RNA–Protein interactions for RNA: ENST00000620632.4

TARDBP-223, Transcript of TAR DNA binding protein, human

TSL 3

Gene TARDBP, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-223	ENST00000620632	PAPD4	Q6PIY7	484 aa	Known RBP	10.11	□□□□□ -0.79
TARDBP-223	ENST00000620632	CYP20A1	Q6UW02	462 aa		10.11	□□□□□ -0.79
TARDBP-223	ENST00000620632	DGAT2L6	Q6ZPD8	337 aa		10.11	□□□□□ -0.79
TARDBP-223	ENST00000620632		Q6ZSR9	355 aa		10.11	□□□□□ -0.79
TARDBP-223	ENST00000620632	TRIM46	Q7Z4K8	759 aa		10.11	□□□□□ -0.79
TARDBP-223	ENST00000620632	OR4N5	Q8IXE1	308 aa		10.11	□□□□□ -0.79
TARDBP-223	ENST00000620632	ZNF595	Q8IYB9	648 aa		10.11	□□□□□ -0.79
TARDBP-223	ENST00000620632	LSM14A	Q8ND56	463 aa	Known RBP	10.11	□□□□□ -0.79
TARDBP-223	ENST00000620632	NFAM1	Q8NET5	270 aa	Predicted RBP	10.11	□□□□□ -0.79
TARDBP-223	ENST00000620632	C9orf43	Q8TAL5	461 aa	Predicted RBP	10.11	□□□□□ -0.79
TARDBP-223	ENST00000620632	MGARP	Q8TDB4	240 aa		10.11	□□□□□ -0.79
TARDBP-223	ENST00000620632	ADAMTS18	Q8TE60	1221 aa		10.11	□□□□□ -0.79
TARDBP-223	ENST00000620632	THOC3	Q96J01	351 aa	Known RBP	10.11	□□□□□ -0.79
TARDBP-223	ENST00000620632	SORT1	Q99523	831 aa		10.11	□□□□□ -0.79
TARDBP-223	ENST00000620632	SMAD5	Q99717	465 aa	Known RBP	10.11	□□□□□ -0.79
TARDBP-223	ENST00000620632	STMN4	Q9H169	189 aa	Predicted RBP	10.11	□□□□□ -0.79
TARDBP-223	ENST00000620632	SLC25A18	Q9H1K4	315 aa		10.11	□□□□□ -0.79
TARDBP-223	ENST00000620632	VIPAS39	Q9H9C1	493 aa		10.11	□□□□□ -0.79
TARDBP-223	ENST00000620632	RIC8B	Q9NVN3	520 aa		10.11	□□□□□ -0.79
TARDBP-223	ENST00000620632	GPR83	Q9NYM4	423 aa		10.11	□□□□□ -0.79
TARDBP-223	ENST00000620632	C19orf25	Q9UFG5	118 aa	Predicted RBP	10.11	□□□□□ -0.79
TARDBP-223	ENST00000620632	PHF11	Q9UIL8	331 aa		10.11	□□□□□ -0.79
TARDBP-223	ENST00000620632	ADAM29	Q9UKF5	820 aa		10.11	□□□□□ -0.79
TARDBP-223	ENST00000620632	PCDHGA9	Q9Y5G4	932 aa	Known RBP	10.11	□□□□□ -0.79
TARDBP-223	ENST00000620632	DNAJC15	Q9Y5T4	150 aa		10.11	□□□□□ -0.79
TARDBP-223	ENST00000620632	UQCRHL	A0A096LP55	91 aa		10.1	□□□□□ -0.79
TARDBP-223	ENST00000620632	SAGE2P	A6NJ88	616 aa		10.1	□□□□□ -0.79
TARDBP-223	ENST00000620632	MKRN2OS	H3BPM6	223 aa		10.1	□□□□□ -0.79
TARDBP-223	ENST00000620632	PGRMC2	O15173	223 aa		10.1	□□□□□ -0.79
TARDBP-223	ENST00000620632	CTNS	O60931	367 aa		10.1	□□□□□ -0.79
TARDBP-223	ENST00000620632	CRCP	O75575	148 aa		10.1	□□□□□ -0.79
TARDBP-223	ENST00000620632	SERPINE1	P05121	402 aa		10.1	□□□□□ -0.79
TARDBP-223	ENST00000620632	JUN	P05412	331 aa	Known RBP	10.1	□□□□□ -0.79
TARDBP-223	ENST00000620632	UQCRH	P07919	91 aa		10.1	□□□□□ -0.79
TARDBP-223	ENST00000620632	FGF4	P08620	206 aa		10.1	□□□□□ -0.79
TARDBP-223	ENST00000620632	NR2F6	P10588	404 aa		10.1	□□□□□ -0.79
TARDBP-223	ENST00000620632	SERPINB5	P36952	375 aa		10.1	□□□□□ -0.79
TARDBP-223	ENST00000620632	SLC18A1	P54219	525 aa		10.1	□□□□□ -0.79
TARDBP-223	ENST00000620632	SLC26A5	P58743	744 aa		10.1	□□□□□ -0.79
TARDBP-223	ENST00000620632	IGLV3-21	P80748	117 aa	Predicted RBP	10.1	□□□□□ -0.79
TARDBP-223	ENST00000620632	FOLH1	Q04609	750 aa		10.1	□□□□□ -0.79
TARDBP-223	ENST00000620632	ZNF33B	Q06732	778 aa		10.1	□□□□□ -0.79
TARDBP-223	ENST00000620632	KIAA0040	Q15053	153 aa		10.1	□□□□□ -0.79
TARDBP-223	ENST00000620632	BTBD16	Q32M84	506 aa		10.1	□□□□□ -0.79
TARDBP-223	ENST00000620632	LACTB2	Q53H82	288 aa	Predicted RBP	10.1	□□□□□ -0.79
TARDBP-223	ENST00000620632	CCNYL2	Q5T2Q4	361 aa		10.1	□□□□□ -0.79
TARDBP-223	ENST00000620632	B3GNTL1	Q67FW5	361 aa	Predicted RBP	10.1	□□□□□ -0.79
TARDBP-223	ENST00000620632	PLAG1	Q6DJT9	500 aa		10.1	□□□□□ -0.79
TARDBP-223	ENST00000620632	TCTN3	Q6NUS6	607 aa		10.1	□□□□□ -0.79
TARDBP-223	ENST00000620632	KIF2B	Q8N4N8	673 aa		10.1	□□□□□ -0.79
TARDBP-223	ENST00000620632	SIRT6	Q8N6T7	355 aa		10.1	□□□□□ -0.79
TARDBP-223	ENST00000620632	ZNF781	Q8N8C0	355 aa		10.1	□□□□□ -0.79
TARDBP-223	ENST00000620632	GBP7	Q8N8V2	638 aa	Predicted RBP	10.1	□□□□□ -0.79
TARDBP-223	ENST00000620632	DNAJB14	Q8TBM8	379 aa		10.1	□□□□□ -0.79
TARDBP-223	ENST00000620632	BRIX1	Q8TDN6	353 aa	Known RBP	10.1	□□□□□ -0.79
TARDBP-223	ENST00000620632	TWIST2	Q8WVJ9	160 aa		10.1	□□□□□ -0.79
TARDBP-223	ENST00000620632	TM4SF18	Q96CE8	201 aa		10.1	□□□□□ -0.79
TARDBP-223	ENST00000620632	ATP6V1G3	Q96LB4	118 aa		10.1	□□□□□ -0.79
TARDBP-223	ENST00000620632	NPAS2	Q99743	824 aa		10.1	□□□□□ -0.79
TARDBP-223	ENST00000620632	PAIP2	Q9BPZ3	127 aa	Known RBP	10.1	□□□□□ -0.79
TARDBP-223	ENST00000620632	TUBB6	Q9BUF5	446 aa		10.1	□□□□□ -0.79
TARDBP-223	ENST00000620632	EBPL	Q9BY08	206 aa		10.1	□□□□□ -0.79
TARDBP-223	ENST00000620632	LHPP	Q9H008	270 aa		10.1	□□□□□ -0.79
TARDBP-223	ENST00000620632	RPF2	Q9H7B2	306 aa	Known RBP	10.1	□□□□□ -0.79
TARDBP-223	ENST00000620632	LYAR	Q9NX58	379 aa	Known RBP	10.1	□□□□□ -0.79
TARDBP-223	ENST00000620632	AHSP	Q9NZD4	102 aa		10.1	□□□□□ -0.79
TARDBP-223	ENST00000620632	C5AR2	Q9P296	337 aa		10.1	□□□□□ -0.79
TARDBP-223	ENST00000620632	ZNF223	Q9UK11	482 aa	Predicted RBP	10.1	□□□□□ -0.79
TARDBP-223	ENST00000620632	MRPS33	Q9Y291	106 aa	Known RBP	10.1	□□□□□ -0.79
TARDBP-223	ENST00000620632	TRAF6	Q9Y4K3	522 aa		10.1	□□□□□ -0.79
TARDBP-223	ENST00000620632	CSAG2	Q9Y5P2	127 aa		10.1	□□□□□ -0.79
TARDBP-223	ENST00000620632	EML6	Q6ZMW3	1958 aa		10.1	□□□□□ -0.79
TARDBP-223	ENST00000620632	CLDN4	O14493	209 aa		10.09	□□□□□ -0.79
TARDBP-223	ENST00000620632	PIP5K1B	O14986	540 aa		10.09	□□□□□ -0.79
TARDBP-223	ENST00000620632	PCDH7	O60245	1069 aa		10.09	□□□□□ -0.79
TARDBP-223	ENST00000620632	MAN1A2	O60476	641 aa		10.09	□□□□□ -0.79
TARDBP-223	ENST00000620632	RSL1D1	O76021	490 aa	Known RBP	10.09	□□□□□ -0.79
TARDBP-223	ENST00000620632	MYO1D	O94832	1006 aa		10.09	□□□□□ -0.79
TARDBP-223	ENST00000620632	SERPINA7	P05543	415 aa		10.09	□□□□□ -0.79
TARDBP-223	ENST00000620632	LINC00032	P0C843	101 aa		10.09	□□□□□ -0.79
TARDBP-223	ENST00000620632	TIA1	P31483	386 aa	Known RBP eCLIP	10.09	□□□□□ -0.79	2e-7	■■■□□ 17.4
TARDBP-223	ENST00000620632	BUD31	P41223	144 aa	Predicted RBP	10.09	□□□□□ -0.79
TARDBP-223	ENST00000620632	ST13	P50502	369 aa	Known RBP	10.09	□□□□□ -0.79
TARDBP-223	ENST00000620632	GPR143	P51810	404 aa		10.09	□□□□□ -0.79
TARDBP-223	ENST00000620632	PGD	P52209	483 aa		10.09	□□□□□ -0.79
TARDBP-223	ENST00000620632	MAPK12	P53778	367 aa		10.09	□□□□□ -0.79
TARDBP-223	ENST00000620632	ABCE1	P61221	599 aa	Known RBP	10.09	□□□□□ -0.79
TARDBP-223	ENST00000620632	ACTN3	Q08043	901 aa	Predicted RBP	10.09	□□□□□ -0.79
TARDBP-223	ENST00000620632	BST1	Q10588	318 aa		10.09	□□□□□ -0.79
TARDBP-223	ENST00000620632	NFATC3	Q12968	1075 aa		10.09	□□□□□ -0.79
TARDBP-223	ENST00000620632	ZNF750	Q32MQ0	723 aa		10.09	□□□□□ -0.79
TARDBP-223	ENST00000620632	NDUFAF5	Q5TEU4	345 aa		10.09	□□□□□ -0.79
TARDBP-223	ENST00000620632	FCRLB	Q6BAA4	426 aa		10.09	□□□□□ -0.79
TARDBP-223	ENST00000620632	FAM180B	Q6P0A1	224 aa		10.09	□□□□□ -0.79
TARDBP-223	ENST00000620632	RNF165	Q6ZSG1	346 aa		10.09	□□□□□ -0.79
TARDBP-223	ENST00000620632	ASB18	Q6ZVZ8	466 aa		10.09	□□□□□ -0.79
TARDBP-223	ENST00000620632	PAGE2	Q7Z2X7	111 aa		10.09	□□□□□ -0.79
TARDBP-223	ENST00000620632	PTRH1	Q86Y79	214 aa	Known RBP	10.09	□□□□□ -0.79
TARDBP-223	ENST00000620632	KBTBD2	Q8IY47	623 aa		10.09	□□□□□ -0.79
TARDBP-223	ENST00000620632	CLYBL	Q8N0X4	340 aa		10.09	□□□□□ -0.79

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