RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 RAP2BP61225 183 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 CDK6Q00534 326 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 MS4A2Q01362 244 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 CDC20Q12834 499 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 PEA15Q15121 130 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 GXYLT1Q4G148 440 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 PXDC1Q5TGL8 231 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 CELF5Q8N6W0 485 aaKnown RBP6.61□□□□□ -1.35
CLCN3-211ENST00000613795 ZNF676Q8N7Q3 588 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 TCEANCQ8N8B7 351 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 CPNE2Q96FN4 548 aaPredicted RBP6.61□□□□□ -1.35
CLCN3-211ENST00000613795 BCO2Q9BYV7 579 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 PRRG4Q9BZD6 226 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 ZBTB20Q9HC78 741 aaPredicted RBP6.61□□□□□ -1.35
CLCN3-211ENST00000613795 EMC7Q9NPA0 242 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 DZANK1Q9NVP4 752 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 P2RX2Q9UBL9 471 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 ZFR2Q9UPR6 939 aaKnown RBP6.61□□□□□ -1.35
CLCN3-211ENST00000613795 MATN4O95460 622 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 LATS1O95835 1130 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 EPOP01588 193 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 CDK1P06493 297 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 SBK2P0C263 348 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 VIPR1P32241 457 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 SUOXP51687 545 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 TAS2R50P59544 299 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 MRPS10P82664 201 aaKnown RBP6.61□□□□□ -1.35
CLCN3-211ENST00000613795 NFKB2Q00653 900 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 GALNT1Q10472 559 aaPredicted RBP6.61□□□□□ -1.35
CLCN3-211ENST00000613795 PPP1R8Q12972 351 aaKnown RBP6.61□□□□□ -1.35
CLCN3-211ENST00000613795 TMEM69Q5SWH9 247 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 CORO6Q6QEF8 472 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 CRTC1Q6UUV9 634 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 LRP10Q7Z4F1 713 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 KCNJ9Q92806 393 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 TREX2Q9BQ50 279 aaPredicted RBP6.61□□□□□ -1.35
CLCN3-211ENST00000613795 SLC35A5Q9BS91 424 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 DERL2Q9GZP9 239 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 ERVMER34-1Q9H9K5 563 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 ELOVL2Q9NXB9 296 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 KLHL9Q9P2J3 617 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 ZNF541Q9H0D2 1346 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 A0A1W2PQ09 198 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 hCG_1807616A0A1W2PRN6 198 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 A8MU76 341 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 ARPC5O15511 151 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 ALDOBP05062 364 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 EPHX1P07099 455 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 SMIM18P0DKX4 95 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 G6PDP11413 515 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 TPT1P13693 172 aaKnown RBP6.61□□□□□ -1.35
CLCN3-211ENST00000613795 HRH2P25021 359 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 IL12BP29460 328 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 CRISP1P54107 249 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 ACTC1P68032 377 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 ACTA1P68133 377 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 SLC25A11Q02978 314 aaKnown RBP6.61□□□□□ -1.35
CLCN3-211ENST00000613795 ALKBH2Q6NS38 261 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 RFPL4BQ6ZWI9 263 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 CPNE8Q86YQ8 564 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 HS3ST5Q8IZT8 346 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 GLIS1Q8NBF1 620 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 KREMEN2Q8NCW0 462 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 KIAA1143Q96AT1 154 aaPredicted RBP6.61□□□□□ -1.35
CLCN3-211ENST00000613795 GAL3ST1Q99999 423 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 EBPLQ9BY08 206 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 SLC6A16Q9GZN6 736 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 DNTTIP1Q9H147 329 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 ABCG4Q9H172 646 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 AIG1Q9NVV5 245 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 MOCS1Q9NZB8 636 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 SLC17A6Q9P2U8 582 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 A0A1W2PRB8 838 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 TUBAL3A6NHL2 446 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 SLC43A1O75387 559 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 PFKLP17858 780 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 TUBG1P23258 451 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 ETV4P43268 484 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 LUMP51884 338 aaPredicted RBP6.61□□□□□ -1.35
CLCN3-211ENST00000613795 PDX1P52945 283 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 DSC2Q02487 901 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 FPGSQ05932 587 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 TBCEQ15813 527 aaPredicted RBP6.61□□□□□ -1.35
CLCN3-211ENST00000613795 BAK1Q16611 211 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 LCN9Q8WX39 176 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 FCRL1Q96LA6 429 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 FBXL18Q96ME1 805 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 OR2M4Q96R27 311 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 TBX5Q99593 518 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 MRI1Q9BV20 369 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 MFFQ9GZY8 342 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 SMOC2Q9H3U7 446 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 MRPS30Q9NP92 439 aaKnown RBP6.61□□□□□ -1.35
CLCN3-211ENST00000613795 SDHAF3Q9NRP4 125 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 LOC285095A0A1B0GVY8 99 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 A0A1W2PPL8 197 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 ELOA3DA6NLF2 546 aaPredicted RBP6.61□□□□□ -1.35
CLCN3-211ENST00000613795 EFCAB7A8K855 629 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 J3QLW9 94 aa6.61□□□□□ -1.35
CLCN3-211ENST00000613795 SLC16A5O15375 505 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms