RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 C17orf64Q86WR6 236 aa3.42□□□□□ -1.86
CDR1-202ENST00000625883 BATF2Q8N1L9 274 aa3.42□□□□□ -1.86
CDR1-202ENST00000625883 CCNYQ8ND76 341 aa3.42□□□□□ -1.86
CDR1-202ENST00000625883 OR6M1Q8NGM8 313 aa3.42□□□□□ -1.86
CDR1-202ENST00000625883 PRICKLE1Q96MT3 831 aaPredicted RBP3.42□□□□□ -1.86
CDR1-202ENST00000625883 RAB40CQ96S21 281 aa3.42□□□□□ -1.86
CDR1-202ENST00000625883 KRTAP2-2Q9BYT5 123 aa3.42□□□□□ -1.86
CDR1-202ENST00000625883 XPO4Q9C0E2 1151 aaKnown RBP3.42□□□□□ -1.86
CDR1-202ENST00000625883 SLC26A1Q9H2B4 701 aa3.42□□□□□ -1.86
CDR1-202ENST00000625883 GANQ9H2C0 597 aa3.42□□□□□ -1.86
CDR1-202ENST00000625883 PARLQ9H300 379 aa3.42□□□□□ -1.86
CDR1-202ENST00000625883 ZDHHC18Q9NUE0 388 aa3.42□□□□□ -1.86
CDR1-202ENST00000625883 NINJ2Q9NZG7 142 aa3.42□□□□□ -1.86
CDR1-202ENST00000625883 NDUFA13Q9P0J0 144 aa3.42□□□□□ -1.86
CDR1-202ENST00000625883 THEGQ9P2T0 379 aa3.42□□□□□ -1.86
CDR1-202ENST00000625883 THAP10Q9P2Z0 257 aaPredicted RBP3.42□□□□□ -1.86
CDR1-202ENST00000625883 NARFQ9UHQ1 456 aa3.42□□□□□ -1.86
CDR1-202ENST00000625883 MRTO4Q9UKD2 239 aaKnown RBP3.42□□□□□ -1.86
CDR1-202ENST00000625883 DNPEPQ9ULA0 475 aa3.42□□□□□ -1.86
CDR1-202ENST00000625883 OR5H15A6NDH6 313 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 ARHGEF9O43307 516 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 HSF2BPO75031 334 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 CXCL10P02778 98 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 SFTPBP07988 381 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 ZNF18P17022 549 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 GAP43P17677 238 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 ACP1P24666 158 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 SFNP31947 248 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 LIMK2P53671 638 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 GEMP55040 296 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 TMEM50BP56557 158 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 BPIFB3P59826 476 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 IL1RL1Q01638 556 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 NFATC2Q13469 925 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 FASTKD3Q14CZ7 662 aaKnown RBP3.41□□□□□ -1.86
CDR1-202ENST00000625883 MRGPRG-AS1Q2M3A8 158 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 MPPE1Q53F39 396 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 CCDC92Q53HC0 331 aaPredicted RBP3.41□□□□□ -1.86
CDR1-202ENST00000625883 FASTKD1Q53R41 847 aaKnown RBP3.41□□□□□ -1.86
CDR1-202ENST00000625883 OTUD3Q5T2D3 398 aaPredicted RBP3.41□□□□□ -1.86
CDR1-202ENST00000625883 ZNF730Q6ZMV8 503 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 ZSCAN30Q86W11 494 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 ZFAND4Q86XD8 727 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 MRPL43Q8N983 215 aaKnown RBP3.41□□□□□ -1.86
CDR1-202ENST00000625883 PRSS33Q8NF86 280 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 OR52B6Q8NGF0 335 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 OR6F1Q8NGZ6 308 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 MRPL24Q96A35 216 aaKnown RBP3.41□□□□□ -1.86
CDR1-202ENST00000625883 TMEM186Q96B77 213 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 RAB39BQ96DA2 213 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 AGAP4Q96P64 663 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 SYT11Q9BT88 431 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 FUNDC2Q9BWH2 189 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 DDX47Q9H0S4 455 aaKnown RBP3.41□□□□□ -1.86
CDR1-202ENST00000625883 ABCG4Q9H172 646 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 TRPV6Q9H1D0 765 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 UPF3AQ9H1J1 476 aaKnown RBP3.41□□□□□ -1.86
CDR1-202ENST00000625883 PLEKHA3Q9HB20 300 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 UBE2TQ9NPD8 197 aaPredicted RBP3.41□□□□□ -1.86
CDR1-202ENST00000625883 KCNN3Q9UGI6 736 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 DIMT1Q9UNQ2 313 aaKnown RBP3.41□□□□□ -1.86
CDR1-202ENST00000625883 MRPS2Q9Y399 296 aaKnown RBP3.41□□□□□ -1.86
CDR1-202ENST00000625883 NPC1L1Q9UHC9 1359 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 MYH15Q9Y2K3 1946 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 A0A0U1RRA0 63 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 IQCMA0A1B0GVH7 501 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 KPNA7A9QM74 516 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.41□□□□□ -1.86
CDR1-202ENST00000625883 INPP4BO15327 924 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 SNAP91O60641 907 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 SERPINF2P08697 491 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 PCP11498 1178 aaKnown RBP3.41□□□□□ -1.86
CDR1-202ENST00000625883 PKLRP30613 574 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 FCGR2BP31994 310 aaPredicted RBP3.41□□□□□ -1.86
CDR1-202ENST00000625883 FCGR2CP31995 323 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 RABIFP47224 123 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 ZFP36L2P47974 494 aaKnown RBP3.41□□□□□ -1.86
CDR1-202ENST00000625883 CCL11P51671 97 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 TKTL1P51854 596 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 CRYBA2P53672 197 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 RPL27P61353 136 aaKnown RBP3.41□□□□□ -1.86
CDR1-202ENST00000625883 ERVK-16P61578 105 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 IRX1P78414 480 aaPredicted RBP3.41□□□□□ -1.86
CDR1-202ENST00000625883 CCZ1BP86790 482 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 CCZ1P86791 482 aaPredicted RBP3.41□□□□□ -1.86
CDR1-202ENST00000625883 RBBP4Q09028 425 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 LY6DQ14210 128 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 EXOSC7Q15024 291 aaKnown RBP3.41□□□□□ -1.86
CDR1-202ENST00000625883 UPP1Q16831 310 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 KNOP1Q1ED39 458 aaKnown RBP3.41□□□□□ -1.86
CDR1-202ENST00000625883 C14orf177Q52M58 125 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 HERC4Q5GLZ8 1057 aaPredicted RBP3.41□□□□□ -1.86
CDR1-202ENST00000625883 DCAF12Q5T6F0 453 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 NEK5Q6P3R8 708 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 ZNF613Q6PF04 617 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 TRIM65Q6PJ69 517 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 MFSD7Q6UXD7 560 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 WDR88Q6ZMY6 472 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 MIER3Q7Z3K6 550 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 LRRTM1Q86UE6 522 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms