085 CEP19Q96LK0 163 aa19.56■□□□□ 0.72
SNX3-201ENST00000230085 BHLHE41Q9C0J9 482 aaPredicted RBP19.56■□□□□ 0.72
SNX3-201ENST00000230085 SRRQ9GZT4 340 aa19.56■□□□□ 0.72
SNX3-201ENST00000230085 SLC6A17Q9H1V8 727 aa19.56■□□□□ 0.72
SNX3-201ENST00000230085 ZNF556Q9HAH1 456 aa19.56■□□□□ 0.72
SNX3-201ENST00000230085 MS4A12Q9NXJ0 267 aa19.56■□□□□ 0.72
SNX3-201ENST00000230085 TCRBV21S2A2A0A5A6 115 aa19.55■□□□□ 0.72
SNX3-201ENST00000230085 FAM25AB3EWG3 89 aa19.55■□□□□ 0.72
SNX3-201ENST00000230085 FAM25CB3EWG5 89 aa19.55■□□□□ 0.72
SNX3-201ENST00000230085 FAM25GB3EWG6 89 aa19.55■□□□□ 0.72
SNX3-201ENST00000230085 TRIM3O75382 744 aaPredicted RBP19.55■□□□□ 0.72
SNX3-201ENST00000230085 GPX5O75715 221 aa19.55■□□□□ 0.72
SNX3-201ENST00000230085 CYP2A7P20853 494 aa19.55■□□□□ 0.72
SNX3-201ENST00000230085 CCR7P32248 378 aa19.55■□□□□ 0.72
SNX3-201ENST00000230085 DGKEP52429 567 aa19.55■□□□□ 0.72
SNX3-201ENST00000230085 EEF1A2Q05639 463 aaKnown RBP19.55■□□□□ 0.72
SNX3-201ENST00000230085 SOWAHCQ53LP3 525 aaPredicted RBP19.55■□□□□ 0.72
SNX3-201ENST00000230085 CPTPQ5TA50 214 aa19.55■□□□□ 0.72
SNX3-201ENST00000230085 OR7G1Q8NGA0 311 aa19.55■□□□□ 0.72
SNX3-201ENST00000230085 TRIM63Q969Q1 353 aa19.55■□□□□ 0.72
SNX3-201ENST00000230085 OPALINQ96PE5 141 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms