RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 JMJD1CQ15652 2540 aa14.07□□□□□ -0.16
IFT20-216ENST00000588477 LRIT2A6NDA9 550 aa14.07□□□□□ -0.16
IFT20-216ENST00000588477 SYNDIG1LA6NDD5 238 aa14.07□□□□□ -0.16
IFT20-216ENST00000588477 FAM171A2A8MVW0 826 aa14.07□□□□□ -0.16
IFT20-216ENST00000588477 C17orf105B2RV13 164 aa14.07□□□□□ -0.16
IFT20-216ENST00000588477 CYR61O00622 381 aa14.07□□□□□ -0.16
IFT20-216ENST00000588477 CTNSO60931 367 aa14.07□□□□□ -0.16
IFT20-216ENST00000588477 LDB3O75112 727 aa14.07□□□□□ -0.16
IFT20-216ENST00000588477 EPPINO95925 133 aa14.07□□□□□ -0.16
IFT20-216ENST00000588477 IL2RAP01589 272 aa14.07□□□□□ -0.16
IFT20-216ENST00000588477 AHSGP02765 367 aa14.07□□□□□ -0.16
IFT20-216ENST00000588477 ENO2P09104 434 aaPredicted RBP14.07□□□□□ -0.16
IFT20-216ENST00000588477 CD53P19397 219 aa14.07□□□□□ -0.16
IFT20-216ENST00000588477 PLA2G16P53816 162 aa14.07□□□□□ -0.16
IFT20-216ENST00000588477 LIM2P55344 173 aa14.07□□□□□ -0.16
IFT20-216ENST00000588477 KCNJ2P63252 427 aa14.07□□□□□ -0.16
IFT20-216ENST00000588477 ASPHQ12797 758 aa14.07□□□□□ -0.16
IFT20-216ENST00000588477 PRAMEF20Q5VT98 475 aa14.07□□□□□ -0.16
IFT20-216ENST00000588477 SHEQ5VZ18 495 aa14.07□□□□□ -0.16
IFT20-216ENST00000588477 ADGRD1Q6QNK2 874 aa14.07□□□□□ -0.16
IFT20-216ENST00000588477 MAATS1Q7Z4T9 603 aa14.07□□□□□ -0.16
IFT20-216ENST00000588477 KIF18BQ86Y91 864 aa14.07□□□□□ -0.16
IFT20-216ENST00000588477 VWA5B2Q8N398 1253 aa14.07□□□□□ -0.16
IFT20-216ENST00000588477 LIX1Q8N485 282 aa14.07□□□□□ -0.16
IFT20-216ENST00000588477 LRRN4CLQ8ND94 238 aa14.07□□□□□ -0.16
IFT20-216ENST00000588477 MCUQ8NE86 351 aa14.07□□□□□ -0.16
IFT20-216ENST00000588477 RUNDC3BQ96NL0 473 aa14.07□□□□□ -0.16
IFT20-216ENST00000588477 QRFPRQ96P65 431 aa14.07□□□□□ -0.16
IFT20-216ENST00000588477 REPIN1Q9BWE0 567 aaKnown RBP14.07□□□□□ -0.16
IFT20-216ENST00000588477 EPB41L4BQ9H329 900 aa14.07□□□□□ -0.16
IFT20-216ENST00000588477 ACKR4Q9NPB9 350 aa14.07□□□□□ -0.16
IFT20-216ENST00000588477 BEX4Q9NWD9 120 aaPredicted RBP14.07□□□□□ -0.16
IFT20-216ENST00000588477 IKZF3Q9UKT9 509 aa14.07□□□□□ -0.16
IFT20-216ENST00000588477 DAPP1Q9UN19 280 aa14.07□□□□□ -0.16
IFT20-216ENST00000588477 ARID1AO14497 2285 aa14.07□□□□□ -0.16
IFT20-216ENST00000588477 A0A088AWK7 358 aa14.06□□□□□ -0.16
IFT20-216ENST00000588477 CLCA1A8K7I4 914 aa14.06□□□□□ -0.16
IFT20-216ENST00000588477 AHRRA9YTQ3 701 aa14.06□□□□□ -0.16
IFT20-216ENST00000588477 H2AFYO75367 372 aaKnown RBP14.06□□□□□ -0.16
IFT20-216ENST00000588477 ZNF10P21506 573 aaPredicted RBP14.06□□□□□ -0.16
IFT20-216ENST00000588477 CERS1P27544 350 aa14.06□□□□□ -0.16
IFT20-216ENST00000588477 PCSK6P29122 969 aa14.06□□□□□ -0.16
IFT20-216ENST00000588477 TIMP3P35625 211 aa14.06□□□□□ -0.16
IFT20-216ENST00000588477 AGFG1P52594 562 aaKnown RBP14.06□□□□□ -0.16
IFT20-216ENST00000588477 ZNF136P52737 540 aa14.06□□□□□ -0.16
IFT20-216ENST00000588477 POU4F3Q15319 338 aa14.06□□□□□ -0.16
IFT20-216ENST00000588477 ZNF791Q3KP31 576 aaPredicted RBP14.06□□□□□ -0.16
IFT20-216ENST00000588477 PIGGQ5H8A4 983 aa14.06□□□□□ -0.16
IFT20-216ENST00000588477 SBSNQ6UWP8 590 aa14.06□□□□□ -0.16
IFT20-216ENST00000588477 TMIGD1Q6UXZ0 262 aa14.06□□□□□ -0.16
IFT20-216ENST00000588477 GPATCH11Q8N954 259 aa14.06□□□□□ -0.16
IFT20-216ENST00000588477 ZNF721Q8TF20 911 aa14.06□□□□□ -0.16
IFT20-216ENST00000588477 JSRP1Q96MG2 331 aaPredicted RBP14.06□□□□□ -0.16
IFT20-216ENST00000588477 SERINC2Q96SA4 455 aa14.06□□□□□ -0.16
IFT20-216ENST00000588477 YIPF4Q9BSR8 244 aa14.06□□□□□ -0.16
IFT20-216ENST00000588477 REXO4Q9GZR2 422 aaKnown RBP14.06□□□□□ -0.16
IFT20-216ENST00000588477 ZFP64Q9NPA5 681 aa14.06□□□□□ -0.16
IFT20-216ENST00000588477 HOMER3Q9NSC5 361 aa14.06□□□□□ -0.16
IFT20-216ENST00000588477 COPS7AQ9UBW8 275 aa14.06□□□□□ -0.16
IFT20-216ENST00000588477 BOKQ9UMX3 212 aaPredicted RBP14.06□□□□□ -0.16
IFT20-216ENST00000588477 MED12LQ86YW9 2145 aa14.06□□□□□ -0.16
IFT20-216ENST00000588477 C15orf38-AP3S2A0A0A6YYH1 394 aa14.05□□□□□ -0.16
IFT20-216ENST00000588477 ETHE1O95571 254 aa14.05□□□□□ -0.16
IFT20-216ENST00000588477 C1GALT1C1LP0DN25 315 aa14.05□□□□□ -0.16
IFT20-216ENST00000588477 MAGEA3P43357 314 aa14.05□□□□□ -0.16
IFT20-216ENST00000588477 DUSP8Q13202 625 aa14.05□□□□□ -0.16
IFT20-216ENST00000588477 EFTUD2Q15029 972 aaKnown RBP eCLIP14.05□□□□□ -0.16
IFT20-216ENST00000588477 MPEG1Q2M385 716 aa14.05□□□□□ -0.16
IFT20-216ENST00000588477 ACSF3Q4G176 576 aaPredicted RBP14.05□□□□□ -0.16
IFT20-216ENST00000588477 TRIM40Q6P9F5 258 aa14.05□□□□□ -0.16
IFT20-216ENST00000588477 LACC1Q8IV20 430 aa14.05□□□□□ -0.16
IFT20-216ENST00000588477 CIARTQ8N365 385 aaPredicted RBP14.05□□□□□ -0.16
IFT20-216ENST00000588477 LRRC25Q8N386 305 aaPredicted RBP14.05□□□□□ -0.16
IFT20-216ENST00000588477 TTLQ8NG68 377 aa14.05□□□□□ -0.16
IFT20-216ENST00000588477 OR2L5Q8NG80 312 aa14.05□□□□□ -0.16
IFT20-216ENST00000588477 GABPB2Q8TAK5 448 aaPredicted RBP14.05□□□□□ -0.16
IFT20-216ENST00000588477 PAQR8Q8TEZ7 354 aa14.05□□□□□ -0.16
IFT20-216ENST00000588477 COPS7BQ9H9Q2 264 aaPredicted RBP14.05□□□□□ -0.16
IFT20-216ENST00000588477 PROK2Q9HC23 129 aa14.05□□□□□ -0.16
IFT20-216ENST00000588477 SH2D2AQ9NP31 389 aa14.05□□□□□ -0.16
IFT20-216ENST00000588477 QPCTLQ9NXS2 382 aa14.05□□□□□ -0.16
IFT20-216ENST00000588477 DSCAMO60469 2012 aa14.05□□□□□ -0.16
IFT20-216ENST00000588477 A0A1W2PPR1 153 aa14.04□□□□□ -0.16
IFT20-216ENST00000588477 ANKDD1BA6NHY2 528 aa14.04□□□□□ -0.16
IFT20-216ENST00000588477 LRRC3CA6NJW4 275 aa14.04□□□□□ -0.16
IFT20-216ENST00000588477 ARHGEF9O43307 516 aa14.04□□□□□ -0.16
IFT20-216ENST00000588477 WDR47O94967 919 aa14.04□□□□□ -0.16
IFT20-216ENST00000588477 TBX6O95947 436 aaPredicted RBP14.04□□□□□ -0.16
IFT20-216ENST00000588477 CCDC175P0C221 793 aa14.04□□□□□ -0.16
IFT20-216ENST00000588477 GNAZP19086 355 aa14.04□□□□□ -0.16
IFT20-216ENST00000588477 GDF5P43026 501 aa14.04□□□□□ -0.16
IFT20-216ENST00000588477 MTTPP55157 894 aa14.04□□□□□ -0.16
IFT20-216ENST00000588477 ID2Q02363 134 aa14.04□□□□□ -0.16
IFT20-216ENST00000588477 SERTAD2Q14140 314 aa14.04□□□□□ -0.16
IFT20-216ENST00000588477 RCN2Q14257 317 aa14.04□□□□□ -0.16
IFT20-216ENST00000588477 SLBPQ14493 270 aaKnown RBP eCLIP14.04□□□□□ -0.16
IFT20-216ENST00000588477 CRYMQ14894 314 aa14.04□□□□□ -0.16
IFT20-216ENST00000588477 PPP1R3AQ16821 1122 aa14.04□□□□□ -0.16
IFT20-216ENST00000588477 SLCO4C1Q6ZQN7 724 aa14.04□□□□□ -0.16
IFT20-216ENST00000588477 FAM13CQ8NE31 585 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms