RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 MYO1GB0I1T2 1018 aa10.69□□□□□ -0.7
LIG3-204ENST00000585740 hCG_2039718K7EN88 272 aa10.69□□□□□ -0.7
LIG3-204ENST00000585740 KIR2DS3K7RE56 304 aa10.69□□□□□ -0.7
LIG3-204ENST00000585740 ERI3O43414 337 aaKnown RBP10.69□□□□□ -0.7
LIG3-204ENST00000585740 TNFSF14O43557 240 aa10.69□□□□□ -0.7
LIG3-204ENST00000585740 AHCYL1O43865 530 aa10.69□□□□□ -0.7
LIG3-204ENST00000585740 SH3BP5O60239 455 aa10.69□□□□□ -0.7
LIG3-204ENST00000585740 VIPP01282 170 aa10.69□□□□□ -0.7
LIG3-204ENST00000585740 C1QCP02747 245 aa10.69□□□□□ -0.7
LIG3-204ENST00000585740 IGFBP5P24593 272 aa10.69□□□□□ -0.7
LIG3-204ENST00000585740 ATP5A1P25705 553 aaKnown RBP10.69□□□□□ -0.7
LIG3-204ENST00000585740 HLCSP50747 726 aa10.69□□□□□ -0.7
LIG3-204ENST00000585740 IST1P53990 364 aa10.69□□□□□ -0.7
LIG3-204ENST00000585740 PCBP3P57721 371 aaKnown RBP10.69□□□□□ -0.7
LIG3-204ENST00000585740 GABARAPL2P60520 117 aa10.69□□□□□ -0.7
LIG3-204ENST00000585740 VLDLRP98155 873 aa10.69□□□□□ -0.7
LIG3-204ENST00000585740 RELAQ04206 551 aa10.69□□□□□ -0.7
LIG3-204ENST00000585740 HYAL2Q12891 473 aa10.69□□□□□ -0.7
LIG3-204ENST00000585740 SLAMF1Q13291 335 aa10.69□□□□□ -0.7
LIG3-204ENST00000585740 TDGQ13569 410 aa10.69□□□□□ -0.7
LIG3-204ENST00000585740 KIR2DS5Q14953 304 aa10.69□□□□□ -0.7
LIG3-204ENST00000585740 C16orf72Q14CZ0 275 aa10.69□□□□□ -0.7
LIG3-204ENST00000585740 PLCL1Q15111 1095 aa10.69□□□□□ -0.7
LIG3-204ENST00000585740 KIAA1614Q5VZ46 1190 aa10.69□□□□□ -0.7
LIG3-204ENST00000585740 SLC30A9Q6PML9 568 aa10.69□□□□□ -0.7
LIG3-204ENST00000585740 TMEM64Q6YI46 380 aa10.69□□□□□ -0.7
LIG3-204ENST00000585740 SYT13Q7L8C5 426 aa10.69□□□□□ -0.7
LIG3-204ENST00000585740 C6orf120Q7Z4R8 191 aa10.69□□□□□ -0.7
LIG3-204ENST00000585740 VTCN1Q7Z7D3 282 aa10.69□□□□□ -0.7
LIG3-204ENST00000585740 TMEM179BQ7Z7N9 219 aa10.69□□□□□ -0.7
LIG3-204ENST00000585740 ASPGQ86U10 573 aa10.69□□□□□ -0.7
LIG3-204ENST00000585740 PLD3Q8IV08 490 aa10.69□□□□□ -0.7
LIG3-204ENST00000585740 RBM12BQ8IXT5 1001 aaKnown RBP10.69□□□□□ -0.7
LIG3-204ENST00000585740 FBXL6Q8N531 539 aa10.69□□□□□ -0.7
LIG3-204ENST00000585740 SPPL2AQ8TCT8 520 aa10.69□□□□□ -0.7
LIG3-204ENST00000585740 GPBAR1Q8TDU6 330 aa10.69□□□□□ -0.7
LIG3-204ENST00000585740 RASSF5Q8WWW0 418 aa10.69□□□□□ -0.7
LIG3-204ENST00000585740 NCSTNQ92542 709 aa10.69□□□□□ -0.7
LIG3-204ENST00000585740 SLC35G5Q96KT7 338 aa10.69□□□□□ -0.7
LIG3-204ENST00000585740 C7orf34Q96L11 122 aa10.69□□□□□ -0.7
LIG3-204ENST00000585740 TEFMQ96QE5 360 aaKnown RBP10.69□□□□□ -0.7
LIG3-204ENST00000585740 BBS4Q96RK4 519 aa10.69□□□□□ -0.7
LIG3-204ENST00000585740 MBOAT4Q96T53 435 aa10.69□□□□□ -0.7
LIG3-204ENST00000585740 C17orf62Q9BQA9 187 aa10.69□□□□□ -0.7
LIG3-204ENST00000585740 TMEM168Q9H0V1 697 aa10.69□□□□□ -0.7
LIG3-204ENST00000585740 VCX3AQ9NNX9 186 aa10.69□□□□□ -0.7
LIG3-204ENST00000585740 SLC35C2Q9NQQ7 365 aa10.69□□□□□ -0.7
LIG3-204ENST00000585740 PRDM9Q9NQV7 894 aa10.69□□□□□ -0.7
LIG3-204ENST00000585740 PRDM7Q9NQW5 492 aa10.69□□□□□ -0.7
LIG3-204ENST00000585740 KIF17Q9P2E2 1029 aa10.69□□□□□ -0.7
LIG3-204ENST00000585740 EBF1Q9UH73 591 aa10.69□□□□□ -0.7
LIG3-204ENST00000585740 ACSL6Q9UKU0 697 aa10.69□□□□□ -0.7
LIG3-204ENST00000585740 PSME2Q9UL46 239 aa10.69□□□□□ -0.7
LIG3-204ENST00000585740 ENTPD4Q9Y227 616 aa10.69□□□□□ -0.7
LIG3-204ENST00000585740 CA5BQ9Y2D0 317 aa10.69□□□□□ -0.7
LIG3-204ENST00000585740 ASB4Q9Y574 426 aa10.69□□□□□ -0.7
LIG3-204ENST00000585740 SNX8Q9Y5X2 465 aa10.69□□□□□ -0.7
LIG3-204ENST00000585740 ARHGEF17Q96PE2 2063 aaPredicted RBP10.69□□□□□ -0.7
LIG3-204ENST00000585740 MYOCOSA0A1B0GUC4 107 aa10.68□□□□□ -0.7
LIG3-204ENST00000585740 LOC100130705A0A1B0GUX0 176 aa10.68□□□□□ -0.7
LIG3-204ENST00000585740 OR2A25A4D2G3 310 aa10.68□□□□□ -0.7
LIG3-204ENST00000585740 SHISA7A6NL88 538 aa10.68□□□□□ -0.7
LIG3-204ENST00000585740 A8MVJ9 347 aa10.68□□□□□ -0.7
LIG3-204ENST00000585740 H0Y8X5 98 aa10.68□□□□□ -0.7
LIG3-204ENST00000585740 M0QX08 132 aa10.68□□□□□ -0.7
LIG3-204ENST00000585740 VILLO15195 856 aa10.68□□□□□ -0.7
LIG3-204ENST00000585740 ZNF217O75362 1048 aa10.68□□□□□ -0.7
LIG3-204ENST00000585740 SEC24DO94855 1032 aaPredicted RBP10.68□□□□□ -0.7
LIG3-204ENST00000585740 IGHV4-34P06331 123 aa10.68□□□□□ -0.7
LIG3-204ENST00000585740 FESP07332 822 aa10.68□□□□□ -0.7
LIG3-204ENST00000585740 SLC35G6P0C7Q6 338 aa10.68□□□□□ -0.7
LIG3-204ENST00000585740 NELFEP18615 380 aaKnown RBP10.68□□□□□ -0.7
LIG3-204ENST00000585740 ZNF10P21506 573 aaPredicted RBP10.68□□□□□ -0.7
LIG3-204ENST00000585740 PAX7P23759 505 aa10.68□□□□□ -0.7
LIG3-204ENST00000585740 RYKP34925 604 aa10.68□□□□□ -0.7
LIG3-204ENST00000585740 GPC1P35052 558 aa10.68□□□□□ -0.7
LIG3-204ENST00000585740 CCT3P49368 545 aaKnown RBP10.68□□□□□ -0.7
LIG3-204ENST00000585740 KHKP50053 298 aa10.68□□□□□ -0.7
LIG3-204ENST00000585740 BLKP51451 505 aa10.68□□□□□ -0.7
LIG3-204ENST00000585740 KCNAB2Q13303 367 aa10.68□□□□□ -0.7
LIG3-204ENST00000585740 KEAP1Q14145 624 aa10.68□□□□□ -0.7
LIG3-204ENST00000585740 GNA13Q14344 377 aa10.68□□□□□ -0.7
LIG3-204ENST00000585740 TPRG1LQ5T0D9 272 aa10.68□□□□□ -0.7
LIG3-204ENST00000585740 NDUFAF5Q5TEU4 345 aa10.68□□□□□ -0.7
LIG3-204ENST00000585740 ZNF691Q5VV52 312 aa10.68□□□□□ -0.7
LIG3-204ENST00000585740 KDM4DQ6B0I6 523 aa10.68□□□□□ -0.7
LIG3-204ENST00000585740 CEACAM20Q6UY09 585 aa10.68□□□□□ -0.7
LIG3-204ENST00000585740 ZNF793Q6ZN11 406 aa10.68□□□□□ -0.7
LIG3-204ENST00000585740 RBM44Q6ZP01 1051 aaKnown RBP10.68□□□□□ -0.7
LIG3-204ENST00000585740 SAMD14Q8IZD0 417 aaPredicted RBP10.68□□□□□ -0.7
LIG3-204ENST00000585740 OFCC1Q8IZS5 231 aa10.68□□□□□ -0.7
LIG3-204ENST00000585740 MMP21Q8N119 569 aa10.68□□□□□ -0.7
LIG3-204ENST00000585740 ACOT4Q8N9L9 421 aa10.68□□□□□ -0.7
LIG3-204ENST00000585740 AVL9Q8NBF6 648 aa10.68□□□□□ -0.7
LIG3-204ENST00000585740 PIK3C3Q8NEB9 887 aa10.68□□□□□ -0.7
LIG3-204ENST00000585740 OR10Q1Q8NGQ4 319 aa10.68□□□□□ -0.7
LIG3-204ENST00000585740 OR5AK3PQ8NH89 298 aa10.68□□□□□ -0.7
LIG3-204ENST00000585740 ATOH1Q92858 354 aaPredicted RBP10.68□□□□□ -0.7
LIG3-204ENST00000585740 MAL2Q969L2 176 aa10.68□□□□□ -0.7
LIG3-204ENST00000585740 MUS81Q96NY9 551 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms