RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 CEACAM20Q6UY09 585 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 MSANTD1Q6ZTZ1 278 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 YTHDF3Q7Z739 585 aaKnown RBP7.57□□□□□ -1.2
CPNE3-209ENST00000620393 MMP21Q8N119 569 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 FAM47BQ8NA70 645 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 VPS37AQ8NEZ2 397 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 OR51Q1Q8NH59 317 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 WDR36Q8NI36 951 aaKnown RBP7.57□□□□□ -1.2
CPNE3-209ENST00000620393 DNAJB14Q8TBM8 379 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 ADAMTS14Q8WXS8 1223 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 TANKQ92844 425 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 COL26A1Q96A83 441 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 VPS33AQ96AX1 596 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 PPCDCQ96CD2 204 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 CLIP3Q96DZ5 547 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 LRFN5Q96NI6 719 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 GBP5Q96PP8 586 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 OR52E6Q96RD3 313 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 CTRCQ99895 268 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 RTKNQ9BST9 563 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 DUSP26Q9BV47 211 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 ASPSCR1Q9BZE9 553 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 BHLHE41Q9C0J9 482 aaPredicted RBP7.57□□□□□ -1.2
CPNE3-209ENST00000620393 RPF2Q9H7B2 306 aaKnown RBP7.57□□□□□ -1.2
CPNE3-209ENST00000620393 ZNF304Q9HCX3 659 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 MIEF1Q9NQG6 463 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 SLC35C2Q9NQQ7 365 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 TXLNGQ9NUQ3 528 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 ATAD3AQ9NVI7 634 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 MAP10Q9P2G4 905 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 LEF1Q9UJU2 399 aaPredicted RBP7.57□□□□□ -1.2
CPNE3-209ENST00000620393 CDV3Q9UKY7 258 aaKnown RBP7.57□□□□□ -1.2
CPNE3-209ENST00000620393 PCDHGA3Q9Y5H0 932 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 MAU2Q9Y6X3 613 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 TP53BP1Q12888 1972 aaPredicted RBP7.57□□□□□ -1.2
CPNE3-209ENST00000620393 WDR87Q6ZQQ6 2873 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 LOC100996750A0A140TA64 210 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 A0A1W2PNU3 283 aaPredicted RBP7.56□□□□□ -1.2
CPNE3-209ENST00000620393 BLACEA4D250 179 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 GLOD5A6NK44 160 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 MEN1O00255 615 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 CLDN4O14493 209 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 AIM2O14862 343 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 ANGPT2O15123 496 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 HNRNPCL1O60812 293 aaKnown RBP7.56□□□□□ -1.2
CPNE3-209ENST00000620393 CTNSO60931 367 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 UNC5CO95185 931 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 NPPAP01160 153 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 JMJD7P0C870 316 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 NR2F6P10588 404 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 ZNF28P17035 718 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 ITIH1P19827 911 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 ITGAXP20702 1163 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 AGXTP21549 392 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 RORAP35398 523 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 ETV5P41161 510 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 TRPC1P48995 793 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 ALDH9A1P49189 494 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 RASSF2P50749 326 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 PCBP4P57723 403 aaKnown RBP7.56□□□□□ -1.2
CPNE3-209ENST00000620393 DCDP81605 110 aaKnown RBP7.56□□□□□ -1.2
CPNE3-209ENST00000620393 ABHD18Q0P651 414 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 LRRC74AQ0VAA2 488 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 ART3Q13508 389 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 MAPKAPK3Q16644 382 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 SYT16Q17RD7 645 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 RSPO4Q2I0M5 234 aaPredicted RBP7.56□□□□□ -1.2
CPNE3-209ENST00000620393 MPEG1Q2M385 716 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 MMEL1Q495T6 779 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 NKAIN1Q4KMZ8 207 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 PAGE3Q5JUK9 113 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 C1orf189Q5VU69 101 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 ZNF385CQ66K41 422 aaPredicted RBP7.56□□□□□ -1.2
CPNE3-209ENST00000620393 OR4F3Q6IEY1 312 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 ANKRD26P1Q6NSI1 321 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 SLC48A1Q6P1K1 146 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 TMPRSS7Q7RTY8 843 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 RETREG3Q86VR2 466 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 ZNF595Q8IYB9 648 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 SAMD14Q8IZD0 417 aaPredicted RBP7.56□□□□□ -1.2
CPNE3-209ENST00000620393 SHISA5Q8N114 240 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 GALNT15Q8N3T1 639 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 DPP10Q8N608 796 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 METTL27Q8N6F8 245 aaPredicted RBP7.56□□□□□ -1.2
CPNE3-209ENST00000620393 PCYOX1LQ8NBM8 494 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 OR4K14Q8NGD5 310 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 ADAMTS18Q8TE60 1221 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.56□□□□□ -1.2
CPNE3-209ENST00000620393 GTF2H4Q92759 462 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 TBC1D20Q96BZ9 403 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 PEX11GQ96HA9 241 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 ITCHQ96J02 903 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 ZNF681Q96N22 645 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 NPAS2Q99743 824 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 DDA1Q9BW61 102 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 YIPF2Q9BWQ6 316 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 KRTAP4-6Q9BYQ5 205 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 SPRY4Q9C004 299 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 B3GNT4Q9C0J1 378 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 RMND5AQ9H871 391 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms