RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 TJP3O95049 919 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 CGAP01215 116 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 TP53P04637 393 aaPredicted RBP4.18□□□□□ -1.74
SNCA-213ENST00000618500 FESP07332 822 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 CELA3AP09093 270 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 CCL3P10147 92 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 PTPN6P29350 595 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 GCKP35557 465 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 AP1S2P56377 157 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 STXBP1P61764 594 aaKnown RBP4.18□□□□□ -1.74
SNCA-213ENST00000618500 CDKL1Q00532 357 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 ILF2Q12905 390 aaKnown RBP4.18□□□□□ -1.74
SNCA-213ENST00000618500 RCAN2Q14206 197 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 PHKG1Q16816 387 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 CLEC12BQ2HXU8 276 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 MRNIPQ6NTE8 343 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 C2orf73Q8N5S3 287 aaPredicted RBP4.18□□□□□ -1.74
SNCA-213ENST00000618500 RFLNBQ8N5W9 214 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 C9orf106Q8NAJ2 232 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 OR10H5Q8NGA6 315 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 SLC35B2Q8TB61 432 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 ACTL9Q8TC94 416 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 PTPMT1Q8WUK0 201 aaPredicted RBP4.18□□□□□ -1.74
SNCA-213ENST00000618500 PROX1Q92786 737 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 FBXL8Q96CD0 374 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 ZBED6CLQ96FA7 236 aaPredicted RBP4.18□□□□□ -1.74
SNCA-213ENST00000618500 PERPQ96FX8 193 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 PDLIM2Q96JY6 352 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 SERINC2Q96SA4 455 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 UGT2B28Q9BY64 529 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 IL22Q9GZX6 179 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 ZNF696Q9H7X3 374 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 DHRS7Q9Y394 339 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 ZNF175Q9Y473 711 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 SNX8Q9Y5X2 465 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 A0A087X1B8 175 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 OR51F1A6NGY5 319 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 LINC01387J3KSC0 135 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 CYR61O00622 381 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 DLX3O60479 287 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 MYO1DO94832 1006 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 ZNF888P0CJ79 500 aaPredicted RBP4.18□□□□□ -1.74
SNCA-213ENST00000618500 RBP3P10745 1247 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 IL11P20809 199 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 PPP2R1BP30154 601 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 SERPINB1P30740 379 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 CCKARP32238 428 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 RFC3P40938 356 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 GPR85P60893 370 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 DHX9Q08211 1270 aaKnown RBP4.18□□□□□ -1.74
SNCA-213ENST00000618500 DUSP8Q13202 625 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 KLF1Q13351 362 aaPredicted RBP4.18□□□□□ -1.74
SNCA-213ENST00000618500 EFTUD2Q15029 972 aaKnown RBP eCLIP4.18□□□□□ -1.74
SNCA-213ENST00000618500 PDLIM3Q53GG5 364 aaPredicted RBP4.18□□□□□ -1.74
SNCA-213ENST00000618500 ACSBG2Q5FVE4 666 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 XKR6Q5GH73 641 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 UBAP2Q5T6F2 1119 aaKnown RBP4.18□□□□□ -1.74
SNCA-213ENST00000618500 SDCCAG8Q86SQ7 713 aaPredicted RBP4.18□□□□□ -1.74
SNCA-213ENST00000618500 LDB1Q86U70 411 aaPredicted RBP4.18□□□□□ -1.74
SNCA-213ENST00000618500 DTX2Q86UW9 622 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 KCT2Q8NC54 265 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 CFAP61Q8NHU2 1237 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 GABPB2Q8TAK5 448 aaPredicted RBP4.18□□□□□ -1.74
SNCA-213ENST00000618500 ATL1Q8WXF7 558 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 WDR34Q96EX3 536 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 TRMT61AQ96FX7 289 aaKnown RBP4.18□□□□□ -1.74
SNCA-213ENST00000618500 TRIB1Q96RU8 372 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 APOL2Q9BQE5 337 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 SLC39A3Q9BRY0 314 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 PACSIN1Q9BY11 444 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 PRTFDC1Q9NRG1 225 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 SAE1Q9UBE0 346 aaPredicted RBP4.18□□□□□ -1.74
SNCA-213ENST00000618500 PCDHA13Q9Y5I0 950 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 YLPM1P49750 1951 aaKnown RBP4.17□□□□□ -1.74
SNCA-213ENST00000618500 TGFBR3LH3BV60 316 aa4.17□□□□□ -1.74
SNCA-213ENST00000618500 H7BY64 318 aa4.17□□□□□ -1.74
SNCA-213ENST00000618500 EMC8O43402 210 aa4.17□□□□□ -1.74
SNCA-213ENST00000618500 ZBTB14O43829 449 aa4.17□□□□□ -1.74
SNCA-213ENST00000618500 LCMT2O60294 686 aaKnown RBP4.17□□□□□ -1.74
SNCA-213ENST00000618500 NDUFS3O75489 264 aa4.17□□□□□ -1.74
SNCA-213ENST00000618500 METTL18O95568 372 aa4.17□□□□□ -1.74
SNCA-213ENST00000618500 GYPCP04921 128 aa4.17□□□□□ -1.74
SNCA-213ENST00000618500 CYP4B1P13584 511 aa4.17□□□□□ -1.74
SNCA-213ENST00000618500 MAOAP21397 527 aa4.17□□□□□ -1.74
SNCA-213ENST00000618500 STIP1P31948 543 aaKnown RBP4.17□□□□□ -1.74
SNCA-213ENST00000618500 MAGEA6P43360 314 aa4.17□□□□□ -1.74
SNCA-213ENST00000618500 STT3AP46977 705 aa4.17□□□□□ -1.74
SNCA-213ENST00000618500 PRAMEP78395 509 aa4.17□□□□□ -1.74
SNCA-213ENST00000618500 CCZ1BP86790 482 aa4.17□□□□□ -1.74
SNCA-213ENST00000618500 CCZ1P86791 482 aaPredicted RBP4.17□□□□□ -1.74
SNCA-213ENST00000618500 CDK16Q00536 496 aa4.17□□□□□ -1.74
SNCA-213ENST00000618500 E2F2Q14209 437 aa4.17□□□□□ -1.74
SNCA-213ENST00000618500 KCNJ11Q14654 390 aa4.17□□□□□ -1.74
SNCA-213ENST00000618500 KLHL38Q2WGJ6 581 aa4.17□□□□□ -1.74
SNCA-213ENST00000618500 SLC30A6Q6NXT4 461 aa4.17□□□□□ -1.74
SNCA-213ENST00000618500 DARS2Q6PI48 645 aaKnown RBP4.17□□□□□ -1.74
SNCA-213ENST00000618500 SASS6Q6UVJ0 657 aa4.17□□□□□ -1.74
SNCA-213ENST00000618500 SEZ6L2Q6UXD5 910 aa4.17□□□□□ -1.74
SNCA-213ENST00000618500 PRAP1Q96NZ9 151 aa4.17□□□□□ -1.74
SNCA-213ENST00000618500 SLC6A15Q9H2J7 730 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms