RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 TRPC1P48995 793 aa15.85■□□□□ 0.13
CSNK1E-215ENST00000612795 IL2P60568 153 aa15.85■□□□□ 0.13
CSNK1E-215ENST00000612795 PPP2R2BQ00005 443 aa15.85■□□□□ 0.13
CSNK1E-215ENST00000612795 SORDQ00796 357 aa15.85■□□□□ 0.13
CSNK1E-215ENST00000612795 TIAL1Q01085 375 aaKnown RBP eCLIP15.85■□□□□ 0.13
CSNK1E-215ENST00000612795 GPS1Q13098 491 aa15.85■□□□□ 0.13
CSNK1E-215ENST00000612795 PDAP1Q13442 181 aaKnown RBP15.85■□□□□ 0.13
CSNK1E-215ENST00000612795 RCN2Q14257 317 aa15.85■□□□□ 0.13
CSNK1E-215ENST00000612795 ANKRD22Q5VYY1 191 aa15.85■□□□□ 0.13
CSNK1E-215ENST00000612795 SLC22A10Q63ZE4 541 aa15.85■□□□□ 0.13
CSNK1E-215ENST00000612795 KLHDC8AQ8IYD2 350 aa15.85■□□□□ 0.13
CSNK1E-215ENST00000612795 SLC2A12Q8TD20 617 aa15.85■□□□□ 0.13
CSNK1E-215ENST00000612795 PTPMT1Q8WUK0 201 aaPredicted RBP15.85■□□□□ 0.13
CSNK1E-215ENST00000612795 JSRP1Q96MG2 331 aaPredicted RBP15.85■□□□□ 0.13
CSNK1E-215ENST00000612795 RUNDC3BQ96NL0 473 aa15.85■□□□□ 0.13
CSNK1E-215ENST00000612795 CSF3RQ99062 836 aa15.85■□□□□ 0.13
CSNK1E-215ENST00000612795 ALOXE3Q9BYJ1 711 aa15.85■□□□□ 0.13
CSNK1E-215ENST00000612795 COPS7BQ9H9Q2 264 aaPredicted RBP15.85■□□□□ 0.13
CSNK1E-215ENST00000612795 XAB2Q9HCS7 855 aaKnown RBP15.85■□□□□ 0.13
CSNK1E-215ENST00000612795 ZFP64Q9NPA5 681 aa15.85■□□□□ 0.13
CSNK1E-215ENST00000612795 HOMER3Q9NSC5 361 aa15.85■□□□□ 0.13
CSNK1E-215ENST00000612795 KCNE2Q9Y6J6 123 aa15.85■□□□□ 0.13
CSNK1E-215ENST00000612795 HIVEP2P31629 2446 aa15.84■□□□□ 0.13
CSNK1E-215ENST00000612795 AHRRA9YTQ3 701 aa15.84■□□□□ 0.13
CSNK1E-215ENST00000612795 EPPINO95925 133 aa15.84■□□□□ 0.13
CSNK1E-215ENST00000612795 ENO2P09104 434 aaPredicted RBP15.84■□□□□ 0.13
CSNK1E-215ENST00000612795 PTMSP20962 102 aa15.84■□□□□ 0.13
CSNK1E-215ENST00000612795 HNRNPH1P31943 449 aaKnown RBP15.84■□□□□ 0.13
CSNK1E-215ENST00000612795 CEACAM8P31997 349 aaPredicted RBP15.84■□□□□ 0.13
CSNK1E-215ENST00000612795 TIMP3P35625 211 aa15.84■□□□□ 0.13
CSNK1E-215ENST00000612795 MAGEA6P43360 314 aa15.84■□□□□ 0.13
CSNK1E-215ENST00000612795 ZNF136P52737 540 aa15.84■□□□□ 0.13
CSNK1E-215ENST00000612795 CDKN2DP55273 166 aa15.84■□□□□ 0.13
CSNK1E-215ENST00000612795 TBL3Q12788 808 aaKnown RBP15.84■□□□□ 0.13
CSNK1E-215ENST00000612795 ASPHQ12797 758 aa15.84■□□□□ 0.13
CSNK1E-215ENST00000612795 RBM20Q5T481 1227 aaKnown RBP15.84■□□□□ 0.13
CSNK1E-215ENST00000612795 TRIM40Q6P9F5 258 aa15.84■□□□□ 0.13
CSNK1E-215ENST00000612795 RNF10Q8N5U6 811 aaKnown RBP15.84■□□□□ 0.13
CSNK1E-215ENST00000612795 TTLQ8NG68 377 aa15.84■□□□□ 0.13
CSNK1E-215ENST00000612795 GABPB2Q8TAK5 448 aaPredicted RBP15.84■□□□□ 0.13
CSNK1E-215ENST00000612795 SLC22A8Q8TCC7 542 aa15.84■□□□□ 0.13
CSNK1E-215ENST00000612795 MAIP1Q8WWC4 291 aa15.84■□□□□ 0.13
CSNK1E-215ENST00000612795 KIAA1191Q96A73 305 aa15.84■□□□□ 0.13
CSNK1E-215ENST00000612795 MS4A6EQ96DS6 147 aa15.84■□□□□ 0.13
CSNK1E-215ENST00000612795 SERPINB12Q96P63 405 aa15.84■□□□□ 0.13
CSNK1E-215ENST00000612795 BAG1Q99933 345 aaPredicted RBP15.84■□□□□ 0.13
CSNK1E-215ENST00000612795 ACKR4Q9NPB9 350 aa15.84■□□□□ 0.13
CSNK1E-215ENST00000612795 VTI1BQ9UEU0 232 aa15.84■□□□□ 0.13
CSNK1E-215ENST00000612795 SLC22A14Q9Y267 594 aa15.84■□□□□ 0.13
CSNK1E-215ENST00000612795 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.83■□□□□ 0.12
CSNK1E-215ENST00000612795 KDM4EB2RXH2 506 aaPredicted RBP15.83■□□□□ 0.12
CSNK1E-215ENST00000612795 CTNSO60931 367 aa15.83■□□□□ 0.12
CSNK1E-215ENST00000612795 HRGP04196 525 aa15.83■□□□□ 0.12
CSNK1E-215ENST00000612795 CERS1P27544 350 aa15.83■□□□□ 0.12
CSNK1E-215ENST00000612795 PLA2G16P53816 162 aa15.83■□□□□ 0.12
CSNK1E-215ENST00000612795 LIM2P55344 173 aa15.83■□□□□ 0.12
CSNK1E-215ENST00000612795 EFTUD2Q15029 972 aaKnown RBP eCLIP15.83■□□□□ 0.125e-18■■■□□ 18.3
CSNK1E-215ENST00000612795 MPEG1Q2M385 716 aa15.83■□□□□ 0.12
CSNK1E-215ENST00000612795 LRRC25Q8N386 305 aaPredicted RBP15.83■□□□□ 0.12
CSNK1E-215ENST00000612795 C2CD4AQ8NCU7 369 aaPredicted RBP15.83■□□□□ 0.12
CSNK1E-215ENST00000612795 SIMC1Q8NDZ2 872 aa15.83■□□□□ 0.12
CSNK1E-215ENST00000612795 FAM13CQ8NE31 585 aa15.83■□□□□ 0.12
CSNK1E-215ENST00000612795 QPCTLQ9NXS2 382 aa15.83■□□□□ 0.12
CSNK1E-215ENST00000612795 DAPP1Q9UN19 280 aa15.83■□□□□ 0.12
CSNK1E-215ENST00000612795 LRIT2A6NDA9 550 aa15.82■□□□□ 0.12
CSNK1E-215ENST00000612795 LRRC3CA6NJW4 275 aa15.82■□□□□ 0.12
CSNK1E-215ENST00000612795 CES2O00748 559 aa15.82■□□□□ 0.12
CSNK1E-215ENST00000612795 SMAD7O15105 426 aaKnown RBP15.82■□□□□ 0.12
CSNK1E-215ENST00000612795 H2AFYO75367 372 aaKnown RBP15.82■□□□□ 0.12
CSNK1E-215ENST00000612795 FGGP02679 453 aa15.82■□□□□ 0.12
CSNK1E-215ENST00000612795 GDF1P27539 372 aa15.82■□□□□ 0.12
CSNK1E-215ENST00000612795 HPDP32754 393 aaPredicted RBP15.82■□□□□ 0.12
CSNK1E-215ENST00000612795 MTTPP55157 894 aa15.82■□□□□ 0.12
CSNK1E-215ENST00000612795 DUSP8Q13202 625 aa15.82■□□□□ 0.12
CSNK1E-215ENST00000612795 SERTAD2Q14140 314 aa15.82■□□□□ 0.12
CSNK1E-215ENST00000612795 SF3B4Q15427 424 aaKnown RBP eCLIP15.82■□□□□ 0.12
CSNK1E-215ENST00000612795 POMZP3Q6PJE2 187 aa15.82■□□□□ 0.12
CSNK1E-215ENST00000612795 TMIGD1Q6UXZ0 262 aa15.82■□□□□ 0.12
CSNK1E-215ENST00000612795 CXorf67Q86X51 503 aaPredicted RBP15.82■□□□□ 0.12
CSNK1E-215ENST00000612795 PM20D2Q8IYS1 436 aa15.82■□□□□ 0.12
CSNK1E-215ENST00000612795 CIARTQ8N365 385 aaPredicted RBP15.82■□□□□ 0.12
CSNK1E-215ENST00000612795 OR2L5Q8NG80 312 aa15.82■□□□□ 0.12
CSNK1E-215ENST00000612795 PAQR8Q8TEZ7 354 aa15.82■□□□□ 0.12
CSNK1E-215ENST00000612795 ZNF592Q92610 1267 aa15.82■□□□□ 0.12
CSNK1E-215ENST00000612795 SPACA9Q96E40 222 aaPredicted RBP15.82■□□□□ 0.12
CSNK1E-215ENST00000612795 Q96MF0 132 aa15.82■□□□□ 0.12
CSNK1E-215ENST00000612795 SERINC2Q96SA4 455 aa15.82■□□□□ 0.12
CSNK1E-215ENST00000612795 EPB41L4BQ9H329 900 aa15.82■□□□□ 0.12
CSNK1E-215ENST00000612795 INAFM1C9JVW0 142 aa15.81■□□□□ 0.12
CSNK1E-215ENST00000612795 CYR61O00622 381 aa15.81■□□□□ 0.12
CSNK1E-215ENST00000612795 SMPD2O60906 423 aa15.81■□□□□ 0.12
CSNK1E-215ENST00000612795 LDB3O75112 727 aa15.81■□□□□ 0.12
CSNK1E-215ENST00000612795 COX7A2P14406 83 aa15.81■□□□□ 0.12
CSNK1E-215ENST00000612795 GSTM2P28161 218 aa15.81■□□□□ 0.12
CSNK1E-215ENST00000612795 AGFG1P52594 562 aaKnown RBP15.81■□□□□ 0.12
CSNK1E-215ENST00000612795 CRYZQ08257 329 aaKnown RBP15.81■□□□□ 0.12
CSNK1E-215ENST00000612795 CHD3Q12873 2000 aaKnown RBP15.81■□□□□ 0.12
CSNK1E-215ENST00000612795 SLBPQ14493 270 aaKnown RBP eCLIP15.81■□□□□ 0.12
CSNK1E-215ENST00000612795 ZNF791Q3KP31 576 aaPredicted RBP15.81■□□□□ 0.12
CSNK1E-215ENST00000612795 PIGGQ5H8A4 983 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms