RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 TBPL2Q6SJ96 375 aa16.37■□□□□ 0.21
PHGDH-208ENST00000641023 CEACAM20Q6UY09 585 aa16.37■□□□□ 0.21
PHGDH-208ENST00000641023 C6orf120Q7Z4R8 191 aa16.37■□□□□ 0.21
PHGDH-208ENST00000641023 CARM1Q86X55 608 aa16.37■□□□□ 0.21
PHGDH-208ENST00000641023 ZNF761Q86XN6 746 aaPredicted RBP16.37■□□□□ 0.21
PHGDH-208ENST00000641023 LMX1AQ8TE12 382 aa16.37■□□□□ 0.21
PHGDH-208ENST00000641023 TPD52L3Q96J77 140 aa16.37■□□□□ 0.21
PHGDH-208ENST00000641023 AMDHD1Q96NU7 426 aa16.37■□□□□ 0.21
PHGDH-208ENST00000641023 KLHL25Q9H0H3 589 aa16.37■□□□□ 0.21
PHGDH-208ENST00000641023 GLIPR2Q9H4G4 154 aa16.37■□□□□ 0.21
PHGDH-208ENST00000641023 ZSCAN32Q9NX65 697 aa16.37■□□□□ 0.21
PHGDH-208ENST00000641023 PSME2Q9UL46 239 aa16.37■□□□□ 0.21
PHGDH-208ENST00000641023 ENTPD4Q9Y227 616 aa16.37■□□□□ 0.21
PHGDH-208ENST00000641023 KNL1Q8NG31 2342 aa16.37■□□□□ 0.21
PHGDH-208ENST00000641023 VILLO15195 856 aa16.36■□□□□ 0.21
PHGDH-208ENST00000641023 ZSCAN9O15535 394 aaPredicted RBP16.36■□□□□ 0.21
PHGDH-208ENST00000641023 SH3BP5O60239 455 aa16.36■□□□□ 0.21
PHGDH-208ENST00000641023 TNFAIP8O95379 198 aa16.36■□□□□ 0.21
PHGDH-208ENST00000641023 IFNA14P01570 189 aa16.36■□□□□ 0.21
PHGDH-208ENST00000641023 CCT3P49368 545 aaKnown RBP16.36■□□□□ 0.21
PHGDH-208ENST00000641023 NCBP2P52298 156 aaKnown RBP eCLIP16.36■□□□□ 0.21
PHGDH-208ENST00000641023 ARHGDIAP52565 204 aa16.36■□□□□ 0.21
PHGDH-208ENST00000641023 SELENOWP63302 87 aa16.36■□□□□ 0.21
PHGDH-208ENST00000641023 DAG1Q14118 895 aa16.36■□□□□ 0.21
PHGDH-208ENST00000641023 CYBRD1Q53TN4 286 aa16.36■□□□□ 0.21
PHGDH-208ENST00000641023 MANEAQ5SRI9 462 aa16.36■□□□□ 0.21
PHGDH-208ENST00000641023 ABHD13Q7L211 337 aa16.36■□□□□ 0.21
PHGDH-208ENST00000641023 VTCN1Q7Z7D3 282 aa16.36■□□□□ 0.21
PHGDH-208ENST00000641023 ZC3H7AQ8IWR0 971 aaKnown RBP16.36■□□□□ 0.21
PHGDH-208ENST00000641023 ST13P4Q8IZP2 240 aaPredicted RBP16.36■□□□□ 0.21
PHGDH-208ENST00000641023 NFKBIDQ8NI38 313 aa16.36■□□□□ 0.21
PHGDH-208ENST00000641023 DOHHQ9BU89 302 aa16.36■□□□□ 0.21
PHGDH-208ENST00000641023 TMEM121BQ9BXQ6 578 aaPredicted RBP16.36■□□□□ 0.21
PHGDH-208ENST00000641023 SIRT3Q9NTG7 399 aaPredicted RBP16.36■□□□□ 0.21
PHGDH-208ENST00000641023 GIMAP4Q9NUV9 329 aa16.36■□□□□ 0.21
PHGDH-208ENST00000641023 PGRMC2O15173 223 aa16.36■□□□□ 0.21
PHGDH-208ENST00000641023 PRKRAO75569 313 aaKnown RBP16.36■□□□□ 0.21
PHGDH-208ENST00000641023 HPRP00739 348 aa16.36■□□□□ 0.21
PHGDH-208ENST00000641023 SEMG1P04279 462 aa16.36■□□□□ 0.21
PHGDH-208ENST00000641023 BUD31P41223 144 aaPredicted RBP16.36■□□□□ 0.21
PHGDH-208ENST00000641023 LSSP48449 732 aa16.36■□□□□ 0.21
PHGDH-208ENST00000641023 CDK9P50750 372 aaKnown RBP16.36■□□□□ 0.21
PHGDH-208ENST00000641023 HNRNPKP61978 463 aaKnown RBP eCLIP16.36■□□□□ 0.213e-7■□□□□ 8.5
PHGDH-208ENST00000641023 GK3PQ14409 553 aa16.36■□□□□ 0.21
PHGDH-208ENST00000641023 SLC36A3Q495N2 470 aa16.36■□□□□ 0.21
PHGDH-208ENST00000641023 C18orf63Q68DL7 685 aa16.36■□□□□ 0.21
PHGDH-208ENST00000641023 CCDC80Q76M96 950 aa16.36■□□□□ 0.21
PHGDH-208ENST00000641023 DHRSXQ8N5I4 330 aa16.36■□□□□ 0.21
PHGDH-208ENST00000641023 OR5K1Q8NHB7 308 aa16.36■□□□□ 0.21
PHGDH-208ENST00000641023 LZICQ8WZA0 190 aa16.36■□□□□ 0.21
PHGDH-208ENST00000641023 TBC1D20Q96BZ9 403 aa16.36■□□□□ 0.21
PHGDH-208ENST00000641023 SERINC2Q96SA4 455 aa16.36■□□□□ 0.21
PHGDH-208ENST00000641023 CD320Q9NPF0 282 aa16.36■□□□□ 0.21
PHGDH-208ENST00000641023 SEMA3GQ9NS98 782 aa16.36■□□□□ 0.21
PHGDH-208ENST00000641023 EVA1BQ9NVM1 165 aa16.36■□□□□ 0.21
PHGDH-208ENST00000641023 ANGPT4Q9Y264 503 aa16.36■□□□□ 0.21
PHGDH-208ENST00000641023 A6NHS1 94 aa16.35■□□□□ 0.21
PHGDH-208ENST00000641023 WASHC1A8K0Z3 465 aa16.35■□□□□ 0.21
PHGDH-208ENST00000641023 GCM2O75603 506 aaPredicted RBP16.35■□□□□ 0.21
PHGDH-208ENST00000641023 SMNDC1O75940 238 aaKnown RBP eCLIP16.35■□□□□ 0.21
PHGDH-208ENST00000641023 ALPLP05186 524 aa16.35■□□□□ 0.21
PHGDH-208ENST00000641023 SMIM10L1P0DMW3 83 aa16.35■□□□□ 0.21
PHGDH-208ENST00000641023 ARAFP10398 606 aa16.35■□□□□ 0.21
PHGDH-208ENST00000641023 PVRP15151 417 aa16.35■□□□□ 0.21
PHGDH-208ENST00000641023 TYRP1P17643 537 aa16.35■□□□□ 0.21
PHGDH-208ENST00000641023 MPIP34949 423 aa16.35■□□□□ 0.21
PHGDH-208ENST00000641023 FASLGP48023 281 aa16.35■□□□□ 0.21
PHGDH-208ENST00000641023 RXRGP48443 463 aa16.35■□□□□ 0.21
PHGDH-208ENST00000641023 CRYBA2P53672 197 aa16.35■□□□□ 0.21
PHGDH-208ENST00000641023 CRB2Q5IJ48 1285 aa16.35■□□□□ 0.21
PHGDH-208ENST00000641023 OR2T5Q6IEZ7 315 aa16.35■□□□□ 0.21
PHGDH-208ENST00000641023 FRMPD2BQ6IN97 320 aa16.35■□□□□ 0.21
PHGDH-208ENST00000641023 BHLHB9Q6PI77 547 aa16.35■□□□□ 0.21
PHGDH-208ENST00000641023 RNF44Q7L0R7 432 aa16.35■□□□□ 0.21
PHGDH-208ENST00000641023 PIWIL3Q7Z3Z3 882 aaKnown RBP16.35■□□□□ 0.21
PHGDH-208ENST00000641023 HIPK1Q86Z02 1210 aa16.35■□□□□ 0.21
PHGDH-208ENST00000641023 OR2T29Q8NH02 315 aa16.35■□□□□ 0.21
PHGDH-208ENST00000641023 RSC1A1Q92681 617 aa16.35■□□□□ 0.21
PHGDH-208ENST00000641023 SMIM10Q96HG1 83 aa16.35■□□□□ 0.21
PHGDH-208ENST00000641023 MAPKAP1Q9BPZ7 522 aa16.35■□□□□ 0.21
PHGDH-208ENST00000641023 RBM4BQ9BQ04 359 aaKnown RBP16.35■□□□□ 0.21
PHGDH-208ENST00000641023 RBM4Q9BWF3 364 aaKnown RBP16.35■□□□□ 0.21
PHGDH-208ENST00000641023 PRDM6Q9NQX0 595 aa16.35■□□□□ 0.21
PHGDH-208ENST00000641023 THUMPD1Q9NXG2 353 aaKnown RBP16.35■□□□□ 0.21
PHGDH-208ENST00000641023 CES1P1Q9UKY3 287 aa16.35■□□□□ 0.21
PHGDH-208ENST00000641023 SNX11Q9Y5W9 270 aa16.35■□□□□ 0.21
PHGDH-208ENST00000641023 LOC105369274A0A096LPK9 316 aa16.34■□□□□ 0.21
PHGDH-208ENST00000641023 LOC102723532A0A0G2JNH3 316 aa16.34■□□□□ 0.21
PHGDH-208ENST00000641023 MYO1GB0I1T2 1018 aa16.34■□□□□ 0.21
PHGDH-208ENST00000641023 H0YGG7 62 aa16.34■□□□□ 0.21
PHGDH-208ENST00000641023 M0QX08 132 aa16.34■□□□□ 0.21
PHGDH-208ENST00000641023 EIF2S1P05198 315 aaKnown RBP16.34■□□□□ 0.21
PHGDH-208ENST00000641023 DCNP07585 359 aaKnown RBP16.34■□□□□ 0.21
PHGDH-208ENST00000641023 IST1P53990 364 aa16.34■□□□□ 0.21
PHGDH-208ENST00000641023 ARF3P61204 181 aaPredicted RBP16.34■□□□□ 0.21
PHGDH-208ENST00000641023 EEF1A2Q05639 463 aaKnown RBP16.34■□□□□ 0.21
PHGDH-208ENST00000641023 TP53BP2Q13625 1128 aa16.34■□□□□ 0.21
PHGDH-208ENST00000641023 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.34■□□□□ 0.21
PHGDH-208ENST00000641023 OR4N4Q8N0Y3 316 aa16.34■□□□□ 0.21
PHGDH-208ENST00000641023 SDR16C5Q8N3Y7 309 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms