RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 DEPPQ9NTK1 212 aa17.5■□□□□ 0.39
CCDC43-205ENST00000592333 GRHL1Q9NZI5 618 aa17.5■□□□□ 0.39
CCDC43-205ENST00000592333 COPS7AQ9UBW8 275 aa17.5■□□□□ 0.39
CCDC43-205ENST00000592333 CSMD2Q7Z408 3487 aa17.49■□□□□ 0.39
CCDC43-205ENST00000592333 FOXO6A8MYZ6 492 aa17.49■□□□□ 0.39
CCDC43-205ENST00000592333 C17orf105B2RV13 164 aa17.49■□□□□ 0.39
CCDC43-205ENST00000592333 K7EPI3 171 aa17.49■□□□□ 0.39
CCDC43-205ENST00000592333 FANCGO15287 622 aa17.49■□□□□ 0.39
CCDC43-205ENST00000592333 CDC40O60508 579 aaKnown RBP eCLIP17.49■□□□□ 0.39
CCDC43-205ENST00000592333 UGDHO60701 494 aa17.49■□□□□ 0.39
CCDC43-205ENST00000592333 PIAS1O75925 651 aa17.49■□□□□ 0.39
CCDC43-205ENST00000592333 GLSO94925 669 aaPredicted RBP17.49■□□□□ 0.39
CCDC43-205ENST00000592333 OR6B1O95007 311 aa17.49■□□□□ 0.39
CCDC43-205ENST00000592333 IGHG3P01860 377 aa17.49■□□□□ 0.39
CCDC43-205ENST00000592333 SNRPB2P08579 225 aaKnown RBP17.49■□□□□ 0.39
CCDC43-205ENST00000592333 LTA4HP09960 611 aaKnown RBP17.49■□□□□ 0.39
CCDC43-205ENST00000592333 SLC35E2BP0CK96 405 aa17.49■□□□□ 0.39
CCDC43-205ENST00000592333 TNNI3P19429 210 aa17.49■□□□□ 0.39
CCDC43-205ENST00000592333 CHRNB4P30926 498 aa17.49■□□□□ 0.39
CCDC43-205ENST00000592333 SOX3P41225 446 aa17.49■□□□□ 0.39
CCDC43-205ENST00000592333 GPX6P59796 221 aa17.49■□□□□ 0.39
CCDC43-205ENST00000592333 GPR85P60893 370 aa17.49■□□□□ 0.39
CCDC43-205ENST00000592333 PPIAP62937 165 aaKnown RBP17.49■□□□□ 0.39
CCDC43-205ENST00000592333 DEPDC1Q5TB30 811 aa17.49■□□□□ 0.39
CCDC43-205ENST00000592333 KHDRBS2Q5VWX1 349 aaKnown RBP17.49■□□□□ 0.39
CCDC43-205ENST00000592333 METTL2BQ6P1Q9 378 aaKnown RBP17.49■□□□□ 0.39
CCDC43-205ENST00000592333 IL20RBQ6UXL0 311 aa17.49■□□□□ 0.39
CCDC43-205ENST00000592333 ZNF793Q6ZN11 406 aa17.49■□□□□ 0.39
CCDC43-205ENST00000592333 CTAGE3PQ8IX95 158 aa17.49■□□□□ 0.39
CCDC43-205ENST00000592333 SLC15A4Q8N697 577 aa17.49■□□□□ 0.39
CCDC43-205ENST00000592333 OR7G3Q8NG95 312 aa17.49■□□□□ 0.39
CCDC43-205ENST00000592333 OR52N2Q8NGI0 321 aa17.49■□□□□ 0.39
CCDC43-205ENST00000592333 LILRB4Q8NHJ6 448 aa17.49■□□□□ 0.39
CCDC43-205ENST00000592333 SLC2A12Q8TD20 617 aa17.49■□□□□ 0.39
CCDC43-205ENST00000592333 CHTF18Q8WVB6 975 aa17.49■□□□□ 0.39
CCDC43-205ENST00000592333 RND1Q92730 232 aa17.49■□□□□ 0.39
CCDC43-205ENST00000592333 TANKQ92844 425 aa17.49■□□□□ 0.39
CCDC43-205ENST00000592333 ART5Q96L15 291 aa17.49■□□□□ 0.39
CCDC43-205ENST00000592333 ATOH8Q96SQ7 321 aa17.49■□□□□ 0.39
CCDC43-205ENST00000592333 MAPKAP1Q9BPZ7 522 aa17.49■□□□□ 0.39
CCDC43-205ENST00000592333 RAB17Q9H0T7 212 aa17.49■□□□□ 0.39
CCDC43-205ENST00000592333 DPH5Q9H2P9 285 aa17.49■□□□□ 0.39
CCDC43-205ENST00000592333 SLC24A3Q9HC58 644 aa17.49■□□□□ 0.39
CCDC43-205ENST00000592333 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.49■□□□□ 0.39
CCDC43-205ENST00000592333 PSD3Q9NYI0 1048 aa17.49■□□□□ 0.39
CCDC43-205ENST00000592333 OPTCQ9UBM4 332 aa17.49■□□□□ 0.39
CCDC43-205ENST00000592333 A0A1B0GVC2 190 aa17.48■□□□□ 0.39
CCDC43-205ENST00000592333 BCKDKO14874 412 aa17.48■□□□□ 0.39
CCDC43-205ENST00000592333 RAD51CO43502 376 aa17.48■□□□□ 0.39
CCDC43-205ENST00000592333 EPB42P16452 691 aa17.48■□□□□ 0.39
CCDC43-205ENST00000592333 TLX1P31314 330 aaPredicted RBP17.48■□□□□ 0.39
CCDC43-205ENST00000592333 STT3AP46977 705 aa17.48■□□□□ 0.39
CCDC43-205ENST00000592333 PLGLB1Q02325 96 aa17.48■□□□□ 0.39
CCDC43-205ENST00000592333 KBTBD12Q3ZCT8 623 aa17.48■□□□□ 0.39
CCDC43-205ENST00000592333 LIPJQ5W064 366 aa17.48■□□□□ 0.39
CCDC43-205ENST00000592333 ADNP2Q6IQ32 1131 aa17.48■□□□□ 0.39
CCDC43-205ENST00000592333 GRHL2Q6ISB3 625 aa17.48■□□□□ 0.39
CCDC43-205ENST00000592333 RAPH1Q70E73 1250 aa17.48■□□□□ 0.39
CCDC43-205ENST00000592333 ZCCHC7Q8N3Z6 543 aaKnown RBP17.48■□□□□ 0.39
CCDC43-205ENST00000592333 ZNF721Q8TF20 911 aa17.48■□□□□ 0.39
CCDC43-205ENST00000592333 ANKRD9Q96BM1 317 aaPredicted RBP17.48■□□□□ 0.39
CCDC43-205ENST00000592333 RBM18Q96H35 190 aaKnown RBP17.48■□□□□ 0.39
CCDC43-205ENST00000592333 PELOQ9BRX2 385 aaKnown RBP17.48■□□□□ 0.39
CCDC43-205ENST00000592333 TTTY12Q9BZ98 90 aa17.48■□□□□ 0.39
CCDC43-205ENST00000592333 OR8D2Q9GZM6 311 aa17.48■□□□□ 0.39
CCDC43-205ENST00000592333 ALG9Q9H6U8 611 aa17.48■□□□□ 0.39
CCDC43-205ENST00000592333 IL1RL2Q9HB29 575 aa17.48■□□□□ 0.39
CCDC43-205ENST00000592333 MCCC2Q9HCC0 563 aa17.48■□□□□ 0.39
CCDC43-205ENST00000592333 SACM1LQ9NTJ5 587 aa17.48■□□□□ 0.39
CCDC43-205ENST00000592333 PHF11Q9UIL8 331 aa17.48■□□□□ 0.39
CCDC43-205ENST00000592333 ACOT9Q9Y305 439 aa17.48■□□□□ 0.39
CCDC43-205ENST00000592333 PCDHGA11Q9Y5H2 935 aa17.48■□□□□ 0.39
CCDC43-205ENST00000592333 WWP2O00308 870 aa17.47■□□□□ 0.39
CCDC43-205ENST00000592333 SUSD5O60279 629 aa17.47■□□□□ 0.39
CCDC43-205ENST00000592333 LDB3O75112 727 aa17.47■□□□□ 0.39
CCDC43-205ENST00000592333 IGFBP2P18065 325 aa17.47■□□□□ 0.39
CCDC43-205ENST00000592333 CPN2P22792 545 aa17.47■□□□□ 0.39
CCDC43-205ENST00000592333 RFC3P40938 356 aa17.47■□□□□ 0.39
CCDC43-205ENST00000592333 SSR2P43308 183 aa17.47■□□□□ 0.39
CCDC43-205ENST00000592333 PHEXP78562 749 aa17.47■□□□□ 0.39
CCDC43-205ENST00000592333 FBXO48Q5FWF7 155 aa17.47■□□□□ 0.39
CCDC43-205ENST00000592333 OR4C11Q6IEV9 310 aa17.47■□□□□ 0.39
CCDC43-205ENST00000592333 C3P1Q6ZMU1 363 aa17.47■□□□□ 0.39
CCDC43-205ENST00000592333 FAM109AQ8N4B1 249 aa17.47■□□□□ 0.39
CCDC43-205ENST00000592333 MARVELD2Q8N4S9 558 aa17.47■□□□□ 0.39
CCDC43-205ENST00000592333 PPM1NQ8N819 430 aa17.47■□□□□ 0.39
CCDC43-205ENST00000592333 RGMAQ96B86 450 aa17.47■□□□□ 0.39
CCDC43-205ENST00000592333 REPS1Q96D71 796 aa17.47■□□□□ 0.39
CCDC43-205ENST00000592333 SCYL1Q96KG9 808 aa17.47■□□□□ 0.39
CCDC43-205ENST00000592333 HRH3Q9Y5N1 445 aa17.47■□□□□ 0.39
CCDC43-205ENST00000592333 A0A087X1B8 175 aa17.46■□□□□ 0.39
CCDC43-205ENST00000592333 FIGNL2A6NMB9 653 aa17.46■□□□□ 0.39
CCDC43-205ENST00000592333 TGFB1P01137 390 aa17.46■□□□□ 0.39
CCDC43-205ENST00000592333 IGKV3-11P04433 115 aa17.46■□□□□ 0.39
CCDC43-205ENST00000592333 P04436 131 aa17.46■□□□□ 0.39
CCDC43-205ENST00000592333 HOXD4P09016 255 aaPredicted RBP17.46■□□□□ 0.39
CCDC43-205ENST00000592333 PTX3P26022 381 aaPredicted RBP17.46■□□□□ 0.39
CCDC43-205ENST00000592333 GALNSP34059 522 aa17.46■□□□□ 0.39
CCDC43-205ENST00000592333 MAGEA4P43358 317 aa17.46■□□□□ 0.39
CCDC43-205ENST00000592333 PLTPP55058 493 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms