RNA–Protein interactions for RNA: ENST00000640728.1

SPIN3-244, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,954 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-244ENST00000640728 RNF215Q9Y6U7 377 aa20.17■□□□□ 0.82
SPIN3-244ENST00000640728 RNF103-CHMP3A0A140T963 221 aa20.17■□□□□ 0.82
SPIN3-244ENST00000640728 RHPN2P1A8MT19 583 aa20.17■□□□□ 0.82
SPIN3-244ENST00000640728 MYO1GB0I1T2 1018 aa20.17■□□□□ 0.82
SPIN3-244ENST00000640728 RPSAP08865 295 aaKnown RBP20.17■□□□□ 0.82
SPIN3-244ENST00000640728 ZNF10P21506 573 aaPredicted RBP20.17■□□□□ 0.82
SPIN3-244ENST00000640728 PCGF2P35227 344 aa20.17■□□□□ 0.82
SPIN3-244ENST00000640728 CDK9P50750 372 aaKnown RBP20.17■□□□□ 0.82
SPIN3-244ENST00000640728 CCT8P50990 548 aa20.17■□□□□ 0.82
SPIN3-244ENST00000640728 EPHA4P54764 986 aa20.17■□□□□ 0.82
SPIN3-244ENST00000640728 CASP9P55211 416 aa20.17■□□□□ 0.82
SPIN3-244ENST00000640728 VSX2P58304 361 aaPredicted RBP20.17■□□□□ 0.82
SPIN3-244ENST00000640728 RUNX2Q13950 521 aa20.17■□□□□ 0.82
SPIN3-244ENST00000640728 SAXO2Q658L1 398 aa20.17■□□□□ 0.82
SPIN3-244ENST00000640728 C11orf65Q8NCR3 313 aa20.17■□□□□ 0.82
SPIN3-244ENST00000640728 ICA1LQ8NDH6 482 aa20.17■□□□□ 0.82
SPIN3-244ENST00000640728 MAL2Q969L2 176 aa20.17■□□□□ 0.82
SPIN3-244ENST00000640728 NEURL3Q96EH8 262 aa20.17■□□□□ 0.82
SPIN3-244ENST00000640728 COQ10BQ9H8M1 238 aa20.17■□□□□ 0.82
SPIN3-244ENST00000640728 PILRBQ9UKJ0 227 aa20.17■□□□□ 0.82
SPIN3-244ENST00000640728 LRCH1Q9Y2L9 728 aa20.17■□□□□ 0.82
SPIN3-244ENST00000640728 THADAQ6YHU6 1953 aa20.16■□□□□ 0.82
SPIN3-244ENST00000640728 B3GALT2O43825 422 aa20.16■□□□□ 0.82
SPIN3-244ENST00000640728 MT-ND1P03886 318 aa20.16■□□□□ 0.82
SPIN3-244ENST00000640728 PLK5Q496M5 336 aa20.16■□□□□ 0.82
SPIN3-244ENST00000640728 GCNT6Q5T4J0 391 aa20.16■□□□□ 0.82
SPIN3-244ENST00000640728 SWT1Q5T5J6 900 aaKnown RBP20.16■□□□□ 0.82
SPIN3-244ENST00000640728 TLDC1Q6P9B6 456 aa20.16■□□□□ 0.82
SPIN3-244ENST00000640728 DNAJC22Q8N4W6 341 aa20.16■□□□□ 0.82
SPIN3-244ENST00000640728 CNRIP1Q96F85 164 aaPredicted RBP20.16■□□□□ 0.82
SPIN3-244ENST00000640728 SLC47A1Q96FL8 570 aa20.16■□□□□ 0.82
SPIN3-244ENST00000640728 RAB33BQ9H082 229 aa20.16■□□□□ 0.82
SPIN3-244ENST00000640728 TMEM38AQ9H6F2 299 aa20.16■□□□□ 0.82
SPIN3-244ENST00000640728 MAGIXQ9H6Y5 334 aa20.16■□□□□ 0.82
SPIN3-244ENST00000640728 LRIT1Q9P2V4 623 aa20.16■□□□□ 0.82
SPIN3-244ENST00000640728 PHF11Q9UIL8 331 aa20.16■□□□□ 0.82
SPIN3-244ENST00000640728 DNAJB6O75190 326 aa20.15■□□□□ 0.82
SPIN3-244ENST00000640728 ERAL1O75616 437 aaKnown RBP20.15■□□□□ 0.82
SPIN3-244ENST00000640728 LDLRP01130 860 aa20.15■□□□□ 0.82
SPIN3-244ENST00000640728 NR2F6P10588 404 aa20.15■□□□□ 0.82
SPIN3-244ENST00000640728 CKMT2P17540 419 aa20.15■□□□□ 0.82
SPIN3-244ENST00000640728 NTSP30990 170 aa20.15■□□□□ 0.82
SPIN3-244ENST00000640728 ARRB1P49407 418 aaPredicted RBP20.15■□□□□ 0.82
SPIN3-244ENST00000640728 LIM2P55344 173 aa20.15■□□□□ 0.82
SPIN3-244ENST00000640728 RBBP4Q09028 425 aa20.15■□□□□ 0.82
SPIN3-244ENST00000640728 ZC3H12BQ5HYM0 836 aaKnown RBP20.15■□□□□ 0.82
SPIN3-244ENST00000640728 FAM92BQ6ZTR7 304 aa20.15■□□□□ 0.82
SPIN3-244ENST00000640728 MCATQ8IVS2 390 aaKnown RBP20.15■□□□□ 0.82
SPIN3-244ENST00000640728 ARL10Q8N8L6 244 aa20.15■□□□□ 0.82
SPIN3-244ENST00000640728 TCTN2Q96GX1 697 aa20.15■□□□□ 0.82
SPIN3-244ENST00000640728 PYURFQ96I23 114 aa20.15■□□□□ 0.82
SPIN3-244ENST00000640728 BBS4Q96RK4 519 aa20.15■□□□□ 0.82
SPIN3-244ENST00000640728 CIB1Q99828 191 aa20.15■□□□□ 0.82
SPIN3-244ENST00000640728 CCDC3Q9BQI4 270 aa20.15■□□□□ 0.82
SPIN3-244ENST00000640728 ASPSCR1Q9BZE9 553 aa20.15■□□□□ 0.82
SPIN3-244ENST00000640728 YY1AP1Q9H869 796 aa20.15■□□□□ 0.82
SPIN3-244ENST00000640728 EPHA6Q9UF33 1036 aa20.15■□□□□ 0.82
SPIN3-244ENST00000640728 DAPP1Q9UN19 280 aa20.15■□□□□ 0.82
SPIN3-244ENST00000640728 SAMD4AQ9UPU9 718 aaKnown RBP20.15■□□□□ 0.82
SPIN3-244ENST00000640728 SLC22A7Q9Y694 548 aa20.15■□□□□ 0.82
SPIN3-244ENST00000640728 HRO43593 1189 aa20.15■□□□□ 0.82
SPIN3-244ENST00000640728 KIF1CO43896 1103 aaKnown RBP20.15■□□□□ 0.82
SPIN3-244ENST00000640728 B4GALT2O60909 372 aa20.15■□□□□ 0.82
SPIN3-244ENST00000640728 HOXB6P17509 224 aaKnown RBP20.15■□□□□ 0.82
SPIN3-244ENST00000640728 NCBP2P52298 156 aaKnown RBP eCLIP20.15■□□□□ 0.82
SPIN3-244ENST00000640728 CEBPEQ15744 281 aa20.15■□□□□ 0.82
SPIN3-244ENST00000640728 LRRC23Q53EV4 343 aaPredicted RBP20.15■□□□□ 0.82
SPIN3-244ENST00000640728 ZFP28Q8NHY6 868 aa20.15■□□□□ 0.82
SPIN3-244ENST00000640728 SUN3Q8TAQ9 357 aa20.15■□□□□ 0.82
SPIN3-244ENST00000640728 C10orf90Q96M02 699 aa20.15■□□□□ 0.82
SPIN3-244ENST00000640728 BTBD9Q96Q07 612 aa20.15■□□□□ 0.82
SPIN3-244ENST00000640728 SLC29A1Q99808 456 aa20.15■□□□□ 0.82
SPIN3-244ENST00000640728 SUSD2Q9UGT4 822 aa20.15■□□□□ 0.82
SPIN3-244ENST00000640728 TECTAO75443 2155 aa20.15■□□□□ 0.82
SPIN3-244ENST00000640728 CLOCKO15516 846 aa20.14■□□□□ 0.81
SPIN3-244ENST00000640728 NUDT21O43809 227 aaKnown RBP20.14■□□□□ 0.81
SPIN3-244ENST00000640728 C9P02748 559 aa20.14■□□□□ 0.81
SPIN3-244ENST00000640728 CPN2P22792 545 aa20.14■□□□□ 0.81
SPIN3-244ENST00000640728 BUD31P41223 144 aaPredicted RBP20.14■□□□□ 0.81
SPIN3-244ENST00000640728 CCT3P49368 545 aaKnown RBP20.14■□□□□ 0.81
SPIN3-244ENST00000640728 PRIM2P49643 509 aa20.14■□□□□ 0.81
SPIN3-244ENST00000640728 TNFRSF17Q02223 184 aa20.14■□□□□ 0.81
SPIN3-244ENST00000640728 EEF1A2Q05639 463 aaKnown RBP20.14■□□□□ 0.81
SPIN3-244ENST00000640728 ZNF750Q32MQ0 723 aa20.14■□□□□ 0.81
SPIN3-244ENST00000640728 C6orf120Q7Z4R8 191 aa20.14■□□□□ 0.81
SPIN3-244ENST00000640728 SLC35F3Q8IY50 421 aa20.14■□□□□ 0.81
SPIN3-244ENST00000640728 GALNT4Q8N4A0 578 aa20.14■□□□□ 0.81
SPIN3-244ENST00000640728 ARHGEF39Q8N4T4 335 aa20.14■□□□□ 0.81
SPIN3-244ENST00000640728 ZNF681Q96N22 645 aa20.14■□□□□ 0.81
SPIN3-244ENST00000640728 VCXQ9H320 206 aa20.14■□□□□ 0.81
SPIN3-244ENST00000640728 LYRM4Q9HD34 91 aa20.14■□□□□ 0.81
SPIN3-244ENST00000640728 STARD5Q9NSY2 213 aa20.14■□□□□ 0.81
SPIN3-244ENST00000640728 PSME2Q9UL46 239 aa20.14■□□□□ 0.81
SPIN3-244ENST00000640728 PADI4Q9UM07 663 aa20.14■□□□□ 0.81
SPIN3-244ENST00000640728 H0YJX3 145 aa20.14■□□□□ 0.81
SPIN3-244ENST00000640728 SRPX2O60687 465 aaPredicted RBP20.14■□□□□ 0.81
SPIN3-244ENST00000640728 GCM2O75603 506 aaPredicted RBP20.14■□□□□ 0.81
SPIN3-244ENST00000640728 CTSBP07858 339 aa20.14■□□□□ 0.81
SPIN3-244ENST00000640728 CSNK2A2P19784 350 aaPredicted RBP20.14■□□□□ 0.81
SPIN3-244ENST00000640728 ALDH4A1P30038 563 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms