RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 CSO75390 466 aaKnown RBP12.65□□□□□ -0.38
SRP54-201ENST00000216774 UGT2B17O75795 530 aa12.65□□□□□ -0.38
SRP54-201ENST00000216774 FGF19O95750 216 aa12.65□□□□□ -0.38
SRP54-201ENST00000216774 H1F0P07305 194 aaKnown RBP12.65□□□□□ -0.38
SRP54-201ENST00000216774 ADH1AP07327 375 aa12.65□□□□□ -0.38
SRP54-201ENST00000216774 ITGB7P26010 798 aa12.65□□□□□ -0.38
SRP54-201ENST00000216774 ACADLP28330 430 aa12.65□□□□□ -0.38
SRP54-201ENST00000216774 RPS19P39019 145 aaKnown RBP12.65□□□□□ -0.38
SRP54-201ENST00000216774 RORCP51449 518 aa12.65□□□□□ -0.38
SRP54-201ENST00000216774 XKP51811 444 aa12.65□□□□□ -0.38
SRP54-201ENST00000216774 SEC23BQ15437 767 aa12.65□□□□□ -0.38
SRP54-201ENST00000216774 OCLNQ16625 522 aa12.65□□□□□ -0.38
SRP54-201ENST00000216774 POM121L1PQ3SYA9 428 aa12.65□□□□□ -0.38
SRP54-201ENST00000216774 ZNF544Q6NX49 715 aa12.65□□□□□ -0.38
SRP54-201ENST00000216774 PRR23CQ6ZRP0 262 aa12.65□□□□□ -0.38
SRP54-201ENST00000216774 ZNF765Q7L2R6 523 aa12.65□□□□□ -0.38
SRP54-201ENST00000216774 TRMT11Q7Z4G4 463 aaKnown RBP12.65□□□□□ -0.38
SRP54-201ENST00000216774 FAM129CQ86XR2 697 aa12.65□□□□□ -0.38
SRP54-201ENST00000216774 PROKR2Q8NFJ6 384 aa12.65□□□□□ -0.38
SRP54-201ENST00000216774 VN1R2Q8NFZ6 395 aa12.65□□□□□ -0.38
SRP54-201ENST00000216774 ZNF486Q96H40 463 aaPredicted RBP12.65□□□□□ -0.38
SRP54-201ENST00000216774 TMEM19Q96HH6 336 aa12.65□□□□□ -0.38
SRP54-201ENST00000216774 ZNF354BQ96LW1 612 aa12.65□□□□□ -0.38
SRP54-201ENST00000216774 WDFY2Q96P53 400 aa12.65□□□□□ -0.38
SRP54-201ENST00000216774 OR2A14Q96R47 310 aa12.65□□□□□ -0.38
SRP54-201ENST00000216774 SAGE1Q9NXZ1 904 aa12.65□□□□□ -0.38
SRP54-201ENST00000216774 ACAD8Q9UKU7 415 aa12.65□□□□□ -0.38
SRP54-201ENST00000216774 ITM2BQ9Y287 266 aa12.65□□□□□ -0.38
SRP54-201ENST00000216774 GRIP1Q9Y3R0 1128 aa12.65□□□□□ -0.38
SRP54-201ENST00000216774 KIF26AQ9ULI4 1882 aaPredicted RBP12.64□□□□□ -0.39
SRP54-201ENST00000216774 HYKKA2RU49 373 aa12.64□□□□□ -0.39
SRP54-201ENST00000216774 SLC35F4A4IF30 521 aa12.64□□□□□ -0.39
SRP54-201ENST00000216774 H3BQ06 376 aaPredicted RBP12.64□□□□□ -0.39
SRP54-201ENST00000216774 PDPK1O15530 556 aa12.64□□□□□ -0.39
SRP54-201ENST00000216774 OR10H3O60404 316 aa12.64□□□□□ -0.39
SRP54-201ENST00000216774 CCNKO75909 580 aa12.64□□□□□ -0.39
SRP54-201ENST00000216774 S100A1P23297 94 aa12.64□□□□□ -0.39
SRP54-201ENST00000216774 SOX3P41225 446 aa12.64□□□□□ -0.39
SRP54-201ENST00000216774 CRYBB2P43320 205 aa12.64□□□□□ -0.39
SRP54-201ENST00000216774 MAPK12P53778 367 aa12.64□□□□□ -0.39
SRP54-201ENST00000216774 MANFP55145 182 aaKnown RBP12.64□□□□□ -0.39
SRP54-201ENST00000216774 LRRC26Q2I0M4 334 aa12.64□□□□□ -0.39
SRP54-201ENST00000216774 MFSD4BQ5TF39 518 aa12.64□□□□□ -0.39
SRP54-201ENST00000216774 TNFAIP8L2Q6P589 184 aaPredicted RBP12.64□□□□□ -0.39
SRP54-201ENST00000216774 SLC34A3Q8N130 599 aa12.64□□□□□ -0.39
SRP54-201ENST00000216774 CELF2-AS1Q8N7Q2 184 aa12.64□□□□□ -0.39
SRP54-201ENST00000216774 NANOGP1Q8N7R0 232 aa12.64□□□□□ -0.39
SRP54-201ENST00000216774 LMNTD1Q8N9Z9 388 aa12.64□□□□□ -0.39
SRP54-201ENST00000216774 ZNF607Q96SK3 696 aa12.64□□□□□ -0.39
SRP54-201ENST00000216774 SORBS1Q9BX66 1292 aaKnown RBP12.64□□□□□ -0.39
SRP54-201ENST00000216774 POLR2J3Q9H1A7 115 aaKnown RBP12.64□□□□□ -0.39
SRP54-201ENST00000216774 RHBGQ9H310 441 aa12.64□□□□□ -0.39
SRP54-201ENST00000216774 MTG2Q9H4K7 406 aa12.64□□□□□ -0.39
SRP54-201ENST00000216774 EXOSC4Q9NPD3 245 aaKnown RBP12.64□□□□□ -0.39
SRP54-201ENST00000216774 C14orf119Q9NWQ9 140 aa12.64□□□□□ -0.39
SRP54-201ENST00000216774 HCFC1R1Q9NWW0 138 aa12.64□□□□□ -0.39
SRP54-201ENST00000216774 ERVK13-1Q9NX77 482 aa12.64□□□□□ -0.39
SRP54-201ENST00000216774 DNAJC27Q9NZQ0 273 aa12.64□□□□□ -0.39
SRP54-201ENST00000216774 TBC1D24Q9ULP9 559 aa12.64□□□□□ -0.39
SRP54-201ENST00000216774 PCDHGB2Q9Y5G2 931 aa12.64□□□□□ -0.39
SRP54-201ENST00000216774 ANKDD1BA6NHY2 528 aa12.64□□□□□ -0.39
SRP54-201ENST00000216774 PLPP1O14494 284 aa12.64□□□□□ -0.39
SRP54-201ENST00000216774 RGS13O14921 159 aa12.64□□□□□ -0.39
SRP54-201ENST00000216774 SEMA7AO75326 666 aa12.64□□□□□ -0.39
SRP54-201ENST00000216774 FGF18O76093 207 aa12.64□□□□□ -0.39
SRP54-201ENST00000216774 KCNJ5P48544 419 aa12.64□□□□□ -0.39
SRP54-201ENST00000216774 EPHA5P54756 1037 aa12.64□□□□□ -0.39
SRP54-201ENST00000216774 OR2B6P58173 313 aa12.64□□□□□ -0.39
SRP54-201ENST00000216774 COPZ1P61923 177 aa12.64□□□□□ -0.39
SRP54-201ENST00000216774 WDR5P61964 334 aaKnown RBP12.64□□□□□ -0.39
SRP54-201ENST00000216774 RPS26P62854 115 aaKnown RBP12.64□□□□□ -0.39
SRP54-201ENST00000216774 DEFB103AP81534 67 aa12.64□□□□□ -0.39
SRP54-201ENST00000216774 ALDH6A1Q02252 535 aaKnown RBP12.64□□□□□ -0.39
SRP54-201ENST00000216774 ZNF91Q05481 1191 aa12.64□□□□□ -0.39
SRP54-201ENST00000216774 CNTN1Q12860 1018 aa12.64□□□□□ -0.39
SRP54-201ENST00000216774 MLLT11Q13015 90 aaPredicted RBP12.64□□□□□ -0.39
SRP54-201ENST00000216774 C1DQ13901 141 aaKnown RBP12.64□□□□□ -0.39
SRP54-201ENST00000216774 HEPACAMQ14CZ8 416 aa12.64□□□□□ -0.39
SRP54-201ENST00000216774 ARHGAP15Q53QZ3 475 aa12.64□□□□□ -0.39
SRP54-201ENST00000216774 SLC25A30Q5SVS4 291 aa12.64□□□□□ -0.39
SRP54-201ENST00000216774 KHDRBS2Q5VWX1 349 aaKnown RBP12.64□□□□□ -0.39
SRP54-201ENST00000216774 PGBD2Q6P3X8 592 aa12.64□□□□□ -0.39
SRP54-201ENST00000216774 OR8H2Q8N162 312 aa12.64□□□□□ -0.39
SRP54-201ENST00000216774 OR9Q1Q8NGQ5 310 aa12.64□□□□□ -0.39
SRP54-201ENST00000216774 OR2L2Q8NH16 312 aa12.64□□□□□ -0.39
SRP54-201ENST00000216774 TCEAL4Q96EI5 215 aa12.64□□□□□ -0.39
SRP54-201ENST00000216774 ZNF764Q96H86 408 aaPredicted RBP12.64□□□□□ -0.39
SRP54-201ENST00000216774 FUZQ9BT04 418 aa12.64□□□□□ -0.39
SRP54-201ENST00000216774 ZNF717Q9BY31 904 aaPredicted RBP12.64□□□□□ -0.39
SRP54-201ENST00000216774 BARHL1Q9BZE3 327 aa12.64□□□□□ -0.39
SRP54-201ENST00000216774 SLAMF7Q9NQ25 335 aa12.64□□□□□ -0.39
SRP54-201ENST00000216774 CLEC2DQ9UHP7 191 aa12.64□□□□□ -0.39
SRP54-201ENST00000216774 GPR34Q9UPC5 381 aa12.64□□□□□ -0.39
SRP54-201ENST00000216774 RBMX2Q9Y388 322 aaKnown RBP12.64□□□□□ -0.39
SRP54-201ENST00000216774 V9GYH0 126 aa12.64□□□□□ -0.39
SRP54-201ENST00000216774 IQCMA0A1B0GVH7 501 aa12.63□□□□□ -0.39
SRP54-201ENST00000216774 H3BN98 237 aa12.63□□□□□ -0.39
SRP54-201ENST00000216774 CAPN5O15484 640 aaPredicted RBP12.63□□□□□ -0.39
SRP54-201ENST00000216774 SOX14O95416 240 aa12.63□□□□□ -0.39
SRP54-201ENST00000216774 KRT8P05787 483 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms