RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 ALOX12P18054 663 aa18.61■□□□□ 0.57
TNFRSF1A-201ENST00000162749 ALDH4A1P30038 563 aa18.61■□□□□ 0.57
TNFRSF1A-201ENST00000162749 SOAT1P35610 550 aa18.61■□□□□ 0.57
TNFRSF1A-201ENST00000162749 CCT8P50990 548 aa18.61■□□□□ 0.57
TNFRSF1A-201ENST00000162749 EPHA4P54764 986 aa18.61■□□□□ 0.57
TNFRSF1A-201ENST00000162749 CASP9P55211 416 aa18.61■□□□□ 0.57
TNFRSF1A-201ENST00000162749 HSPB3Q12988 150 aa18.61■□□□□ 0.57
TNFRSF1A-201ENST00000162749 COX20Q5RI15 118 aa18.61■□□□□ 0.57
TNFRSF1A-201ENST00000162749 MANEAQ5SRI9 462 aa18.61■□□□□ 0.57
TNFRSF1A-201ENST00000162749 INTS11Q5TA45 600 aaKnown RBP18.61■□□□□ 0.57
TNFRSF1A-201ENST00000162749 CBR4Q8N4T8 237 aa18.61■□□□□ 0.57
TNFRSF1A-201ENST00000162749 METTL25Q8N6Q8 603 aa18.61■□□□□ 0.57
TNFRSF1A-201ENST00000162749 FAM86B1Q8N7N1 296 aa18.61■□□□□ 0.57
TNFRSF1A-201ENST00000162749 PAPD5Q8NDF8 572 aaKnown RBP18.61■□□□□ 0.57
TNFRSF1A-201ENST00000162749 SERINC2Q96SA4 455 aa18.61■□□□□ 0.57
TNFRSF1A-201ENST00000162749 RAPGEFL1Q9UHV5 662 aa18.61■□□□□ 0.57
TNFRSF1A-201ENST00000162749 CES1P1Q9UKY3 287 aa18.61■□□□□ 0.57
TNFRSF1A-201ENST00000162749 SNX8Q9Y5X2 465 aa18.61■□□□□ 0.57
TNFRSF1A-201ENST00000162749 CLPTM1O96005 669 aa18.6■□□□□ 0.57
TNFRSF1A-201ENST00000162749 CTSBP07858 339 aa18.6■□□□□ 0.57
TNFRSF1A-201ENST00000162749 PPM1FP49593 454 aaPredicted RBP18.6■□□□□ 0.57
TNFRSF1A-201ENST00000162749 APOFQ13790 326 aa18.6■□□□□ 0.57
TNFRSF1A-201ENST00000162749 MLC1Q15049 377 aa18.6■□□□□ 0.57
TNFRSF1A-201ENST00000162749 NKAIN2Q5VXU1 208 aa18.6■□□□□ 0.57
TNFRSF1A-201ENST00000162749 SLC48A1Q6P1K1 146 aa18.6■□□□□ 0.57
TNFRSF1A-201ENST00000162749 ERICH5Q6P6B1 374 aa18.6■□□□□ 0.57
TNFRSF1A-201ENST00000162749 PRSS41Q7RTY9 318 aa18.6■□□□□ 0.57
TNFRSF1A-201ENST00000162749 OR52N2Q8NGI0 321 aa18.6■□□□□ 0.57
TNFRSF1A-201ENST00000162749 PIGKQ92643 395 aa18.6■□□□□ 0.57
TNFRSF1A-201ENST00000162749 CNRIP1Q96F85 164 aaPredicted RBP18.6■□□□□ 0.57
TNFRSF1A-201ENST00000162749 CENPNQ96H22 339 aaPredicted RBP18.6■□□□□ 0.57
TNFRSF1A-201ENST00000162749 CCDC3Q9BQI4 270 aa18.6■□□□□ 0.57
TNFRSF1A-201ENST00000162749 SPATA9Q9BWV2 254 aa18.6■□□□□ 0.57
TNFRSF1A-201ENST00000162749 SIRT3Q9NTG7 399 aaPredicted RBP18.6■□□□□ 0.57
TNFRSF1A-201ENST00000162749 DCAF13Q9NV06 445 aaKnown RBP18.6■□□□□ 0.57
TNFRSF1A-201ENST00000162749 ACOX3O15254 700 aa18.59■□□□□ 0.57
TNFRSF1A-201ENST00000162749 UQCRC2P22695 453 aa18.59■□□□□ 0.57
TNFRSF1A-201ENST00000162749 CHI3L1P36222 383 aaPredicted RBP18.59■□□□□ 0.57
TNFRSF1A-201ENST00000162749 CRATP43155 626 aa18.59■□□□□ 0.57
TNFRSF1A-201ENST00000162749 RPL5P46777 297 aaKnown RBP18.59■□□□□ 0.57
TNFRSF1A-201ENST00000162749 MAP7Q14244 749 aa18.59■□□□□ 0.57
TNFRSF1A-201ENST00000162749 ENPP6Q6UWR7 440 aa18.59■□□□□ 0.57
TNFRSF1A-201ENST00000162749 FBXO30Q8TB52 745 aa18.59■□□□□ 0.57
TNFRSF1A-201ENST00000162749 AMDHD1Q96NU7 426 aa18.59■□□□□ 0.57
TNFRSF1A-201ENST00000162749 TGM7Q96PF1 710 aa18.59■□□□□ 0.57
TNFRSF1A-201ENST00000162749 MRPS26Q9BYN8 205 aaKnown RBP18.59■□□□□ 0.57
TNFRSF1A-201ENST00000162749 GLIPR2Q9H4G4 154 aa18.59■□□□□ 0.57
TNFRSF1A-201ENST00000162749 STARD5Q9NSY2 213 aa18.59■□□□□ 0.57
TNFRSF1A-201ENST00000162749 KCMF1Q9P0J7 381 aa18.59■□□□□ 0.57
TNFRSF1A-201ENST00000162749 RNF103-CHMP3A0A140T963 221 aa18.59■□□□□ 0.57
TNFRSF1A-201ENST00000162749 ERAL1O75616 437 aaKnown RBP18.59■□□□□ 0.57
TNFRSF1A-201ENST00000162749 ZNF10P21506 573 aaPredicted RBP18.59■□□□□ 0.57
TNFRSF1A-201ENST00000162749 EPHA8P29322 1005 aaPredicted RBP18.59■□□□□ 0.57
TNFRSF1A-201ENST00000162749 RNF130Q86XS8 419 aa18.59■□□□□ 0.57
TNFRSF1A-201ENST00000162749 PSMA8Q8TAA3 256 aa18.59■□□□□ 0.57
TNFRSF1A-201ENST00000162749 NCSTNQ92542 709 aa18.59■□□□□ 0.57
TNFRSF1A-201ENST00000162749 TFAP2CQ92754 450 aa18.59■□□□□ 0.57
TNFRSF1A-201ENST00000162749 MAL2Q969L2 176 aa18.59■□□□□ 0.57
TNFRSF1A-201ENST00000162749 RNF145Q96MT1 663 aa18.59■□□□□ 0.57
TNFRSF1A-201ENST00000162749 RAB33BQ9H082 229 aa18.59■□□□□ 0.57
TNFRSF1A-201ENST00000162749 EPB41L1Q9H4G0 881 aa18.59■□□□□ 0.57
TNFRSF1A-201ENST00000162749 EPS8L2Q9H6S3 715 aa18.59■□□□□ 0.57
TNFRSF1A-201ENST00000162749 FSCN3Q9NQT6 498 aa18.59■□□□□ 0.57
TNFRSF1A-201ENST00000162749 PAPOLBQ9NRJ5 636 aaKnown RBP18.59■□□□□ 0.57
TNFRSF1A-201ENST00000162749 DAPP1Q9UN19 280 aa18.59■□□□□ 0.57
TNFRSF1A-201ENST00000162749 ASCC3Q8N3C0 2202 aaKnown RBP18.59■□□□□ 0.57
TNFRSF1A-201ENST00000162749 TLCD2A6NGC4 264 aa18.58■□□□□ 0.57
TNFRSF1A-201ENST00000162749 B3GALT2O43825 422 aa18.58■□□□□ 0.57
TNFRSF1A-201ENST00000162749 DNAJB6O75190 326 aa18.58■□□□□ 0.57
TNFRSF1A-201ENST00000162749 TNFRSF21O75509 655 aa18.58■□□□□ 0.57
TNFRSF1A-201ENST00000162749 NR2F6P10588 404 aa18.58■□□□□ 0.57
TNFRSF1A-201ENST00000162749 ETFAP13804 333 aa18.58■□□□□ 0.57
TNFRSF1A-201ENST00000162749 ATP6V1B1P15313 513 aa18.58■□□□□ 0.57
TNFRSF1A-201ENST00000162749 GLB1P16278 677 aa18.58■□□□□ 0.57
TNFRSF1A-201ENST00000162749 GSTT1P30711 240 aa18.58■□□□□ 0.57
TNFRSF1A-201ENST00000162749 CDK9P50750 372 aaKnown RBP18.58■□□□□ 0.57
TNFRSF1A-201ENST00000162749 LIM2P55344 173 aa18.58■□□□□ 0.57
TNFRSF1A-201ENST00000162749 FADDQ13158 208 aa18.58■□□□□ 0.57
TNFRSF1A-201ENST00000162749 RUNX2Q13950 521 aa18.58■□□□□ 0.57
TNFRSF1A-201ENST00000162749 VEZF1Q14119 521 aa18.58■□□□□ 0.57
TNFRSF1A-201ENST00000162749 ATP6AP1Q15904 470 aa18.58■□□□□ 0.57
TNFRSF1A-201ENST00000162749 PACRGLQ8N7B6 248 aa18.58■□□□□ 0.57
TNFRSF1A-201ENST00000162749 TCTN2Q96GX1 697 aa18.58■□□□□ 0.57
TNFRSF1A-201ENST00000162749 ZC3H10Q96K80 434 aaKnown RBP18.58■□□□□ 0.57
TNFRSF1A-201ENST00000162749 NLNQ9BYT8 704 aa18.58■□□□□ 0.57
TNFRSF1A-201ENST00000162749 ANKRD60Q9BZ19 345 aa18.58■□□□□ 0.57
TNFRSF1A-201ENST00000162749 EPHA6Q9UF33 1036 aa18.58■□□□□ 0.57
TNFRSF1A-201ENST00000162749 OAZ3Q9UMX2 235 aa18.58■□□□□ 0.57
TNFRSF1A-201ENST00000162749 MAP4K5Q9Y4K4 846 aa18.58■□□□□ 0.57
TNFRSF1A-201ENST00000162749 IGHV5-51A0A0C4DH38 117 aa18.58■□□□□ 0.56
TNFRSF1A-201ENST00000162749 SMIM31A0A1B0GVY4 71 aa18.58■□□□□ 0.56
TNFRSF1A-201ENST00000162749 A0A1W2PS29 197 aa18.58■□□□□ 0.56
TNFRSF1A-201ENST00000162749 ZNF860A6NHJ4 632 aa18.58■□□□□ 0.56
TNFRSF1A-201ENST00000162749 SERPINA1P01009 418 aa18.58■□□□□ 0.56
TNFRSF1A-201ENST00000162749 MT-ND1P03886 318 aa18.58■□□□□ 0.56
TNFRSF1A-201ENST00000162749 MYF5P13349 255 aa18.58■□□□□ 0.56
TNFRSF1A-201ENST00000162749 OR1D5P58170 312 aa18.58■□□□□ 0.56
TNFRSF1A-201ENST00000162749 TNFRSF17Q02223 184 aa18.58■□□□□ 0.56
TNFRSF1A-201ENST00000162749 VAC14Q08AM6 782 aa18.58■□□□□ 0.56
TNFRSF1A-201ENST00000162749 NKG7Q16617 165 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 247.7 ms