RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 PSMC3IPQ9P2W1 217 aaPredicted RBP17.96■□□□□ 0.47
SGMS1-208ENST00000608287 FETUBQ9UGM5 382 aa17.96■□□□□ 0.47
SGMS1-208ENST00000608287 SH3BGRLO75368 114 aa17.95■□□□□ 0.46
SGMS1-208ENST00000608287 ZWINTO95229 277 aa17.95■□□□□ 0.46
SGMS1-208ENST00000608287 TGFB1P01137 390 aa17.95■□□□□ 0.46
SGMS1-208ENST00000608287 ITGAMP11215 1152 aa17.95■□□□□ 0.46
SGMS1-208ENST00000608287 CD46P15529 392 aa17.95■□□□□ 0.46
SGMS1-208ENST00000608287 SERPINB1P30740 379 aa17.95■□□□□ 0.46
SGMS1-208ENST00000608287 ARL1P40616 181 aaPredicted RBP17.95■□□□□ 0.46
SGMS1-208ENST00000608287 OR4D2P58180 307 aa17.95■□□□□ 0.46
SGMS1-208ENST00000608287 BTG2P78543 158 aa17.95■□□□□ 0.46
SGMS1-208ENST00000608287 DDX39BQ13838 428 aaKnown RBP17.95■□□□□ 0.46
SGMS1-208ENST00000608287 RUNX2Q13950 521 aa17.95■□□□□ 0.46
SGMS1-208ENST00000608287 BTBD16Q32M84 506 aa17.95■□□□□ 0.46
SGMS1-208ENST00000608287 LIPJQ5W064 366 aa17.95■□□□□ 0.46
SGMS1-208ENST00000608287 METTL2BQ6P1Q9 378 aaKnown RBP17.95■□□□□ 0.46
SGMS1-208ENST00000608287 ABHD17CQ6PCB6 329 aa17.95■□□□□ 0.46
SGMS1-208ENST00000608287 ZNF354BQ96LW1 612 aa17.95■□□□□ 0.46
SGMS1-208ENST00000608287 QRFPRQ96P65 431 aa17.95■□□□□ 0.46
SGMS1-208ENST00000608287 SERINC2Q96SA4 455 aa17.95■□□□□ 0.46
SGMS1-208ENST00000608287 MS4A8Q9BY19 250 aa17.95■□□□□ 0.46
SGMS1-208ENST00000608287 TBK1Q9UHD2 729 aa17.95■□□□□ 0.46
SGMS1-208ENST00000608287 INTS1Q8N201 2190 aaKnown RBP17.94■□□□□ 0.46
SGMS1-208ENST00000608287 ASPDHA6ND91 283 aa17.94■□□□□ 0.46
SGMS1-208ENST00000608287 NPIPA5E9PKD4 350 aa17.94■□□□□ 0.46
SGMS1-208ENST00000608287 STX16-NPEPL1H3BU86 382 aa17.94■□□□□ 0.46
SGMS1-208ENST00000608287 STX16O14662 325 aa17.94■□□□□ 0.46
SGMS1-208ENST00000608287 MAOAP21397 527 aa17.94■□□□□ 0.46
SGMS1-208ENST00000608287 CERS1P27544 350 aa17.94■□□□□ 0.46
SGMS1-208ENST00000608287 MTTPP55157 894 aa17.94■□□□□ 0.46
SGMS1-208ENST00000608287 SRSF11Q05519 484 aaKnown RBP17.94■□□□□ 0.46
SGMS1-208ENST00000608287 PLAG1Q6DJT9 500 aa17.94■□□□□ 0.46
SGMS1-208ENST00000608287 TMEM211Q6ICI0 200 aa17.94■□□□□ 0.46
SGMS1-208ENST00000608287 PAPD4Q6PIY7 484 aaKnown RBP17.94■□□□□ 0.46
SGMS1-208ENST00000608287 QSOX2Q6ZRP7 698 aa17.94■□□□□ 0.46
SGMS1-208ENST00000608287 CHSY3Q70JA7 882 aa17.94■□□□□ 0.46
SGMS1-208ENST00000608287 CYP4X1Q8N118 509 aa17.94■□□□□ 0.46
SGMS1-208ENST00000608287 SRFBP1Q8NEF9 429 aaKnown RBP17.94■□□□□ 0.46
SGMS1-208ENST00000608287 ATP6V1E2Q96A05 226 aa17.94■□□□□ 0.46
SGMS1-208ENST00000608287 KCNC2Q96PR1 638 aa17.94■□□□□ 0.46
SGMS1-208ENST00000608287 DMRTA2Q96SC8 542 aa17.94■□□□□ 0.46
SGMS1-208ENST00000608287 LPAR4Q99677 370 aa17.94■□□□□ 0.46
SGMS1-208ENST00000608287 ANKZF1Q9H8Y5 726 aa17.94■□□□□ 0.46
SGMS1-208ENST00000608287 PRDM9Q9NQV7 894 aa17.94■□□□□ 0.46
SGMS1-208ENST00000608287 ADGRE2Q9UHX3 823 aa17.94■□□□□ 0.46
SGMS1-208ENST00000608287 NPIPA1Q9UND3 350 aa17.94■□□□□ 0.46
SGMS1-208ENST00000608287 PCDHGA11Q9Y5H2 935 aa17.94■□□□□ 0.46
SGMS1-208ENST00000608287 GOLGA8RI6L899 631 aa17.93■□□□□ 0.46
SGMS1-208ENST00000608287 CDK2AP1O14519 115 aa17.93■□□□□ 0.46
SGMS1-208ENST00000608287 ASNA1O43681 348 aa17.93■□□□□ 0.46
SGMS1-208ENST00000608287 ZNF500O60304 480 aaPredicted RBP17.93■□□□□ 0.46
SGMS1-208ENST00000608287 UGDHO60701 494 aa17.93■□□□□ 0.46
SGMS1-208ENST00000608287 SHBGP04278 402 aa17.93■□□□□ 0.46
SGMS1-208ENST00000608287 RAB38P57729 211 aa17.93■□□□□ 0.46
SGMS1-208ENST00000608287 EXT1Q16394 746 aa17.93■□□□□ 0.46
SGMS1-208ENST00000608287 CPSF6Q16630 551 aaKnown RBP eCLIP17.93■□□□□ 0.46
SGMS1-208ENST00000608287 TMEM35AQ53FP2 167 aa17.93■□□□□ 0.46
SGMS1-208ENST00000608287 RNF175Q8N4F7 328 aa17.93■□□□□ 0.46
SGMS1-208ENST00000608287 ARMC2Q8NEN0 867 aa17.93■□□□□ 0.46
SGMS1-208ENST00000608287 HUS1BQ8NHY5 278 aa17.93■□□□□ 0.46
SGMS1-208ENST00000608287 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.93■□□□□ 0.461e-10■■■■■ 47.2
SGMS1-208ENST00000608287 CMTM7Q96FZ5 175 aa17.93■□□□□ 0.46
SGMS1-208ENST00000608287 MTERF1Q99551 399 aaKnown RBP17.93■□□□□ 0.46
SGMS1-208ENST00000608287 UTP23Q9BRU9 249 aaKnown RBP17.93■□□□□ 0.46
SGMS1-208ENST00000608287 ROGDIQ9GZN7 287 aa17.93■□□□□ 0.46
SGMS1-208ENST00000608287 OR51B5Q9H339 312 aa17.93■□□□□ 0.46
SGMS1-208ENST00000608287 NOL11Q9H8H0 719 aaKnown RBP17.93■□□□□ 0.46
SGMS1-208ENST00000608287 PRDM7Q9NQW5 492 aa17.93■□□□□ 0.46
SGMS1-208ENST00000608287 PCTPQ9UKL6 214 aa17.93■□□□□ 0.46
SGMS1-208ENST00000608287 RNF11Q9Y3C5 154 aa17.93■□□□□ 0.46
SGMS1-208ENST00000608287 PRRC2AP48634 2157 aaKnown RBP17.93■□□□□ 0.46
SGMS1-208ENST00000608287 ACANP16112 2415 aa17.92■□□□□ 0.46
SGMS1-208ENST00000608287 A8MUI8 341 aa17.92■□□□□ 0.46
SGMS1-208ENST00000608287 SAP18O00422 153 aaKnown RBP17.92■□□□□ 0.46
SGMS1-208ENST00000608287 RTCAO00442 366 aaKnown RBP17.92■□□□□ 0.46
SGMS1-208ENST00000608287 OR7A17O14581 309 aa17.92■□□□□ 0.46
SGMS1-208ENST00000608287 CLDN9O95484 217 aa17.92■□□□□ 0.46
SGMS1-208ENST00000608287 CHRNB4P30926 498 aa17.92■□□□□ 0.46
SGMS1-208ENST00000608287 PIK3CBP42338 1070 aa17.92■□□□□ 0.46
SGMS1-208ENST00000608287 CCNG1P51959 295 aa17.92■□□□□ 0.46
SGMS1-208ENST00000608287 LIM2P55344 173 aa17.92■□□□□ 0.46
SGMS1-208ENST00000608287 PHEXP78562 749 aa17.92■□□□□ 0.46
SGMS1-208ENST00000608287 KHDRBS2Q5VWX1 349 aaKnown RBP17.92■□□□□ 0.46
SGMS1-208ENST00000608287 UBE3DQ7Z6J8 389 aa17.92■□□□□ 0.46
SGMS1-208ENST00000608287 BIVMQ86UB2 503 aa17.92■□□□□ 0.46
SGMS1-208ENST00000608287 DOLPP1Q86YN1 238 aa17.92■□□□□ 0.46
SGMS1-208ENST00000608287 DMRTC2Q8IXT2 367 aaPredicted RBP17.92■□□□□ 0.46
SGMS1-208ENST00000608287 CNPY4Q8N129 248 aa17.92■□□□□ 0.46
SGMS1-208ENST00000608287 FAM47BQ8NA70 645 aa17.92■□□□□ 0.46
SGMS1-208ENST00000608287 REPS1Q96D71 796 aa17.92■□□□□ 0.46
SGMS1-208ENST00000608287 NSUN5Q96P11 429 aaKnown RBP17.92■□□□□ 0.46
SGMS1-208ENST00000608287 CDK15Q96Q40 435 aa17.92■□□□□ 0.46
SGMS1-208ENST00000608287 TBCDQ9BTW9 1192 aa17.92■□□□□ 0.46
SGMS1-208ENST00000608287 KCNK13Q9HB14 408 aa17.92■□□□□ 0.46
SGMS1-208ENST00000608287 KCNJ16Q9NPI9 418 aa17.92■□□□□ 0.46
SGMS1-208ENST00000608287 DMRT3Q9NQL9 472 aa17.92■□□□□ 0.46
SGMS1-208ENST00000608287 NECTIN3Q9NQS3 549 aa17.92■□□□□ 0.46
SGMS1-208ENST00000608287 TMEM216Q9P0N5 145 aa17.92■□□□□ 0.46
SGMS1-208ENST00000608287 DAPP1Q9UN19 280 aa17.92■□□□□ 0.46
SGMS1-208ENST00000608287 MRPS33Q9Y291 106 aaKnown RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms