RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 LRRC14BA6NHZ5 514 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 CHST10O43529 356 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 FRS3O43559 492 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 IGFBP1P08833 259 aaPredicted RBP8.5□□□□□ -1.05
COMMD3-215ENST00000602574 ZNF25P17030 456 aaPredicted RBP8.5□□□□□ -1.05
COMMD3-215ENST00000602574 ATP6V1B2P21281 511 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 YWHABP31946 246 aaKnown RBP8.5□□□□□ -1.05
COMMD3-215ENST00000602574 TAGLN2P37802 199 aaKnown RBP8.5□□□□□ -1.05
COMMD3-215ENST00000602574 LIMS1P48059 325 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 PRRX1P54821 245 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 RAP1BP61224 184 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 ISL1P61371 349 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 BLOC1S1P78537 153 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 SP3Q02447 781 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 KCNH2Q12809 1159 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 MAP4K2Q12851 820 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 CNTN1Q12860 1018 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 GPS1Q13098 491 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 GRM4Q14833 912 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 IMPG1Q17R60 797 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 CTU2Q2VPK5 515 aaKnown RBP8.5□□□□□ -1.05
COMMD3-215ENST00000602574 DCAF10Q5QP82 559 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 ZNF691Q5VV52 312 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 ABLIM2Q6H8Q1 611 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 ETFRF1Q6IPR1 90 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 C1orf94Q6P1W5 598 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 IL20RBQ6UXL0 311 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 TRIM46Q7Z4K8 759 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 RBM23Q86U06 439 aaKnown RBP8.5□□□□□ -1.05
COMMD3-215ENST00000602574 SLFN12Q8IYM2 578 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 STK40Q8N2I9 435 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 NKAPQ8N5F7 415 aaKnown RBP8.5□□□□□ -1.05
COMMD3-215ENST00000602574 DNAAF1Q8NEP3 725 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 OR11H4Q8NGC9 324 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 OR5K1Q8NHB7 308 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 UCN3Q969E3 161 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 RAB3CQ96E17 227 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 HHIPQ96QV1 700 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 SIGLEC11Q96RL6 698 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 TMEM208Q9BTX3 173 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 MRI1Q9BV20 369 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 BRF2Q9HAW0 419 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 FAM118AQ9NWS6 357 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 TAS2R3Q9NYW6 316 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 MUTYHQ9UIF7 546 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 AAR2Q9Y312 384 aaKnown RBP8.5□□□□□ -1.05
COMMD3-215ENST00000602574 MAGEB6P1A0A0J9YX57 407 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 SLC16A3O15427 465 aaKnown RBP8.49□□□□□ -1.05
COMMD3-215ENST00000602574 KCNAB3O43448 404 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 OR10H2O60403 315 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 MAFKO60675 156 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 NR3C1P04150 777 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 CLTBP09497 229 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 STAG3L3P0CL85 134 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 RHCEP18577 417 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 STOMP27105 288 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 ADH6P28332 368 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 PCSK1P29120 753 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 IRS1P35568 1242 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 OPCMLQ14982 345 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 TMEM119Q4V9L6 283 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 SYTL3Q4VX76 610 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 C10orf91Q5T1B1 145 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 KIAA1161Q6NSJ0 714 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 CASP12Q6UXS9 341 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 KIAA0907Q7Z7F0 614 aaPredicted RBP8.49□□□□□ -1.05
COMMD3-215ENST00000602574 NUDT13Q86X67 352 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 LCORLQ8N3X6 602 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 TMEM145Q8NBT3 493 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 SETD9Q8NE22 299 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 GLIS3Q8NEA6 775 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 OR4C15Q8NGM1 316 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 BBS10Q8TAM1 723 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 RSC1A1Q92681 617 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 RAD54LQ92698 747 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 CORO2AQ92828 525 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 TMEM203Q969S6 136 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 SPSB2Q99619 263 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 CPPED1Q9BRF8 314 aaPredicted RBP8.49□□□□□ -1.05
COMMD3-215ENST00000602574 MED28Q9H204 178 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 SOX17Q9H6I2 414 aaPredicted RBP8.49□□□□□ -1.05
COMMD3-215ENST00000602574 PNPOQ9NVS9 261 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 BARHL2Q9NY43 387 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 SCN3BQ9NY72 215 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 SERGEFQ9UGK8 458 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 SEPT9Q9UHD8 586 aaPredicted RBP8.49□□□□□ -1.05
COMMD3-215ENST00000602574 CARHSP1Q9Y2V2 147 aaKnown RBP8.49□□□□□ -1.05
COMMD3-215ENST00000602574 KLK4Q9Y5K2 254 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 OR6C68A6NDL8 312 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 TBC1D3FA6NER0 549 aaPredicted RBP8.49□□□□□ -1.05
COMMD3-215ENST00000602574 ADAM10O14672 748 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 NRP1O14786 923 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 SCAMP3O14828 347 aaKnown RBP8.49□□□□□ -1.05
COMMD3-215ENST00000602574 ANKRD28O15084 1053 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 SLC16A6O15403 523 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 PLA2G10O15496 165 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 ARPC5O15511 151 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 PRDM1O75626 825 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 C6orf47O95873 294 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 AK1P00568 194 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms