RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 CCNYL2Q5T2Q4 361 aa13.12□□□□□ -0.31
SNRPA1-216ENST00000626000 B3GNTL1Q67FW5 361 aaPredicted RBP13.12□□□□□ -0.31
SNRPA1-216ENST00000626000 ACSM2BQ68CK6 577 aa13.12□□□□□ -0.31
SNRPA1-216ENST00000626000 MRM1Q6IN84 353 aaKnown RBP13.12□□□□□ -0.31
SNRPA1-216ENST00000626000 H3F3CQ6NXT2 135 aa13.12□□□□□ -0.31
SNRPA1-216ENST00000626000 COMMD6Q7Z4G1 85 aa13.12□□□□□ -0.31
SNRPA1-216ENST00000626000 SAMD14Q8IZD0 417 aaPredicted RBP13.12□□□□□ -0.31
SNRPA1-216ENST00000626000 MORN4Q8NDC4 146 aa13.12□□□□□ -0.31
SNRPA1-216ENST00000626000 B3GNT7Q8NFL0 401 aa13.12□□□□□ -0.31
SNRPA1-216ENST00000626000 FAM76AQ8TAV0 307 aa13.12□□□□□ -0.31
SNRPA1-216ENST00000626000 MTFMTQ96DP5 389 aaKnown RBP13.12□□□□□ -0.31
SNRPA1-216ENST00000626000 VMP1Q96GC9 406 aa13.12□□□□□ -0.31
SNRPA1-216ENST00000626000 CCT7Q99832 543 aa13.12□□□□□ -0.31
SNRPA1-216ENST00000626000 ZNF717Q9BY31 904 aaPredicted RBP13.12□□□□□ -0.31
SNRPA1-216ENST00000626000 KCNK13Q9HB14 408 aa13.12□□□□□ -0.31
SNRPA1-216ENST00000626000 NECTIN3Q9NQS3 549 aa13.12□□□□□ -0.31
SNRPA1-216ENST00000626000 ZNF225Q9UK10 706 aa13.12□□□□□ -0.31
SNRPA1-216ENST00000626000 FBXW2Q9UKT8 454 aa13.12□□□□□ -0.31
SNRPA1-216ENST00000626000 DOCK10Q96BY6 2186 aa13.12□□□□□ -0.31
SNRPA1-216ENST00000626000 C1orf226A1L170 272 aa13.11□□□□□ -0.31
SNRPA1-216ENST00000626000 PPP6CO00743 305 aa13.11□□□□□ -0.31
SNRPA1-216ENST00000626000 DNAJB6O75190 326 aa13.11□□□□□ -0.31
SNRPA1-216ENST00000626000 SH3BGRLO75368 114 aa13.11□□□□□ -0.31
SNRPA1-216ENST00000626000 SPAG7O75391 227 aa13.11□□□□□ -0.31
SNRPA1-216ENST00000626000 MYO1DO94832 1006 aa13.11□□□□□ -0.31
SNRPA1-216ENST00000626000 ETHE1O95571 254 aa13.11□□□□□ -0.31
SNRPA1-216ENST00000626000 PRB1P04280 392 aa13.11□□□□□ -0.31
SNRPA1-216ENST00000626000 IFNA16P05015 189 aa13.11□□□□□ -0.31
SNRPA1-216ENST00000626000 KLK1P06870 262 aa13.11□□□□□ -0.31
SNRPA1-216ENST00000626000 GRK2P25098 689 aa13.11□□□□□ -0.31
SNRPA1-216ENST00000626000 SOX11P35716 441 aa13.11□□□□□ -0.31
SNRPA1-216ENST00000626000 CLCN2P51788 898 aa13.11□□□□□ -0.31
SNRPA1-216ENST00000626000 EFNA3P52797 238 aa13.11□□□□□ -0.31
SNRPA1-216ENST00000626000 SLC18A1P54219 525 aa13.11□□□□□ -0.31
SNRPA1-216ENST00000626000 IGLV3-21P80748 117 aaPredicted RBP13.11□□□□□ -0.31
SNRPA1-216ENST00000626000 Q0VFX4 171 aa13.11□□□□□ -0.31
SNRPA1-216ENST00000626000 RAPSNQ13702 412 aa13.11□□□□□ -0.31
SNRPA1-216ENST00000626000 INAQ16352 499 aa13.11□□□□□ -0.31
SNRPA1-216ENST00000626000 GALNT18Q6P9A2 607 aa13.11□□□□□ -0.31
SNRPA1-216ENST00000626000 RPS27LQ71UM5 84 aaKnown RBP13.11□□□□□ -0.31
SNRPA1-216ENST00000626000 PRICKLE2Q7Z3G6 844 aa13.11□□□□□ -0.31
SNRPA1-216ENST00000626000 TRIM46Q7Z4K8 759 aa13.11□□□□□ -0.31
SNRPA1-216ENST00000626000 TMEM151BQ8IW70 566 aa13.11□□□□□ -0.31
SNRPA1-216ENST00000626000 HORMAD2Q8N7B1 307 aa13.11□□□□□ -0.31
SNRPA1-216ENST00000626000 PPP1R14CQ8TAE6 165 aa13.11□□□□□ -0.31
SNRPA1-216ENST00000626000 SUN3Q8TAQ9 357 aa13.11□□□□□ -0.31
SNRPA1-216ENST00000626000 BRIX1Q8TDN6 353 aaKnown RBP13.11□□□□□ -0.31
SNRPA1-216ENST00000626000 RBM18Q96H35 190 aaKnown RBP13.11□□□□□ -0.31
SNRPA1-216ENST00000626000 DGAT2Q96PD7 388 aa13.11□□□□□ -0.31
SNRPA1-216ENST00000626000 CSF3RQ99062 836 aa13.11□□□□□ -0.31
SNRPA1-216ENST00000626000 GATA5Q9BWX5 397 aaPredicted RBP13.11□□□□□ -0.31
SNRPA1-216ENST00000626000 MRPL1Q9BYD6 325 aaKnown RBP13.11□□□□□ -0.31
SNRPA1-216ENST00000626000 ALOXE3Q9BYJ1 711 aa13.11□□□□□ -0.31
SNRPA1-216ENST00000626000 ILKAPQ9H0C8 392 aaPredicted RBP13.11□□□□□ -0.31
SNRPA1-216ENST00000626000 SLAMF7Q9NQ25 335 aa13.11□□□□□ -0.31
SNRPA1-216ENST00000626000 SIRT5Q9NXA8 310 aa13.11□□□□□ -0.31
SNRPA1-216ENST00000626000 COPS7AQ9UBW8 275 aa13.11□□□□□ -0.31
SNRPA1-216ENST00000626000 MCM8Q9UJA3 840 aa13.11□□□□□ -0.31
SNRPA1-216ENST00000626000 ASB4Q9Y574 426 aa13.11□□□□□ -0.31
SNRPA1-216ENST00000626000 BOD1L1Q8NFC6 3051 aa13.11□□□□□ -0.31
SNRPA1-216ENST00000626000 SLC28A1O00337 649 aa13.1□□□□□ -0.31
SNRPA1-216ENST00000626000 FCHO1O14526 889 aa13.1□□□□□ -0.31
SNRPA1-216ENST00000626000 AZIN1O14977 448 aa13.1□□□□□ -0.31
SNRPA1-216ENST00000626000 RGS14O43566 566 aa13.1□□□□□ -0.31
SNRPA1-216ENST00000626000 SLC28A2O43868 658 aa13.1□□□□□ -0.31
SNRPA1-216ENST00000626000 EEDO75530 441 aaKnown RBP13.1□□□□□ -0.31
SNRPA1-216ENST00000626000 RSL1D1O76021 490 aaKnown RBP13.1□□□□□ -0.31
SNRPA1-216ENST00000626000 GPR75O95800 540 aa13.1□□□□□ -0.31
SNRPA1-216ENST00000626000 PDGFAP04085 211 aa13.1□□□□□ -0.31
SNRPA1-216ENST00000626000 BPGMP07738 259 aa13.1□□□□□ -0.31
SNRPA1-216ENST00000626000 FGF4P08620 206 aa13.1□□□□□ -0.31
SNRPA1-216ENST00000626000 ALDH3A1P30838 453 aa13.1□□□□□ -0.31
SNRPA1-216ENST00000626000 STT3AP46977 705 aa13.1□□□□□ -0.31
SNRPA1-216ENST00000626000 ARG2P78540 354 aa13.1□□□□□ -0.31
SNRPA1-216ENST00000626000 TBL3Q12788 808 aaKnown RBP13.1□□□□□ -0.31
SNRPA1-216ENST00000626000 CASP8Q14790 479 aa13.1□□□□□ -0.31
SNRPA1-216ENST00000626000 C6orf163Q5TEZ5 329 aa13.1□□□□□ -0.31
SNRPA1-216ENST00000626000 Q6ZS92 163 aa13.1□□□□□ -0.31
SNRPA1-216ENST00000626000 EXOC3L1Q86VI1 746 aa13.1□□□□□ -0.31
SNRPA1-216ENST00000626000 PTRH1Q86Y79 214 aaKnown RBP13.1□□□□□ -0.31
SNRPA1-216ENST00000626000 NUDCD3Q8IVD9 361 aa13.1□□□□□ -0.31
SNRPA1-216ENST00000626000 ST13P4Q8IZP2 240 aaPredicted RBP13.1□□□□□ -0.31
SNRPA1-216ENST00000626000 CLYBLQ8N0X4 340 aa13.1□□□□□ -0.31
SNRPA1-216ENST00000626000 RNF175Q8N4F7 328 aa13.1□□□□□ -0.31
SNRPA1-216ENST00000626000 OR8K3Q8NH51 312 aa13.1□□□□□ -0.31
SNRPA1-216ENST00000626000 ELP5Q8TE02 316 aa13.1□□□□□ -0.31
SNRPA1-216ENST00000626000 PSMF1Q92530 271 aa13.1□□□□□ -0.31
SNRPA1-216ENST00000626000 HAS2Q92819 552 aa13.1□□□□□ -0.31
SNRPA1-216ENST00000626000 PNO1Q9NRX1 252 aaKnown RBP13.1□□□□□ -0.31
SNRPA1-216ENST00000626000 FARSBQ9NSD9 589 aaKnown RBP13.1□□□□□ -0.31
SNRPA1-216ENST00000626000 PTGFRNQ9P2B2 879 aa13.1□□□□□ -0.31
SNRPA1-216ENST00000626000 SLC17A7Q9P2U7 560 aa13.1□□□□□ -0.31
SNRPA1-216ENST00000626000 ATG4BQ9Y4P1 393 aa13.1□□□□□ -0.31
SNRPA1-216ENST00000626000 TRAV17A0A0B4J275 112 aa13.09□□□□□ -0.31
SNRPA1-216ENST00000626000 IGHV3-20A0A0C4DH32 117 aa13.09□□□□□ -0.31
SNRPA1-216ENST00000626000 A0A1B0GTL3 188 aa13.09□□□□□ -0.31
SNRPA1-216ENST00000626000 GNG14A0A1W2PPG7 69 aa13.09□□□□□ -0.31
SNRPA1-216ENST00000626000 OR2W5A6NFC9 320 aa13.09□□□□□ -0.31
SNRPA1-216ENST00000626000 TMEM114B3SHH9 223 aa13.09□□□□□ -0.31
SNRPA1-216ENST00000626000 NPIPB8E9PQR5 432 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms