RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 PTPMT1Q8WUK0 201 aaPredicted RBP16.86■□□□□ 0.29
CCDC12-208ENST00000603885 MAGED4Q96JG8 741 aa16.86■□□□□ 0.29
CCDC12-208ENST00000603885 SCYL1Q96KG9 808 aa16.86■□□□□ 0.29
CCDC12-208ENST00000603885 SORBS1Q9BX66 1292 aaKnown RBP16.86■□□□□ 0.29
CCDC12-208ENST00000603885 XPR1Q9UBH6 696 aa16.86■□□□□ 0.29
CCDC12-208ENST00000603885 PHF11Q9UIL8 331 aa16.86■□□□□ 0.29
CCDC12-208ENST00000603885 NPIPA1Q9UND3 350 aa16.86■□□□□ 0.29
CCDC12-208ENST00000603885 YARS2Q9Y2Z4 477 aaKnown RBP16.86■□□□□ 0.29
CCDC12-208ENST00000603885 MYO7BQ6PIF6 2116 aa16.85■□□□□ 0.29
CCDC12-208ENST00000603885 TEX15Q9BXT5 2789 aa16.85■□□□□ 0.29
CCDC12-208ENST00000603885 CRYBG3Q68DQ2 2970 aa16.85■□□□□ 0.29
CCDC12-208ENST00000603885 C17orf105B2RV13 164 aa16.85■□□□□ 0.29
CCDC12-208ENST00000603885 CCL21O00585 134 aa16.85■□□□□ 0.29
CCDC12-208ENST00000603885 PLPP1O14494 284 aa16.85■□□□□ 0.29
CCDC12-208ENST00000603885 PRKNO60260 465 aaPredicted RBP16.85■□□□□ 0.29
CCDC12-208ENST00000603885 SMIM24O75264 130 aa16.85■□□□□ 0.29
CCDC12-208ENST00000603885 WISP2O76076 250 aa16.85■□□□□ 0.29
CCDC12-208ENST00000603885 CLDN9O95484 217 aa16.85■□□□□ 0.29
CCDC12-208ENST00000603885 COX7A2P14406 83 aa16.85■□□□□ 0.29
CCDC12-208ENST00000603885 ARL1P40616 181 aaPredicted RBP16.85■□□□□ 0.29
CCDC12-208ENST00000603885 ID2Q02363 134 aa16.85■□□□□ 0.29
CCDC12-208ENST00000603885 MTFR2Q6P444 385 aa16.85■□□□□ 0.29
CCDC12-208ENST00000603885 GPR180Q86V85 440 aa16.85■□□□□ 0.29
CCDC12-208ENST00000603885 SIAH3Q8IW03 269 aa16.85■□□□□ 0.29
CCDC12-208ENST00000603885 ZCCHC7Q8N3Z6 543 aaKnown RBP16.85■□□□□ 0.29
CCDC12-208ENST00000603885 CPSF7Q8N684 471 aaKnown RBP16.85■□□□□ 0.29
CCDC12-208ENST00000603885 CEP112Q8N8E3 955 aa16.85■□□□□ 0.29
CCDC12-208ENST00000603885 L3MBTL4Q8NA19 623 aa16.85■□□□□ 0.29
CCDC12-208ENST00000603885 POGLUT1Q8NBL1 392 aa16.85■□□□□ 0.29
CCDC12-208ENST00000603885 DCAKDQ8WVC6 231 aa16.85■□□□□ 0.29
CCDC12-208ENST00000603885 ATP6V1E2Q96A05 226 aa16.85■□□□□ 0.29
CCDC12-208ENST00000603885 PHF21BQ96EK2 531 aa16.85■□□□□ 0.29
CCDC12-208ENST00000603885 OR8D2Q9GZM6 311 aa16.85■□□□□ 0.29
CCDC12-208ENST00000603885 NOL11Q9H8H0 719 aaKnown RBP16.85■□□□□ 0.29
CCDC12-208ENST00000603885 SH3BGRL2Q9UJC5 107 aa16.85■□□□□ 0.29
CCDC12-208ENST00000603885 RNF11Q9Y3C5 154 aa16.85■□□□□ 0.29
CCDC12-208ENST00000603885 EXOC1LA0A1B0GW35 172 aa16.84■□□□□ 0.29
CCDC12-208ENST00000603885 TRIM49D1C9J1S8 452 aa16.84■□□□□ 0.29
CCDC12-208ENST00000603885 KLRC4-KLRK1H3BQV0 150 aa16.84■□□□□ 0.29
CCDC12-208ENST00000603885 STX16-NPEPL1H3BU86 382 aa16.84■□□□□ 0.29
CCDC12-208ENST00000603885 STX16O14662 325 aa16.84■□□□□ 0.29
CCDC12-208ENST00000603885 TLX1P31314 330 aaPredicted RBP16.84■□□□□ 0.29
CCDC12-208ENST00000603885 CCNG1P51959 295 aa16.84■□□□□ 0.29
CCDC12-208ENST00000603885 TNFRSF17Q02223 184 aa16.84■□□□□ 0.29
CCDC12-208ENST00000603885 CUL3Q13618 768 aa16.84■□□□□ 0.29
CCDC12-208ENST00000603885 GPALPP1Q8IXQ4 340 aa16.84■□□□□ 0.29
CCDC12-208ENST00000603885 WDR20Q8TBZ3 569 aa16.84■□□□□ 0.29
CCDC12-208ENST00000603885 SLC2A12Q8TD20 617 aa16.84■□□□□ 0.29
CCDC12-208ENST00000603885 ASB15Q8WXK1 588 aa16.84■□□□□ 0.29
CCDC12-208ENST00000603885 ANKRD9Q96BM1 317 aaPredicted RBP16.84■□□□□ 0.29
CCDC12-208ENST00000603885 RPF2Q9H7B2 306 aaKnown RBP16.84■□□□□ 0.29
CCDC12-208ENST00000603885 MYOTQ9UBF9 498 aa16.84■□□□□ 0.29
CCDC12-208ENST00000603885 COPS7AQ9UBW8 275 aa16.84■□□□□ 0.29
CCDC12-208ENST00000603885 NFU1Q9UMS0 254 aa16.84■□□□□ 0.29
CCDC12-208ENST00000603885 ERVK-11Q9UQG0 969 aa16.84■□□□□ 0.29
CCDC12-208ENST00000603885 CELSR2Q9HCU4 2923 aa16.83■□□□□ 0.29
CCDC12-208ENST00000603885 TMEM200CA6NKL6 621 aa16.83■□□□□ 0.28
CCDC12-208ENST00000603885 A8MVJ9 347 aa16.83■□□□□ 0.28
CCDC12-208ENST00000603885 FOXE1O00358 373 aaPredicted RBP16.83■□□□□ 0.28
CCDC12-208ENST00000603885 OR7A17O14581 309 aa16.83■□□□□ 0.28
CCDC12-208ENST00000603885 ASNA1O43681 348 aa16.83■□□□□ 0.28
CCDC12-208ENST00000603885 FGF17O60258 216 aa16.83■□□□□ 0.28
CCDC12-208ENST00000603885 OR2J2O76002 312 aa16.83■□□□□ 0.28
CCDC12-208ENST00000603885 SNRPAP09012 282 aaKnown RBP16.83■□□□□ 0.28
CCDC12-208ENST00000603885 DCTP40126 519 aa16.83■□□□□ 0.28
CCDC12-208ENST00000603885 BUD31P41223 144 aaPredicted RBP16.83■□□□□ 0.28
CCDC12-208ENST00000603885 STT3AP46977 705 aa16.83■□□□□ 0.28
CCDC12-208ENST00000603885 MEOX1P50221 254 aa16.83■□□□□ 0.28
CCDC12-208ENST00000603885 IGLV3-21P80748 117 aaPredicted RBP16.83■□□□□ 0.28
CCDC12-208ENST00000603885 BIKQ13323 160 aa16.83■□□□□ 0.28
CCDC12-208ENST00000603885 LGSNQ5TDP6 509 aa16.83■□□□□ 0.28
CCDC12-208ENST00000603885 ZNF787Q6DD87 383 aa16.83■□□□□ 0.28
CCDC12-208ENST00000603885 C16orf47Q6ZP98 133 aaPredicted RBP16.83■□□□□ 0.28
CCDC12-208ENST00000603885 SULF2Q8IWU5 870 aa16.83■□□□□ 0.28
CCDC12-208ENST00000603885 IFT20Q8IY31 132 aa16.83■□□□□ 0.28
CCDC12-208ENST00000603885 GHDCQ8N2G8 530 aa16.83■□□□□ 0.28
CCDC12-208ENST00000603885 OR52B6Q8NGF0 335 aa16.83■□□□□ 0.28
CCDC12-208ENST00000603885 OR8K3Q8NH51 312 aa16.83■□□□□ 0.28
CCDC12-208ENST00000603885 TANKQ92844 425 aa16.83■□□□□ 0.28
CCDC12-208ENST00000603885 CCDC120Q96HB5 630 aa16.83■□□□□ 0.28
CCDC12-208ENST00000603885 DGAT2Q96PD7 388 aa16.83■□□□□ 0.28
CCDC12-208ENST00000603885 CDK15Q96Q40 435 aa16.83■□□□□ 0.28
CCDC12-208ENST00000603885 MRPL57Q9BQC6 102 aaKnown RBP16.83■□□□□ 0.28
CCDC12-208ENST00000603885 MRPL46Q9H2W6 279 aaKnown RBP16.83■□□□□ 0.28
CCDC12-208ENST00000603885 LIN28AQ9H9Z2 209 aaKnown RBP16.83■□□□□ 0.28
CCDC12-208ENST00000603885 TIMMDC1Q9NPL8 285 aa16.83■□□□□ 0.28
CCDC12-208ENST00000603885 HPF1Q9NWY4 346 aa16.83■□□□□ 0.28
CCDC12-208ENST00000603885 LYARQ9NX58 379 aaKnown RBP16.83■□□□□ 0.28
CCDC12-208ENST00000603885 PSD3Q9NYI0 1048 aa16.83■□□□□ 0.28
CCDC12-208ENST00000603885 PCTPQ9UKL6 214 aa16.83■□□□□ 0.28
CCDC12-208ENST00000603885 ATG4BQ9Y4P1 393 aa16.83■□□□□ 0.28
CCDC12-208ENST00000603885 WWP2O00308 870 aa16.82■□□□□ 0.28
CCDC12-208ENST00000603885 TFECO14948 347 aaPredicted RBP16.82■□□□□ 0.28
CCDC12-208ENST00000603885 DYRK3O43781 588 aa16.82■□□□□ 0.28
CCDC12-208ENST00000603885 PEX1O43933 1283 aa16.82■□□□□ 0.28
CCDC12-208ENST00000603885 ABHD2P08910 425 aa16.82■□□□□ 0.28
CCDC12-208ENST00000603885 BSGP35613 385 aa16.82■□□□□ 0.28
CCDC12-208ENST00000603885 NEK2P51955 445 aa16.82■□□□□ 0.28
CCDC12-208ENST00000603885 HNRNPH2P55795 449 aaKnown RBP16.82■□□□□ 0.28
CCDC12-208ENST00000603885 RNF4P78317 190 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms