RNA–Protein interactions for RNA: ENST00000591935.5

CIRBP-235, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene CIRBP, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-235ENST00000591935 SLC5A6Q9Y289 635 aa16.42■□□□□ 0.22
CIRBP-235ENST00000591935 TNPO3Q9Y5L0 923 aaKnown RBP16.42■□□□□ 0.22
CIRBP-235ENST00000591935 SVILO95425 2214 aa16.42■□□□□ 0.22
CIRBP-235ENST00000591935 OR2W5A6NFC9 320 aa16.41■□□□□ 0.22
CIRBP-235ENST00000591935 UBFD1O14562 309 aaKnown RBP16.41■□□□□ 0.22
CIRBP-235ENST00000591935 AZIN1O14977 448 aa16.41■□□□□ 0.22
CIRBP-235ENST00000591935 PEX11AO75192 247 aa16.41■□□□□ 0.22
CIRBP-235ENST00000591935 ENO2P09104 434 aaPredicted RBP16.41■□□□□ 0.22
CIRBP-235ENST00000591935 C8orf89P0DMQ9 161 aa16.41■□□□□ 0.22
CIRBP-235ENST00000591935 CDH1P12830 882 aa16.41■□□□□ 0.22
CIRBP-235ENST00000591935 CLCQ05315 142 aa16.41■□□□□ 0.22
CIRBP-235ENST00000591935 SQLEQ14534 574 aa16.41■□□□□ 0.22
CIRBP-235ENST00000591935 UGT3A2Q3SY77 523 aa16.41■□□□□ 0.22
CIRBP-235ENST00000591935 C4orf17Q53FE4 359 aa16.41■□□□□ 0.22
CIRBP-235ENST00000591935 HIST2H2BCQ6DN03 193 aa16.41■□□□□ 0.22
CIRBP-235ENST00000591935 TMEM214Q6NUQ4 689 aaKnown RBP16.41■□□□□ 0.22
CIRBP-235ENST00000591935 ASPGQ86U10 573 aa16.41■□□□□ 0.22
CIRBP-235ENST00000591935 OR56A3Q8NH54 315 aa16.41■□□□□ 0.22
CIRBP-235ENST00000591935 ZNF483Q8TF39 744 aaPredicted RBP16.41■□□□□ 0.22
CIRBP-235ENST00000591935 OR4K3Q96R72 315 aa16.41■□□□□ 0.22
CIRBP-235ENST00000591935 CCT7Q99832 543 aa16.41■□□□□ 0.22
CIRBP-235ENST00000591935 ANKHQ9HCJ1 492 aa16.41■□□□□ 0.22
CIRBP-235ENST00000591935 ZBTB26Q9HCK0 441 aa16.41■□□□□ 0.22
CIRBP-235ENST00000591935 PTGFRNQ9P2B2 879 aa16.41■□□□□ 0.22
CIRBP-235ENST00000591935 DOPEY1Q5JWR5 2465 aa16.41■□□□□ 0.22
CIRBP-235ENST00000591935 NPEPPSL1A6NEC2 478 aa16.4■□□□□ 0.22
CIRBP-235ENST00000591935 GUCA1CO95843 209 aa16.4■□□□□ 0.22
CIRBP-235ENST00000591935 SLC35G6P0C7Q6 338 aa16.4■□□□□ 0.22
CIRBP-235ENST00000591935 EDN3P14138 238 aa16.4■□□□□ 0.22
CIRBP-235ENST00000591935 IL1RNP18510 177 aa16.4■□□□□ 0.22
CIRBP-235ENST00000591935 IL10P22301 178 aa16.4■□□□□ 0.22
CIRBP-235ENST00000591935 EEF1DP29692 281 aaKnown RBP16.4■□□□□ 0.22
CIRBP-235ENST00000591935 SOX11P35716 441 aa16.4■□□□□ 0.22
CIRBP-235ENST00000591935 CCR8P51685 355 aa16.4■□□□□ 0.22
CIRBP-235ENST00000591935 PKNOX1P55347 436 aa16.4■□□□□ 0.22
CIRBP-235ENST00000591935 SKP1P63208 163 aa16.4■□□□□ 0.22
CIRBP-235ENST00000591935 MEF2AQ02078 507 aaPredicted RBP16.4■□□□□ 0.22
CIRBP-235ENST00000591935 CYLC2Q14093 348 aaPredicted RBP16.4■□□□□ 0.22
CIRBP-235ENST00000591935 PCOLCEQ15113 449 aa16.4■□□□□ 0.22
CIRBP-235ENST00000591935 PCBP2Q15366 365 aaKnown RBP eCLIP16.4■□□□□ 0.22
CIRBP-235ENST00000591935 CDKL4Q5MAI5 379 aa16.4■□□□□ 0.22
CIRBP-235ENST00000591935 KANK2Q63ZY3 851 aa16.4■□□□□ 0.22
CIRBP-235ENST00000591935 NIPAL1Q6NVV3 410 aa16.4■□□□□ 0.22
CIRBP-235ENST00000591935 FAM180AQ6UWF9 173 aa16.4■□□□□ 0.22
CIRBP-235ENST00000591935 C16orf89Q6UX73 402 aa16.4■□□□□ 0.22
CIRBP-235ENST00000591935 SIRT6Q8N6T7 355 aa16.4■□□□□ 0.22
CIRBP-235ENST00000591935 ABHD11Q8NFV4 315 aa16.4■□□□□ 0.22
CIRBP-235ENST00000591935 ZCCHC10Q8TBK6 192 aa16.4■□□□□ 0.22
CIRBP-235ENST00000591935 BRIX1Q8TDN6 353 aaKnown RBP16.4■□□□□ 0.22
CIRBP-235ENST00000591935 FAR1Q8WVX9 515 aa16.4■□□□□ 0.22
CIRBP-235ENST00000591935 SLC13A3Q8WWT9 602 aa16.4■□□□□ 0.22
CIRBP-235ENST00000591935 HAS2Q92819 552 aa16.4■□□□□ 0.22
CIRBP-235ENST00000591935 EXT2Q93063 718 aa16.4■□□□□ 0.22
CIRBP-235ENST00000591935 C5orf34Q96MH7 638 aa16.4■□□□□ 0.22
CIRBP-235ENST00000591935 THTPAQ9BU02 230 aa16.4■□□□□ 0.22
CIRBP-235ENST00000591935 PLA2G3Q9NZ20 509 aa16.4■□□□□ 0.22
CIRBP-235ENST00000591935 TEKT2Q9UIF3 430 aa16.4■□□□□ 0.22
CIRBP-235ENST00000591935 PRPF19Q9UMS4 504 aaKnown RBP16.4■□□□□ 0.22
CIRBP-235ENST00000591935 SLC22A7Q9Y694 548 aa16.4■□□□□ 0.22
CIRBP-235ENST00000591935 NBPF19A0A087WUL8 3843 aa16.39■□□□□ 0.21
CIRBP-235ENST00000591935 TRAV17A0A0B4J275 112 aa16.39■□□□□ 0.21
CIRBP-235ENST00000591935 TMEM233B4DJY2 109 aa16.39■□□□□ 0.21
CIRBP-235ENST00000591935 SGK494L7N484 410 aa16.39■□□□□ 0.21
CIRBP-235ENST00000591935 UBDO15205 165 aa16.39■□□□□ 0.21
CIRBP-235ENST00000591935 CCNT2O60583 730 aaKnown RBP16.39■□□□□ 0.21
CIRBP-235ENST00000591935 S100BP04271 92 aaPredicted RBP16.39■□□□□ 0.21
CIRBP-235ENST00000591935 GCKP35557 465 aa16.39■□□□□ 0.21
CIRBP-235ENST00000591935 INAQ16352 499 aa16.39■□□□□ 0.21
CIRBP-235ENST00000591935 MINDY4Q4G0A6 757 aa16.39■□□□□ 0.21
CIRBP-235ENST00000591935 CATSPEREQ5SY80 951 aa16.39■□□□□ 0.21
CIRBP-235ENST00000591935 MFSD4BQ5TF39 518 aa16.39■□□□□ 0.21
CIRBP-235ENST00000591935 PGM2L1Q6PCE3 622 aa16.39■□□□□ 0.21
CIRBP-235ENST00000591935 LARP4Q71RC2 724 aaKnown RBP eCLIP16.39■□□□□ 0.21
CIRBP-235ENST00000591935 PDSS2Q86YH6 399 aa16.39■□□□□ 0.21
CIRBP-235ENST00000591935 ULK2Q8IYT8 1036 aa16.39■□□□□ 0.21
CIRBP-235ENST00000591935 MFSD9Q8NBP5 474 aa16.39■□□□□ 0.21
CIRBP-235ENST00000591935 PDPRQ8NCN5 879 aa16.39■□□□□ 0.21
CIRBP-235ENST00000591935 ZNF740Q8NDX6 193 aa16.39■□□□□ 0.21
CIRBP-235ENST00000591935 OR4K1Q8NGD4 311 aa16.39■□□□□ 0.21
CIRBP-235ENST00000591935 OR1N1Q8NGS0 311 aa16.39■□□□□ 0.21
CIRBP-235ENST00000591935 OR51Q1Q8NH59 317 aa16.39■□□□□ 0.21
CIRBP-235ENST00000591935 GRHL3Q8TE85 626 aa16.39■□□□□ 0.21
CIRBP-235ENST00000591935 FBXL8Q96CD0 374 aa16.39■□□□□ 0.21
CIRBP-235ENST00000591935 IMMP1LQ96LU5 166 aa16.39■□□□□ 0.21
CIRBP-235ENST00000591935 ANKRD27Q96NW4 1050 aa16.39■□□□□ 0.21
CIRBP-235ENST00000591935 SARGQ9BW04 601 aa16.39■□□□□ 0.21
CIRBP-235ENST00000591935 VN1R1Q9GZP7 353 aa16.39■□□□□ 0.21
CIRBP-235ENST00000591935 RNF32Q9H0A6 362 aa16.39■□□□□ 0.21
CIRBP-235ENST00000591935 SPNS1Q9H2V7 528 aa16.39■□□□□ 0.21
CIRBP-235ENST00000591935 MID1IP1Q9NPA3 183 aa16.39■□□□□ 0.21
CIRBP-235ENST00000591935 CD274Q9NZQ7 290 aa16.39■□□□□ 0.21
CIRBP-235ENST00000591935 HCN3Q9P1Z3 774 aa16.39■□□□□ 0.21
CIRBP-235ENST00000591935 A0A088AWK7 358 aa16.38■□□□□ 0.21
CIRBP-235ENST00000591935 IGHV3-20A0A0C4DH32 117 aa16.38■□□□□ 0.21
CIRBP-235ENST00000591935 WIPF3A6NGB9 483 aa16.38■□□□□ 0.21
CIRBP-235ENST00000591935 DNAJB6O75190 326 aa16.38■□□□□ 0.21
CIRBP-235ENST00000591935 SIX3O95343 332 aaPredicted RBP16.38■□□□□ 0.21
CIRBP-235ENST00000591935 JUNP05412 331 aaKnown RBP16.38■□□□□ 0.21
CIRBP-235ENST00000591935 ITGAMP11215 1152 aa16.38■□□□□ 0.21
CIRBP-235ENST00000591935 XCR1P46094 333 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms