RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 ZFP1Q6P2D0 407 aa18.53■□□□□ 0.56
LSM4-203ENST00000593829 SHISA6Q6ZSJ9 500 aa18.53■□□□□ 0.56
LSM4-203ENST00000593829 FRMD7Q6ZUT3 714 aa18.53■□□□□ 0.56
LSM4-203ENST00000593829 PQLC1Q8N2U9 271 aa18.53■□□□□ 0.56
LSM4-203ENST00000593829 OR2L5Q8NG80 312 aa18.53■□□□□ 0.56
LSM4-203ENST00000593829 OR51Q1Q8NH59 317 aa18.53■□□□□ 0.56
LSM4-203ENST00000593829 HUS1BQ8NHY5 278 aa18.53■□□□□ 0.56
LSM4-203ENST00000593829 ADAMTS17Q8TE56 1095 aa18.53■□□□□ 0.56
LSM4-203ENST00000593829 FAR2Q96K12 515 aa18.53■□□□□ 0.56
LSM4-203ENST00000593829 MS4A8Q9BY19 250 aa18.53■□□□□ 0.56
LSM4-203ENST00000593829 C14orf105Q9NVL8 296 aa18.53■□□□□ 0.56
LSM4-203ENST00000593829 OXSMQ9NWU1 459 aa18.53■□□□□ 0.56
LSM4-203ENST00000593829 HCN3Q9P1Z3 774 aa18.53■□□□□ 0.56
LSM4-203ENST00000593829 LOC400499M0QZD8 3231 aa18.52■□□□□ 0.56
LSM4-203ENST00000593829 C15orf38-AP3S2A0A0A6YYH1 394 aa18.52■□□□□ 0.56
LSM4-203ENST00000593829 ZNF860A6NHJ4 632 aa18.52■□□□□ 0.56
LSM4-203ENST00000593829 PPP6CO00743 305 aa18.52■□□□□ 0.56
LSM4-203ENST00000593829 B3GALT4O96024 378 aa18.52■□□□□ 0.56
LSM4-203ENST00000593829 TSPAN8P19075 237 aa18.52■□□□□ 0.56
LSM4-203ENST00000593829 OTX2P32243 289 aa18.52■□□□□ 0.56
LSM4-203ENST00000593829 DNAJB13P59910 316 aa18.52■□□□□ 0.56
LSM4-203ENST00000593829 NAA20P61599 178 aa18.52■□□□□ 0.56
LSM4-203ENST00000593829 PHEXP78562 749 aa18.52■□□□□ 0.56
LSM4-203ENST00000593829 TGM3Q08188 693 aa18.52■□□□□ 0.56
LSM4-203ENST00000593829 KLF10Q13118 480 aa18.52■□□□□ 0.56
LSM4-203ENST00000593829 DDX39BQ13838 428 aaKnown RBP18.52■□□□□ 0.56
LSM4-203ENST00000593829 GGTA1PQ4G0N0 100 aa18.52■□□□□ 0.56
LSM4-203ENST00000593829 ARPINQ7Z6K5 226 aa18.52■□□□□ 0.56
LSM4-203ENST00000593829 PRSS58Q8IYP2 241 aa18.52■□□□□ 0.56
LSM4-203ENST00000593829 CCNYL1Q8N7R7 359 aa18.52■□□□□ 0.56
LSM4-203ENST00000593829 OR4F6Q8NGB9 312 aa18.52■□□□□ 0.56
LSM4-203ENST00000593829 CMTM7Q96FZ5 175 aa18.52■□□□□ 0.56
LSM4-203ENST00000593829 CNDP1Q96KN2 507 aa18.52■□□□□ 0.56
LSM4-203ENST00000593829 SERPINI1Q99574 410 aa18.52■□□□□ 0.56
LSM4-203ENST00000593829 CLK4Q9HAZ1 481 aaKnown RBP18.52■□□□□ 0.56
LSM4-203ENST00000593829 BCAP29Q9UHQ4 241 aa18.52■□□□□ 0.56
LSM4-203ENST00000593829 MGAQ8IWI9 3026 aa18.52■□□□□ 0.55
LSM4-203ENST00000593829 C4orf51C9J302 202 aa18.51■□□□□ 0.55
LSM4-203ENST00000593829 MLYCDO95822 493 aa18.51■□□□□ 0.55
LSM4-203ENST00000593829 ADSLP30566 484 aaPredicted RBP18.51■□□□□ 0.55
LSM4-203ENST00000593829 ERFP50548 548 aa18.51■□□□□ 0.55
LSM4-203ENST00000593829 TBR1Q16650 682 aa18.51■□□□□ 0.55
LSM4-203ENST00000593829 TRIM40Q6P9F5 258 aa18.51■□□□□ 0.55
LSM4-203ENST00000593829 ATG14Q6ZNE5 492 aa18.51■□□□□ 0.55
LSM4-203ENST00000593829 CHSY3Q70JA7 882 aa18.51■□□□□ 0.55
LSM4-203ENST00000593829 HPS6Q86YV9 775 aa18.51■□□□□ 0.55
LSM4-203ENST00000593829 TMEM151BQ8IW70 566 aa18.51■□□□□ 0.55
LSM4-203ENST00000593829 SRFBP1Q8NEF9 429 aaKnown RBP18.51■□□□□ 0.55
LSM4-203ENST00000593829 IP6K3Q96PC2 410 aa18.51■□□□□ 0.55
LSM4-203ENST00000593829 F2RL3Q96RI0 385 aa18.51■□□□□ 0.55
LSM4-203ENST00000593829 MTERF1Q99551 399 aaKnown RBP18.51■□□□□ 0.55
LSM4-203ENST00000593829 BMP10O95393 424 aa18.51■□□□□ 0.55
LSM4-203ENST00000593829 TGFB1P01137 390 aa18.51■□□□□ 0.55
LSM4-203ENST00000593829 ZNF10P21506 573 aaPredicted RBP18.51■□□□□ 0.55
LSM4-203ENST00000593829 ARRB2P32121 409 aa18.51■□□□□ 0.55
LSM4-203ENST00000593829 XCR1P46094 333 aa18.51■□□□□ 0.55
LSM4-203ENST00000593829 PLA2G16P53816 162 aa18.51■□□□□ 0.55
LSM4-203ENST00000593829 NAGLUP54802 743 aa18.51■□□□□ 0.55
LSM4-203ENST00000593829 BTN3A2P78410 334 aa18.51■□□□□ 0.55
LSM4-203ENST00000593829 LCP2Q13094 533 aa18.51■□□□□ 0.55
LSM4-203ENST00000593829 TMEM35AQ53FP2 167 aa18.51■□□□□ 0.55
LSM4-203ENST00000593829 BORAQ6PGQ7 559 aa18.51■□□□□ 0.55
LSM4-203ENST00000593829 TICAM1Q8IUC6 712 aa18.51■□□□□ 0.55
LSM4-203ENST00000593829 ZC3H7AQ8IWR0 971 aaKnown RBP18.51■□□□□ 0.55
LSM4-203ENST00000593829 OR5T3Q8NGG3 340 aa18.51■□□□□ 0.55
LSM4-203ENST00000593829 NACC2Q96BF6 587 aa18.51■□□□□ 0.55
LSM4-203ENST00000593829 ZNF382Q96SR6 550 aa18.51■□□□□ 0.55
LSM4-203ENST00000593829 CRB3Q9BUF7 120 aa18.51■□□□□ 0.55
LSM4-203ENST00000593829 ZNF696Q9H7X3 374 aa18.51■□□□□ 0.55
LSM4-203ENST00000593829 DMRT3Q9NQL9 472 aa18.51■□□□□ 0.55
LSM4-203ENST00000593829 SEMA3GQ9NS98 782 aa18.51■□□□□ 0.55
LSM4-203ENST00000593829 MAN2B2Q9Y2E5 1009 aa18.51■□□□□ 0.55
LSM4-203ENST00000593829 NBEAQ8NFP9 2946 aa18.5■□□□□ 0.55
LSM4-203ENST00000593829 A0A1B0GTL3 188 aa18.5■□□□□ 0.55
LSM4-203ENST00000593829 IGHEP01854 428 aa18.5■□□□□ 0.55
LSM4-203ENST00000593829 IL10P22301 178 aa18.5■□□□□ 0.55
LSM4-203ENST00000593829 MMP11P24347 488 aa18.5■□□□□ 0.55
LSM4-203ENST00000593829 C10orf62Q5T681 223 aaPredicted RBP18.5■□□□□ 0.55
LSM4-203ENST00000593829 LIPMQ5VYY2 423 aa18.5■□□□□ 0.55
LSM4-203ENST00000593829 FRG2Q64ET8 278 aa18.5■□□□□ 0.55
LSM4-203ENST00000593829 LETMD1Q6P1Q0 360 aa18.5■□□□□ 0.55
LSM4-203ENST00000593829 ABHD17CQ6PCB6 329 aa18.5■□□□□ 0.55
LSM4-203ENST00000593829 C16orf89Q6UX73 402 aa18.5■□□□□ 0.55
LSM4-203ENST00000593829 LAPTM4BQ86VI4 370 aa18.5■□□□□ 0.55
LSM4-203ENST00000593829 ADCY4Q8NFM4 1077 aa18.5■□□□□ 0.55
LSM4-203ENST00000593829 WDR20Q8TBZ3 569 aa18.5■□□□□ 0.55
LSM4-203ENST00000593829 EXTL1Q92935 676 aa18.5■□□□□ 0.55
LSM4-203ENST00000593829 FRG2BQ96QU4 278 aa18.5■□□□□ 0.55
LSM4-203ENST00000593829 MRPS26Q9BYN8 205 aaKnown RBP18.5■□□□□ 0.55
LSM4-203ENST00000593829 GSTO2Q9H4Y5 243 aa18.5■□□□□ 0.55
LSM4-203ENST00000593829 C3orf18Q9UK00 162 aa18.5■□□□□ 0.55
LSM4-203ENST00000593829 SCN3AQ9NY46 2000 aa18.5■□□□□ 0.55
LSM4-203ENST00000593829 A0A0G2JN53 185 aa18.49■□□□□ 0.55
LSM4-203ENST00000593829 CHST10O43529 356 aa18.49■□□□□ 0.55
LSM4-203ENST00000593829 PTX3P26022 381 aaPredicted RBP18.49■□□□□ 0.55
LSM4-203ENST00000593829 HSPA13P48723 471 aa18.49■□□□□ 0.55
LSM4-203ENST00000593829 OLR1P78380 273 aa18.49■□□□□ 0.55
LSM4-203ENST00000593829 LRRC36Q1X8D7 754 aa18.49■□□□□ 0.55
LSM4-203ENST00000593829 SH2D4BQ5SQS7 431 aa18.49■□□□□ 0.55
LSM4-203ENST00000593829 DEPDC1Q5TB30 811 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms