RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 PDP2Q9P2J9 529 aa17.01■□□□□ 0.31
VRK3-225ENST00000601912 SERTAD3Q9UJW9 196 aa17.01■□□□□ 0.31
VRK3-225ENST00000601912 CORO2BQ9UQ03 480 aa17.01■□□□□ 0.31
VRK3-225ENST00000601912 CLCA2Q9UQC9 943 aa17.01■□□□□ 0.31
VRK3-225ENST00000601912 ENTPD4Q9Y227 616 aa17.01■□□□□ 0.31
VRK3-225ENST00000601912 WDFY4Q6ZS81 3184 aa17.01■□□□□ 0.31
VRK3-225ENST00000601912 SGK494L7N484 410 aa17.01■□□□□ 0.31
VRK3-225ENST00000601912 ACOT8O14734 319 aa17.01■□□□□ 0.31
VRK3-225ENST00000601912 PRKRAO75569 313 aaKnown RBP17.01■□□□□ 0.31
VRK3-225ENST00000601912 ERAL1O75616 437 aaKnown RBP17.01■□□□□ 0.31
VRK3-225ENST00000601912 LMNAP02545 664 aaKnown RBP17.01■□□□□ 0.31
VRK3-225ENST00000601912 FRKP42685 505 aaPredicted RBP17.01■□□□□ 0.31
VRK3-225ENST00000601912 OLR1P78380 273 aa17.01■□□□□ 0.31
VRK3-225ENST00000601912 SPIDRQ14159 915 aa17.01■□□□□ 0.31
VRK3-225ENST00000601912 MLC1Q15049 377 aa17.01■□□□□ 0.31
VRK3-225ENST00000601912 FAM180BQ6P0A1 224 aa17.01■□□□□ 0.31
VRK3-225ENST00000601912 ZNF574Q6ZN55 896 aaPredicted RBP17.01■□□□□ 0.31
VRK3-225ENST00000601912 SAMD14Q8IZD0 417 aaPredicted RBP17.01■□□□□ 0.31
VRK3-225ENST00000601912 SUMF1Q8NBK3 374 aa17.01■□□□□ 0.31
VRK3-225ENST00000601912 OR9A4Q8NGU2 314 aa17.01■□□□□ 0.31
VRK3-225ENST00000601912 OR10A6Q8NH74 314 aa17.01■□□□□ 0.31
VRK3-225ENST00000601912 UCN3Q969E3 161 aa17.01■□□□□ 0.31
VRK3-225ENST00000601912 GFM1Q96RP9 751 aaKnown RBP17.01■□□□□ 0.31
VRK3-225ENST00000601912 SPRTNQ9H040 489 aaPredicted RBP17.01■□□□□ 0.31
VRK3-225ENST00000601912 PCDHAC1Q9H158 963 aa17.01■□□□□ 0.31
VRK3-225ENST00000601912 MUC13Q9H3R2 512 aa17.01■□□□□ 0.31
VRK3-225ENST00000601912 RPF2Q9H7B2 306 aaKnown RBP17.01■□□□□ 0.31
VRK3-225ENST00000601912 KAT8Q9H7Z6 458 aaKnown RBP17.01■□□□□ 0.31
VRK3-225ENST00000601912 TPT1P8Q9HAU6 139 aa17.01■□□□□ 0.31
VRK3-225ENST00000601912 ENAMQ9NRM1 1142 aa17.01■□□□□ 0.31
VRK3-225ENST00000601912 ERVK-11Q9UQG0 969 aa17.01■□□□□ 0.31
VRK3-225ENST00000601912 ZNF780BQ9Y6R6 833 aa17.01■□□□□ 0.31
VRK3-225ENST00000601912 RALGAPA1Q6GYQ0 2036 aa17■□□□□ 0.31
VRK3-225ENST00000601912 CASC3O15234 703 aaKnown RBP17■□□□□ 0.31
VRK3-225ENST00000601912 NSA2O95478 260 aaKnown RBP17■□□□□ 0.31
VRK3-225ENST00000601912 ATP6V1G2O95670 118 aa17■□□□□ 0.31
VRK3-225ENST00000601912 HTR1EP28566 365 aa17■□□□□ 0.31
VRK3-225ENST00000601912 AVPR1BP47901 424 aa17■□□□□ 0.31
VRK3-225ENST00000601912 GPR19Q15760 415 aa17■□□□□ 0.31
VRK3-225ENST00000601912 AASDHQ4L235 1098 aaPredicted RBP17■□□□□ 0.31
VRK3-225ENST00000601912 OR52E8Q6IFG1 317 aa17■□□□□ 0.31
VRK3-225ENST00000601912 TLDC1Q6P9B6 456 aa17■□□□□ 0.31
VRK3-225ENST00000601912 DHFR2Q86XF0 187 aa17■□□□□ 0.31
VRK3-225ENST00000601912 HIPK4Q8NE63 616 aa17■□□□□ 0.31
VRK3-225ENST00000601912 FAM120BQ96EK7 910 aaKnown RBP17■□□□□ 0.31
VRK3-225ENST00000601912 C10orf90Q96M02 699 aa17■□□□□ 0.31
VRK3-225ENST00000601912 LRGUKQ96M69 825 aa17■□□□□ 0.31
VRK3-225ENST00000601912 COL25A1Q9BXS0 654 aaPredicted RBP17■□□□□ 0.31
VRK3-225ENST00000601912 TRIM15Q9C019 465 aa17■□□□□ 0.31
VRK3-225ENST00000601912 IKZF5Q9H5V7 419 aa17■□□□□ 0.31
VRK3-225ENST00000601912 PIF1Q9H611 641 aa17■□□□□ 0.31
VRK3-225ENST00000601912 CLK4Q9HAZ1 481 aaKnown RBP17■□□□□ 0.31
VRK3-225ENST00000601912 FTSJ1Q9UET6 329 aa17■□□□□ 0.31
VRK3-225ENST00000601912 CES1P1Q9UKY3 287 aa17■□□□□ 0.31
VRK3-225ENST00000601912 GPR179Q6PRD1 2367 aa17■□□□□ 0.31
VRK3-225ENST00000601912 NUP214P35658 2090 aaPredicted RBP16.99■□□□□ 0.31
VRK3-225ENST00000601912 A0A0A6YYC8 382 aaPredicted RBP16.99■□□□□ 0.31
VRK3-225ENST00000601912 IGHV5-10-1A0A0J9YXX1 117 aa16.99■□□□□ 0.31
VRK3-225ENST00000601912 I3L1I5 382 aaPredicted RBP16.99■□□□□ 0.31
VRK3-225ENST00000601912 RDH16O75452 317 aa16.99■□□□□ 0.31
VRK3-225ENST00000601912 GP1BAP07359 652 aa16.99■□□□□ 0.31
VRK3-225ENST00000601912 FOLR1P15328 257 aa16.99■□□□□ 0.31
VRK3-225ENST00000601912 CSNK2A2P19784 350 aaPredicted RBP16.99■□□□□ 0.31
VRK3-225ENST00000601912 MPIP34949 423 aa16.99■□□□□ 0.31
VRK3-225ENST00000601912 ITGA1P56199 1179 aa16.99■□□□□ 0.31
VRK3-225ENST00000601912 SF3A2Q15428 464 aaKnown RBP16.99■□□□□ 0.31
VRK3-225ENST00000601912 TMPRSS9Q7Z410 1059 aa16.99■□□□□ 0.31
VRK3-225ENST00000601912 ARHGAP22Q7Z5H3 698 aa16.99■□□□□ 0.31
VRK3-225ENST00000601912 CA13Q8N1Q1 262 aa16.99■□□□□ 0.31
VRK3-225ENST00000601912 BHLHE22Q8NFJ8 381 aaPredicted RBP16.99■□□□□ 0.31
VRK3-225ENST00000601912 OR2T12Q8NG77 320 aa16.99■□□□□ 0.31
VRK3-225ENST00000601912 ZNF583Q96ND8 569 aa16.99■□□□□ 0.31
VRK3-225ENST00000601912 SLC35A5Q9BS91 424 aa16.99■□□□□ 0.31
VRK3-225ENST00000601912 RASSF4Q9H2L5 321 aa16.99■□□□□ 0.31
VRK3-225ENST00000601912 SLAMF7Q9NQ25 335 aa16.99■□□□□ 0.31
VRK3-225ENST00000601912 SNX8Q9Y5X2 465 aa16.99■□□□□ 0.31
VRK3-225ENST00000601912 GMEB1Q9Y692 573 aa16.99■□□□□ 0.31
VRK3-225ENST00000601912 CACNA1HO95180 2353 aa16.99■□□□□ 0.31
VRK3-225ENST00000601912 MYO1GB0I1T2 1018 aa16.98■□□□□ 0.31
VRK3-225ENST00000601912 DNAJB6O75190 326 aa16.98■□□□□ 0.31
VRK3-225ENST00000601912 GMNNO75496 209 aa16.98■□□□□ 0.31
VRK3-225ENST00000601912 GPX2P18283 190 aa16.98■□□□□ 0.31
VRK3-225ENST00000601912 UQCRC2P22695 453 aa16.98■□□□□ 0.31
VRK3-225ENST00000601912 ACP1P24666 158 aa16.98■□□□□ 0.31
VRK3-225ENST00000601912 SOAT1P35610 550 aa16.98■□□□□ 0.31
VRK3-225ENST00000601912 CHI3L1P36222 383 aaPredicted RBP16.98■□□□□ 0.31
VRK3-225ENST00000601912 NCBP2P52298 156 aaKnown RBP eCLIP16.98■□□□□ 0.31
VRK3-225ENST00000601912 RAB38P57729 211 aa16.98■□□□□ 0.31
VRK3-225ENST00000601912 ACY1Q03154 408 aa16.98■□□□□ 0.31
VRK3-225ENST00000601912 ABHD18Q0P651 414 aa16.98■□□□□ 0.31
VRK3-225ENST00000601912 HSPB3Q12988 150 aa16.98■□□□□ 0.31
VRK3-225ENST00000601912 GAB1Q13480 694 aa16.98■□□□□ 0.31
VRK3-225ENST00000601912 CCNIQ14094 377 aa16.98■□□□□ 0.31
VRK3-225ENST00000601912 ZNF551Q7Z340 670 aaPredicted RBP16.98■□□□□ 0.31
VRK3-225ENST00000601912 PTRH1Q86Y79 214 aaKnown RBP16.98■□□□□ 0.31
VRK3-225ENST00000601912 OR5T3Q8NGG3 340 aa16.98■□□□□ 0.31
VRK3-225ENST00000601912 SLC26A7Q8TE54 656 aa16.98■□□□□ 0.31
VRK3-225ENST00000601912 ADAMTS18Q8TE60 1221 aa16.98■□□□□ 0.31
VRK3-225ENST00000601912 ZFP90Q8TF47 636 aa16.98■□□□□ 0.31
VRK3-225ENST00000601912 AMDHD1Q96NU7 426 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms