RNA–Protein interactions for RNA: ENST00000616952.1

AP003900.1-202, humanhuman

TSL 3

Gene AP003900.1, Length 225 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003900.1-202ENST00000616952 HOMER3Q9NSC5 361 aa9.2□□□□□ -0.94
AP003900.1-202ENST00000616952 IKZF3Q9UKT9 509 aa9.2□□□□□ -0.94
AP003900.1-202ENST00000616952 RUVBL2Q9Y230 463 aaKnown RBP9.2□□□□□ -0.94
AP003900.1-202ENST00000616952 GOLGA6L4A6NEF3 574 aa9.19□□□□□ -0.94
AP003900.1-202ENST00000616952 GOLGA6L9A6NEM1 432 aa9.19□□□□□ -0.94
AP003900.1-202ENST00000616952 GFYI3L273 518 aa9.19□□□□□ -0.94
AP003900.1-202ENST00000616952 SMAD9O15198 467 aaKnown RBP9.19□□□□□ -0.94
AP003900.1-202ENST00000616952 ACSL3O95573 720 aa9.19□□□□□ -0.94
AP003900.1-202ENST00000616952 C1QAP02745 245 aa9.19□□□□□ -0.94
AP003900.1-202ENST00000616952 FESP07332 822 aa9.19□□□□□ -0.94
AP003900.1-202ENST00000616952 CD3EP07766 207 aa9.19□□□□□ -0.94
AP003900.1-202ENST00000616952 ZSCAN22P10073 491 aaPredicted RBP9.19□□□□□ -0.94
AP003900.1-202ENST00000616952 RBP3P10745 1247 aa9.19□□□□□ -0.94
AP003900.1-202ENST00000616952 CPN1P15169 458 aa9.19□□□□□ -0.94
AP003900.1-202ENST00000616952 CHMP24386 653 aa9.19□□□□□ -0.94
AP003900.1-202ENST00000616952 NR4A2P43354 598 aa9.19□□□□□ -0.94
AP003900.1-202ENST00000616952 NAGLUP54802 743 aa9.19□□□□□ -0.94
AP003900.1-202ENST00000616952 JAM2P57087 298 aa9.19□□□□□ -0.94
AP003900.1-202ENST00000616952 SIRPAP78324 504 aa9.19□□□□□ -0.94
AP003900.1-202ENST00000616952 SWI5Q1ZZU3 235 aa9.19□□□□□ -0.94
AP003900.1-202ENST00000616952 MEI1Q5TIA1 1274 aa9.19□□□□□ -0.94
AP003900.1-202ENST00000616952 ICE2Q659A1 982 aa9.19□□□□□ -0.94
AP003900.1-202ENST00000616952 PIANPQ8IYJ0 282 aa9.19□□□□□ -0.94
AP003900.1-202ENST00000616952 PQLC3Q8N755 202 aa9.19□□□□□ -0.94
AP003900.1-202ENST00000616952 KCT2Q8NC54 265 aa9.19□□□□□ -0.94
AP003900.1-202ENST00000616952 OXNAD1Q96HP4 312 aaPredicted RBP9.19□□□□□ -0.94
AP003900.1-202ENST00000616952 PDLIM2Q96JY6 352 aa9.19□□□□□ -0.94
AP003900.1-202ENST00000616952 ZNF670Q9BS34 389 aa9.19□□□□□ -0.94
AP003900.1-202ENST00000616952 DOHHQ9BU89 302 aa9.19□□□□□ -0.94
AP003900.1-202ENST00000616952 UBQLN3Q9H347 655 aa9.19□□□□□ -0.94
AP003900.1-202ENST00000616952 SRA1Q9HD15 236 aaKnown RBP9.19□□□□□ -0.94
AP003900.1-202ENST00000616952 SPATA7Q9P0W8 599 aa9.19□□□□□ -0.94
AP003900.1-202ENST00000616952 TAC3Q9UHF0 121 aa9.19□□□□□ -0.94
AP003900.1-202ENST00000616952 RNF112Q9ULX5 631 aa9.19□□□□□ -0.94
AP003900.1-202ENST00000616952 C5orf60A6NFR6 353 aa9.18□□□□□ -0.94
AP003900.1-202ENST00000616952 CHST10O43529 356 aa9.18□□□□□ -0.94
AP003900.1-202ENST00000616952 GPC4O75487 556 aa9.18□□□□□ -0.94
AP003900.1-202ENST00000616952 CCNDBP1O95273 360 aa9.18□□□□□ -0.94
AP003900.1-202ENST00000616952 C1orf105O95561 183 aa9.18□□□□□ -0.94
AP003900.1-202ENST00000616952 TGM6O95932 706 aa9.18□□□□□ -0.94
AP003900.1-202ENST00000616952 ACTL6AO96019 429 aa9.18□□□□□ -0.94
AP003900.1-202ENST00000616952 CGAP01215 116 aa9.18□□□□□ -0.94
AP003900.1-202ENST00000616952 FREM3P0C091 2139 aa9.18□□□□□ -0.94
AP003900.1-202ENST00000616952 OR56A5P0C7T3 313 aa9.18□□□□□ -0.94
AP003900.1-202ENST00000616952 CD8BP10966 210 aa9.18□□□□□ -0.94
AP003900.1-202ENST00000616952 PTNP21246 168 aa9.18□□□□□ -0.94
AP003900.1-202ENST00000616952 PPP2R1BP30154 601 aa9.18□□□□□ -0.94
AP003900.1-202ENST00000616952 CCR7P32248 378 aa9.18□□□□□ -0.94
AP003900.1-202ENST00000616952 KCNC1P48547 511 aa9.18□□□□□ -0.94
AP003900.1-202ENST00000616952 PRDX1Q06830 199 aaKnown RBP9.18□□□□□ -0.94
AP003900.1-202ENST00000616952 TSTA3Q13630 321 aaPredicted RBP9.18□□□□□ -0.94
AP003900.1-202ENST00000616952 RAB35Q15286 201 aa9.18□□□□□ -0.94
AP003900.1-202ENST00000616952 ZNF791Q3KP31 576 aaPredicted RBP9.18□□□□□ -0.94
AP003900.1-202ENST00000616952 EIPR1Q53HC9 387 aa9.18□□□□□ -0.94
AP003900.1-202ENST00000616952 COX20Q5RI15 118 aa9.18□□□□□ -0.94
AP003900.1-202ENST00000616952 PACS1Q6VY07 963 aa9.18□□□□□ -0.94
AP003900.1-202ENST00000616952 GABPB2Q8TAK5 448 aaPredicted RBP9.18□□□□□ -0.94
AP003900.1-202ENST00000616952 ASZ1Q8WWH4 475 aa9.18□□□□□ -0.94
AP003900.1-202ENST00000616952 ZNF845Q96IR2 970 aaPredicted RBP9.18□□□□□ -0.94
AP003900.1-202ENST00000616952 PIMREGQ9BSJ6 248 aa9.18□□□□□ -0.94
AP003900.1-202ENST00000616952 FSD1LQ9BXM9 530 aa9.18□□□□□ -0.94
AP003900.1-202ENST00000616952 TRIM2Q9C040 744 aa9.18□□□□□ -0.94
AP003900.1-202ENST00000616952 SLITRK2Q9H156 845 aa9.18□□□□□ -0.94
AP003900.1-202ENST00000616952 GANQ9H2C0 597 aa9.18□□□□□ -0.94
AP003900.1-202ENST00000616952 PNO1Q9NRX1 252 aaKnown RBP9.18□□□□□ -0.94
AP003900.1-202ENST00000616952 SLC22A7Q9Y694 548 aa9.18□□□□□ -0.94
AP003900.1-202ENST00000616952 CADP27708 2225 aa9.17□□□□□ -0.94
AP003900.1-202ENST00000616952 DYNC2H1Q8NCM8 4307 aaKnown RBP9.17□□□□□ -0.94
AP003900.1-202ENST00000616952 COL7A1Q02388 2944 aa9.17□□□□□ -0.94
AP003900.1-202ENST00000616952 PABPN1LA6NDY0 278 aaKnown RBP9.17□□□□□ -0.94
AP003900.1-202ENST00000616952 GALR3O60755 368 aaPredicted RBP9.17□□□□□ -0.94
AP003900.1-202ENST00000616952 AVILO75366 819 aa9.17□□□□□ -0.94
AP003900.1-202ENST00000616952 TRIM3O75382 744 aaPredicted RBP9.17□□□□□ -0.94
AP003900.1-202ENST00000616952 STK10O94804 968 aaKnown RBP9.17□□□□□ -0.94
AP003900.1-202ENST00000616952 LRATO95237 230 aa9.17□□□□□ -0.94
AP003900.1-202ENST00000616952 GHRHP01286 108 aa9.17□□□□□ -0.94
AP003900.1-202ENST00000616952 ERGP11308 486 aa9.17□□□□□ -0.94
AP003900.1-202ENST00000616952 ZNF23P17027 643 aa9.17□□□□□ -0.94
AP003900.1-202ENST00000616952 CD68P34810 354 aaPredicted RBP9.17□□□□□ -0.94
AP003900.1-202ENST00000616952 ARHGAP25P42331 645 aa9.17□□□□□ -0.94
AP003900.1-202ENST00000616952 KIR2DL2P43627 348 aaPredicted RBP9.17□□□□□ -0.94
AP003900.1-202ENST00000616952 SRYQ05066 204 aa9.17□□□□□ -0.94
AP003900.1-202ENST00000616952 KIF5AQ12840 1032 aa9.17□□□□□ -0.94
AP003900.1-202ENST00000616952 ITIH4Q14624 930 aa9.17□□□□□ -0.94
AP003900.1-202ENST00000616952 HERC3Q15034 1050 aa9.17□□□□□ -0.94
AP003900.1-202ENST00000616952 TOMM20Q15388 145 aa9.17□□□□□ -0.94
AP003900.1-202ENST00000616952 EXOC3L2Q2M3D2 409 aa9.17□□□□□ -0.94
AP003900.1-202ENST00000616952 TEX44Q53QW1 395 aa9.17□□□□□ -0.94
AP003900.1-202ENST00000616952 NCMAPQ5T1S8 102 aa9.17□□□□□ -0.94
AP003900.1-202ENST00000616952 AGAP6Q5VW22 663 aa9.17□□□□□ -0.94
AP003900.1-202ENST00000616952 OR2A2Q6IF42 318 aa9.17□□□□□ -0.94
AP003900.1-202ENST00000616952 DENND5AQ6IQ26 1287 aa9.17□□□□□ -0.94
AP003900.1-202ENST00000616952 ALKBH2Q6NS38 261 aa9.17□□□□□ -0.94
AP003900.1-202ENST00000616952 KIAA1328Q86T90 577 aa9.17□□□□□ -0.94
AP003900.1-202ENST00000616952 SVOPLQ8N434 492 aa9.17□□□□□ -0.94
AP003900.1-202ENST00000616952 ZNF610Q8N9Z0 462 aa9.17□□□□□ -0.94
AP003900.1-202ENST00000616952 CAMKVQ8NCB2 501 aa9.17□□□□□ -0.94
AP003900.1-202ENST00000616952 SMPDL3AQ92484 453 aa9.17□□□□□ -0.94
AP003900.1-202ENST00000616952 ALKBH8Q96BT7 664 aaKnown RBP9.17□□□□□ -0.94
AP003900.1-202ENST00000616952 AGPAT1Q99943 283 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms