RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 LRRK2Q5S007 2527 aa10.09□□□□□ -0.79
SSBP4-215ENST00000625926 TMEM200CA6NKL6 621 aa10.08□□□□□ -0.8
SSBP4-215ENST00000625926 C17orf105B2RV13 164 aa10.08□□□□□ -0.8
SSBP4-215ENST00000625926 STX16-NPEPL1H3BU86 382 aa10.08□□□□□ -0.8
SSBP4-215ENST00000625926 FOXE1O00358 373 aaPredicted RBP10.08□□□□□ -0.8
SSBP4-215ENST00000625926 PLPP1O14494 284 aa10.08□□□□□ -0.8
SSBP4-215ENST00000625926 STX16O14662 325 aa10.08□□□□□ -0.8
SSBP4-215ENST00000625926 PEX1O43933 1283 aa10.08□□□□□ -0.8
SSBP4-215ENST00000625926 PRKNO60260 465 aaPredicted RBP10.08□□□□□ -0.8
SSBP4-215ENST00000625926 SMIM24O75264 130 aa10.08□□□□□ -0.8
SSBP4-215ENST00000625926 OR2J2O76002 312 aa10.08□□□□□ -0.8
SSBP4-215ENST00000625926 SIX3O95343 332 aaPredicted RBP10.08□□□□□ -0.8
SSBP4-215ENST00000625926 COX7A2P14406 83 aa10.08□□□□□ -0.8
SSBP4-215ENST00000625926 DCTP40126 519 aa10.08□□□□□ -0.8
SSBP4-215ENST00000625926 NEK2P51955 445 aa10.08□□□□□ -0.8
SSBP4-215ENST00000625926 RPS13P62277 151 aaKnown RBP10.08□□□□□ -0.8
SSBP4-215ENST00000625926 ID2Q02363 134 aa10.08□□□□□ -0.8
SSBP4-215ENST00000625926 CUL3Q13618 768 aa10.08□□□□□ -0.8
SSBP4-215ENST00000625926 LGSNQ5TDP6 509 aa10.08□□□□□ -0.8
SSBP4-215ENST00000625926 ZNF787Q6DD87 383 aa10.08□□□□□ -0.8
SSBP4-215ENST00000625926 SPPL2CQ8IUH8 684 aa10.08□□□□□ -0.8
SSBP4-215ENST00000625926 SIAH3Q8IW03 269 aa10.08□□□□□ -0.8
SSBP4-215ENST00000625926 SULF2Q8IWU5 870 aa10.08□□□□□ -0.8
SSBP4-215ENST00000625926 OR4N5Q8IXE1 308 aa10.08□□□□□ -0.8
SSBP4-215ENST00000625926 CYP4Z2PQ8N1L4 340 aa10.08□□□□□ -0.8
SSBP4-215ENST00000625926 CPSF7Q8N684 471 aaKnown RBP10.08□□□□□ -0.8
SSBP4-215ENST00000625926 CEP112Q8N8E3 955 aa10.08□□□□□ -0.8
SSBP4-215ENST00000625926 OR5L2Q8NGL0 311 aa10.08□□□□□ -0.8
SSBP4-215ENST00000625926 OR8K3Q8NH51 312 aa10.08□□□□□ -0.8
SSBP4-215ENST00000625926 UHMK1Q8TAS1 419 aaKnown RBP10.08□□□□□ -0.8
SSBP4-215ENST00000625926 TANKQ92844 425 aa10.08□□□□□ -0.8
SSBP4-215ENST00000625926 ANKRD9Q96BM1 317 aaPredicted RBP10.08□□□□□ -0.8
SSBP4-215ENST00000625926 PHF21BQ96EK2 531 aa10.08□□□□□ -0.8
SSBP4-215ENST00000625926 MAGED4Q96JG8 741 aa10.08□□□□□ -0.8
SSBP4-215ENST00000625926 SCYL1Q96KG9 808 aa10.08□□□□□ -0.8
SSBP4-215ENST00000625926 OR8D2Q9GZM6 311 aa10.08□□□□□ -0.8
SSBP4-215ENST00000625926 RPF2Q9H7B2 306 aaKnown RBP10.08□□□□□ -0.8
SSBP4-215ENST00000625926 NOL11Q9H8H0 719 aaKnown RBP10.08□□□□□ -0.8
SSBP4-215ENST00000625926 LIN28AQ9H9Z2 209 aaKnown RBP10.08□□□□□ -0.8
SSBP4-215ENST00000625926 TIMMDC1Q9NPL8 285 aa10.08□□□□□ -0.8
SSBP4-215ENST00000625926 MYOTQ9UBF9 498 aa10.08□□□□□ -0.8
SSBP4-215ENST00000625926 PHF11Q9UIL8 331 aa10.08□□□□□ -0.8
SSBP4-215ENST00000625926 SH3BGRL2Q9UJC5 107 aa10.08□□□□□ -0.8
SSBP4-215ENST00000625926 ERVK-11Q9UQG0 969 aa10.08□□□□□ -0.8
SSBP4-215ENST00000625926 ZNF835Q9Y2P0 537 aa10.08□□□□□ -0.8
SSBP4-215ENST00000625926 RNF11Q9Y3C5 154 aa10.08□□□□□ -0.8
SSBP4-215ENST00000625926 A8MVJ9 347 aa10.07□□□□□ -0.8
SSBP4-215ENST00000625926 TRIM49D1C9J1S8 452 aa10.07□□□□□ -0.8
SSBP4-215ENST00000625926 WWP2O00308 870 aa10.07□□□□□ -0.8
SSBP4-215ENST00000625926 OR7A17O14581 309 aa10.07□□□□□ -0.8
SSBP4-215ENST00000625926 PROM1O43490 865 aa10.07□□□□□ -0.8
SSBP4-215ENST00000625926 DYRK3O43781 588 aa10.07□□□□□ -0.8
SSBP4-215ENST00000625926 FGF17O60258 216 aa10.07□□□□□ -0.8
SSBP4-215ENST00000625926 ETHE1O95571 254 aa10.07□□□□□ -0.8
SSBP4-215ENST00000625926 SNRPAP09012 282 aaKnown RBP10.07□□□□□ -0.8
SSBP4-215ENST00000625926 ESRRAP11474 423 aaPredicted RBP10.07□□□□□ -0.8
SSBP4-215ENST00000625926 ARL1P40616 181 aaPredicted RBP10.07□□□□□ -0.8
SSBP4-215ENST00000625926 BUD31P41223 144 aaPredicted RBP10.07□□□□□ -0.8
SSBP4-215ENST00000625926 STT3AP46977 705 aa10.07□□□□□ -0.8
SSBP4-215ENST00000625926 MEOX1P50221 254 aa10.07□□□□□ -0.8
SSBP4-215ENST00000625926 CCNG1P51959 295 aa10.07□□□□□ -0.8
SSBP4-215ENST00000625926 RNF4P78317 190 aa10.07□□□□□ -0.8
SSBP4-215ENST00000625926 IGLV3-21P80748 117 aaPredicted RBP10.07□□□□□ -0.8
SSBP4-215ENST00000625926 C3AR1Q16581 482 aa10.07□□□□□ -0.8
SSBP4-215ENST00000625926 RNFT1Q5M7Z0 435 aa10.07□□□□□ -0.8
SSBP4-215ENST00000625926 RPTNQ6XPR3 784 aa10.07□□□□□ -0.8
SSBP4-215ENST00000625926 C16orf47Q6ZP98 133 aaPredicted RBP10.07□□□□□ -0.8
SSBP4-215ENST00000625926 Q6ZPB1 254 aaPredicted RBP10.07□□□□□ -0.8
SSBP4-215ENST00000625926 MDGA2Q7Z553 956 aa10.07□□□□□ -0.8
SSBP4-215ENST00000625926 IFT20Q8IY31 132 aa10.07□□□□□ -0.8
SSBP4-215ENST00000625926 SLC34A3Q8N130 599 aa10.07□□□□□ -0.8
SSBP4-215ENST00000625926 GHDCQ8N2G8 530 aa10.07□□□□□ -0.8
SSBP4-215ENST00000625926 ZNF321PQ8N8H1 164 aa10.07□□□□□ -0.8
SSBP4-215ENST00000625926 WDR20Q8TBZ3 569 aa10.07□□□□□ -0.8
SSBP4-215ENST00000625926 SLC2A12Q8TD20 617 aa10.07□□□□□ -0.8
SSBP4-215ENST00000625926 DCAKDQ8WVC6 231 aa10.07□□□□□ -0.8
SSBP4-215ENST00000625926 ASB15Q8WXK1 588 aa10.07□□□□□ -0.8
SSBP4-215ENST00000625926 CCDC120Q96HB5 630 aa10.07□□□□□ -0.8
SSBP4-215ENST00000625926 DGAT2Q96PD7 388 aa10.07□□□□□ -0.8
SSBP4-215ENST00000625926 CDK15Q96Q40 435 aa10.07□□□□□ -0.8
SSBP4-215ENST00000625926 SERPINI1Q99574 410 aa10.07□□□□□ -0.8
SSBP4-215ENST00000625926 MRPL57Q9BQC6 102 aaKnown RBP10.07□□□□□ -0.8
SSBP4-215ENST00000625926 NTMT1Q9BV86 223 aa10.07□□□□□ -0.8
SSBP4-215ENST00000625926 DDX31Q9H8H2 851 aaKnown RBP10.07□□□□□ -0.8
SSBP4-215ENST00000625926 HPF1Q9NWY4 346 aa10.07□□□□□ -0.8
SSBP4-215ENST00000625926 LYARQ9NX58 379 aaKnown RBP10.07□□□□□ -0.8
SSBP4-215ENST00000625926 XPR1Q9UBH6 696 aa10.07□□□□□ -0.8
SSBP4-215ENST00000625926 COPS7AQ9UBW8 275 aa10.07□□□□□ -0.8
SSBP4-215ENST00000625926 NFU1Q9UMS0 254 aa10.07□□□□□ -0.8
SSBP4-215ENST00000625926 ATG4BQ9Y4P1 393 aa10.07□□□□□ -0.8
SSBP4-215ENST00000625926 PCM1Q15154 2024 aa10.07□□□□□ -0.8
SSBP4-215ENST00000625926 USP9YO00507 2555 aaPredicted RBP10.06□□□□□ -0.8
SSBP4-215ENST00000625926 EXOC1LA0A1B0GW35 172 aa10.06□□□□□ -0.8
SSBP4-215ENST00000625926 TFECO14948 347 aaPredicted RBP10.06□□□□□ -0.8
SSBP4-215ENST00000625926 EEDO75530 441 aaKnown RBP10.06□□□□□ -0.8
SSBP4-215ENST00000625926 FAM58BPP0C7Q3 252 aa10.06□□□□□ -0.8
SSBP4-215ENST00000625926 ABOP16442 354 aa10.06□□□□□ -0.8
SSBP4-215ENST00000625926 BSGP35613 385 aa10.06□□□□□ -0.8
SSBP4-215ENST00000625926 HK2P52789 917 aa10.06□□□□□ -0.8
SSBP4-215ENST00000625926 HNRNPH2P55795 449 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms