RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 GPRC5BQ9NZH0 403 aa13.6□□□□□ -0.23
IRF3-223ENST00000599223 ESYT3A0FGR9 886 aa13.59□□□□□ -0.23
IRF3-223ENST00000599223 NPIPA2E9PIF3 369 aa13.59□□□□□ -0.23
IRF3-223ENST00000599223 NPIPA3F8WFD2 350 aa13.59□□□□□ -0.23
IRF3-223ENST00000599223 CLDN4O14493 209 aa13.59□□□□□ -0.23
IRF3-223ENST00000599223 H2AFYO75367 372 aaKnown RBP13.59□□□□□ -0.23
IRF3-223ENST00000599223 ETHE1O95571 254 aa13.59□□□□□ -0.23
IRF3-223ENST00000599223 C1QAP02745 245 aa13.59□□□□□ -0.23
IRF3-223ENST00000599223 IFNA16P05015 189 aa13.59□□□□□ -0.23
IRF3-223ENST00000599223 CCL3P10147 92 aa13.59□□□□□ -0.23
IRF3-223ENST00000599223 CD1DP15813 335 aa13.59□□□□□ -0.23
IRF3-223ENST00000599223 MAGEA5P43359 124 aa13.59□□□□□ -0.23
IRF3-223ENST00000599223 PLGLB1Q02325 96 aa13.59□□□□□ -0.23
IRF3-223ENST00000599223 BMPR2Q13873 1038 aa13.59□□□□□ -0.23
IRF3-223ENST00000599223 PDK4Q16654 411 aa13.59□□□□□ -0.23
IRF3-223ENST00000599223 HSDL2Q6YN16 418 aa13.59□□□□□ -0.23
IRF3-223ENST00000599223 SPNS3Q6ZMD2 512 aa13.59□□□□□ -0.23
IRF3-223ENST00000599223 GPALPP1Q8IXQ4 340 aa13.59□□□□□ -0.23
IRF3-223ENST00000599223 ZBED8Q8IZ13 594 aa13.59□□□□□ -0.23
IRF3-223ENST00000599223 TMEM132CQ8N3T6 1108 aa13.59□□□□□ -0.23
IRF3-223ENST00000599223 TMEM251Q8N6I4 163 aa13.59□□□□□ -0.23
IRF3-223ENST00000599223 SNX31Q8N9S9 440 aa13.59□□□□□ -0.23
IRF3-223ENST00000599223 PDPRQ8NCN5 879 aa13.59□□□□□ -0.23
IRF3-223ENST00000599223 OR5M9Q8NGP3 310 aa13.59□□□□□ -0.23
IRF3-223ENST00000599223 OR14A16Q8NHC5 309 aa13.59□□□□□ -0.23
IRF3-223ENST00000599223 LILRB4Q8NHJ6 448 aa13.59□□□□□ -0.23
IRF3-223ENST00000599223 SLC2A12Q8TD20 617 aa13.59□□□□□ -0.23
IRF3-223ENST00000599223 NRGNQ92686 78 aa13.59□□□□□ -0.23
IRF3-223ENST00000599223 EXT2Q93063 718 aa13.59□□□□□ -0.23
IRF3-223ENST00000599223 MS4A8Q9BY19 250 aa13.59□□□□□ -0.23
IRF3-223ENST00000599223 ALOXE3Q9BYJ1 711 aa13.59□□□□□ -0.23
IRF3-223ENST00000599223 TSPYL1Q9H0U9 437 aa13.59□□□□□ -0.23
IRF3-223ENST00000599223 COPS7BQ9H9Q2 264 aaPredicted RBP13.59□□□□□ -0.23
IRF3-223ENST00000599223 SEMA4BQ9NPR2 832 aaPredicted RBP13.59□□□□□ -0.23
IRF3-223ENST00000599223 VTI1BQ9UEU0 232 aa13.59□□□□□ -0.23
IRF3-223ENST00000599223 NFU1Q9UMS0 254 aa13.59□□□□□ -0.23
IRF3-223ENST00000599223 MRPS33Q9Y291 106 aaKnown RBP13.59□□□□□ -0.23
IRF3-223ENST00000599223 FAM215AQ9Y5M1 114 aa13.59□□□□□ -0.23
IRF3-223ENST00000599223 CLCA3PQ9Y6N3 262 aa13.59□□□□□ -0.23
IRF3-223ENST00000599223 ITPR3Q14573 2671 aa13.59□□□□□ -0.23
IRF3-223ENST00000599223 FREM3P0C091 2139 aa13.58□□□□□ -0.23
IRF3-223ENST00000599223 ANKHD1Q8IWZ3 2542 aaKnown RBP13.58□□□□□ -0.23
IRF3-223ENST00000599223 EXPH5Q8NEV8 1989 aa13.58□□□□□ -0.24
IRF3-223ENST00000599223 A0A088AWK7 358 aa13.58□□□□□ -0.24
IRF3-223ENST00000599223 ANKDD1BA6NHY2 528 aa13.58□□□□□ -0.24
IRF3-223ENST00000599223 C17orf105B2RV13 164 aa13.58□□□□□ -0.24
IRF3-223ENST00000599223 CTNSO60931 367 aa13.58□□□□□ -0.24
IRF3-223ENST00000599223 SH3BGRLO75368 114 aa13.58□□□□□ -0.24
IRF3-223ENST00000599223 CCDC166P0CW27 439 aa13.58□□□□□ -0.24
IRF3-223ENST00000599223 CAPN3P20807 821 aa13.58□□□□□ -0.24
IRF3-223ENST00000599223 ZNF10P21506 573 aaPredicted RBP13.58□□□□□ -0.24
IRF3-223ENST00000599223 SSTR1P30872 391 aa13.58□□□□□ -0.24
IRF3-223ENST00000599223 DNASE1L1P49184 302 aa13.58□□□□□ -0.24
IRF3-223ENST00000599223 RNF4P78317 190 aa13.58□□□□□ -0.24
IRF3-223ENST00000599223 POU4F1Q01851 419 aa13.58□□□□□ -0.24
IRF3-223ENST00000599223 PMPCAQ10713 525 aa13.58□□□□□ -0.24
IRF3-223ENST00000599223 FOXO1Q12778 655 aa13.58□□□□□ -0.24
IRF3-223ENST00000599223 BEND6Q5SZJ8 279 aaPredicted RBP13.58□□□□□ -0.24
IRF3-223ENST00000599223 RTL6Q6ICC9 239 aa13.58□□□□□ -0.24
IRF3-223ENST00000599223 ADGRD1Q6QNK2 874 aa13.58□□□□□ -0.24
IRF3-223ENST00000599223 RTL4Q6ZR62 310 aa13.58□□□□□ -0.24
IRF3-223ENST00000599223 GPSM1Q86YR5 675 aa13.58□□□□□ -0.24
IRF3-223ENST00000599223 DMRTC2Q8IXT2 367 aaPredicted RBP13.58□□□□□ -0.24
IRF3-223ENST00000599223 RNF175Q8N4F7 328 aa13.58□□□□□ -0.24
IRF3-223ENST00000599223 MORN4Q8NDC4 146 aa13.58□□□□□ -0.24
IRF3-223ENST00000599223 ASB5Q8WWX0 329 aa13.58□□□□□ -0.24
IRF3-223ENST00000599223 RND1Q92730 232 aa13.58□□□□□ -0.24
IRF3-223ENST00000599223 ANKRD9Q96BM1 317 aaPredicted RBP13.58□□□□□ -0.24
IRF3-223ENST00000599223 PTCD3Q96EY7 689 aaKnown RBP13.58□□□□□ -0.24
IRF3-223ENST00000599223 SMC6Q96SB8 1091 aa13.58□□□□□ -0.24
IRF3-223ENST00000599223 FMO2Q99518 471 aa13.58□□□□□ -0.24
IRF3-223ENST00000599223 GPR22Q99680 433 aa13.58□□□□□ -0.24
IRF3-223ENST00000599223 SORBS1Q9BX66 1292 aaKnown RBP13.58□□□□□ -0.24
IRF3-223ENST00000599223 PITHD1Q9GZP4 211 aaPredicted RBP13.58□□□□□ -0.24
IRF3-223ENST00000599223 WHRNQ9P202 907 aa13.58□□□□□ -0.24
IRF3-223ENST00000599223 SNX24Q9Y343 169 aa13.58□□□□□ -0.24
IRF3-223ENST00000599223 ACOT7O00154 380 aa13.57□□□□□ -0.24
IRF3-223ENST00000599223 HRKO00198 91 aa13.57□□□□□ -0.24
IRF3-223ENST00000599223 CLGNO14967 610 aa13.57□□□□□ -0.24
IRF3-223ENST00000599223 FGF17O60258 216 aa13.57□□□□□ -0.24
IRF3-223ENST00000599223 PRKRAO75569 313 aaKnown RBP13.57□□□□□ -0.24
IRF3-223ENST00000599223 STK16O75716 305 aa13.57□□□□□ -0.24
IRF3-223ENST00000599223 SCELO95171 688 aa13.57□□□□□ -0.24
IRF3-223ENST00000599223 IGHG3P01860 377 aa13.57□□□□□ -0.24
IRF3-223ENST00000599223 ENDOUP21128 410 aaKnown RBP13.57□□□□□ -0.24
IRF3-223ENST00000599223 ATP5A1P25705 553 aaKnown RBP13.57□□□□□ -0.24
IRF3-223ENST00000599223 MSH2P43246 934 aa13.57□□□□□ -0.24
IRF3-223ENST00000599223 KCNC1P48547 511 aa13.57□□□□□ -0.24
IRF3-223ENST00000599223 CHIT1Q13231 466 aa13.57□□□□□ -0.24
IRF3-223ENST00000599223 ZKSCAN8Q15776 578 aaPredicted RBP13.57□□□□□ -0.24
IRF3-223ENST00000599223 GXYLT1Q4G148 440 aa13.57□□□□□ -0.24
IRF3-223ENST00000599223 TMEM211Q6ICI0 200 aa13.57□□□□□ -0.24
IRF3-223ENST00000599223 SULT1C3Q6IMI6 304 aa13.57□□□□□ -0.24
IRF3-223ENST00000599223 DGAT2L6Q6ZPD8 337 aa13.57□□□□□ -0.24
IRF3-223ENST00000599223 TRILQ7L0X0 811 aa13.57□□□□□ -0.24
IRF3-223ENST00000599223 C9orf40Q8IXQ3 194 aa13.57□□□□□ -0.24
IRF3-223ENST00000599223 TCAIMQ8N3R3 496 aa13.57□□□□□ -0.24
IRF3-223ENST00000599223 ACOT4Q8N9L9 421 aa13.57□□□□□ -0.24
IRF3-223ENST00000599223 OR5M3Q8NGP4 307 aa13.57□□□□□ -0.24
IRF3-223ENST00000599223 ZNF721Q8TF20 911 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms