RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 TTTY10Q9BZA0 68 aa10.77□□□□□ -0.69
TOP3A-217ENST00000584582 ZDHHC5Q9C0B5 715 aa10.77□□□□□ -0.69
TOP3A-217ENST00000584582 CXorf36Q9H7Y0 433 aa10.77□□□□□ -0.69
TOP3A-217ENST00000584582 SLC52A3Q9NQ40 469 aa10.77□□□□□ -0.69
TOP3A-217ENST00000584582 C8orf4Q9NR00 106 aa10.77□□□□□ -0.69
TOP3A-217ENST00000584582 POM121BA6NF01 834 aa10.77□□□□□ -0.69
TOP3A-217ENST00000584582 CPN2P22792 545 aa10.77□□□□□ -0.69
TOP3A-217ENST00000584582 NOS3P29474 1203 aa10.77□□□□□ -0.69
TOP3A-217ENST00000584582 DBPQ10586 325 aaPredicted RBP10.77□□□□□ -0.69
TOP3A-217ENST00000584582 RGS21Q2M5E4 152 aa10.77□□□□□ -0.69
TOP3A-217ENST00000584582 KIAA1211LQ6NV74 962 aa10.77□□□□□ -0.69
TOP3A-217ENST00000584582 C8orf82Q6P1X6 216 aaPredicted RBP10.77□□□□□ -0.69
TOP3A-217ENST00000584582 KLHDC8AQ8IYD2 350 aa10.77□□□□□ -0.69
TOP3A-217ENST00000584582 HORMAD2Q8N7B1 307 aa10.77□□□□□ -0.69
TOP3A-217ENST00000584582 POC5Q8NA72 575 aa10.77□□□□□ -0.69
TOP3A-217ENST00000584582 FAM46DQ8NEK8 389 aa10.77□□□□□ -0.69
TOP3A-217ENST00000584582 OR2L2Q8NH16 312 aa10.77□□□□□ -0.69
TOP3A-217ENST00000584582 PATE1Q8WXA2 126 aa10.77□□□□□ -0.69
TOP3A-217ENST00000584582 FGF14Q92915 247 aa10.77□□□□□ -0.69
TOP3A-217ENST00000584582 NIPSNAP1Q9BPW8 284 aa10.77□□□□□ -0.69
TOP3A-217ENST00000584582 OR51I1Q9H343 314 aa10.77□□□□□ -0.69
TOP3A-217ENST00000584582 HMG20AQ9NP66 347 aa10.77□□□□□ -0.69
TOP3A-217ENST00000584582 GPR52Q9Y2T5 361 aa10.77□□□□□ -0.69
TOP3A-217ENST00000584582 RWDD3Q9Y3V2 267 aa10.77□□□□□ -0.69
TOP3A-217ENST00000584582 PTPRZ1P23471 2315 aaPredicted RBP10.76□□□□□ -0.69
TOP3A-217ENST00000584582 CHD5Q8TDI0 1954 aa10.76□□□□□ -0.69
TOP3A-217ENST00000584582 H0YIV9 168 aa10.76□□□□□ -0.69
TOP3A-217ENST00000584582 OR10H2O60403 315 aa10.76□□□□□ -0.69
TOP3A-217ENST00000584582 PRAMEF10O60809 474 aa10.76□□□□□ -0.69
TOP3A-217ENST00000584582 BCAS1O75363 584 aaPredicted RBP10.76□□□□□ -0.69
TOP3A-217ENST00000584582 IFNA16P05015 189 aa10.76□□□□□ -0.69
TOP3A-217ENST00000584582 MNX1P50219 401 aaPredicted RBP10.76□□□□□ -0.69
TOP3A-217ENST00000584582 SPCS2Q15005 226 aa10.76□□□□□ -0.69
TOP3A-217ENST00000584582 CRB2Q5IJ48 1285 aa10.76□□□□□ -0.69
TOP3A-217ENST00000584582 SLC15A4Q8N697 577 aa10.76□□□□□ -0.69
TOP3A-217ENST00000584582 AMER3Q8N944 861 aa10.76□□□□□ -0.69
TOP3A-217ENST00000584582 DNAJB8Q8NHS0 232 aa10.76□□□□□ -0.69
TOP3A-217ENST00000584582 MYDGFQ969H8 173 aa10.76□□□□□ -0.69
TOP3A-217ENST00000584582 ZNF707Q96C28 371 aaPredicted RBP10.76□□□□□ -0.69
TOP3A-217ENST00000584582 CNPPD1Q9BV87 410 aa10.76□□□□□ -0.69
TOP3A-217ENST00000584582 SFXN1Q9H9B4 322 aa10.76□□□□□ -0.69
TOP3A-217ENST00000584582 ABCB9Q9NP78 766 aa10.76□□□□□ -0.69
TOP3A-217ENST00000584582 ZNF236Q9UL36 1845 aa10.76□□□□□ -0.69
TOP3A-217ENST00000584582 B4DGG1 531 aa10.76□□□□□ -0.69
TOP3A-217ENST00000584582 VEGFDO43915 354 aa10.76□□□□□ -0.69
TOP3A-217ENST00000584582 LCMT2O60294 686 aaKnown RBP10.76□□□□□ -0.69
TOP3A-217ENST00000584582 PRSS23O95084 383 aa10.76□□□□□ -0.69
TOP3A-217ENST00000584582 CMPK1P30085 196 aa10.76□□□□□ -0.69
TOP3A-217ENST00000584582 RPS6KA3P51812 740 aa10.76□□□□□ -0.69
TOP3A-217ENST00000584582 ADARB1P78563 741 aaKnown RBP10.76□□□□□ -0.69
TOP3A-217ENST00000584582 MAP4K2Q12851 820 aa10.76□□□□□ -0.69
TOP3A-217ENST00000584582 EIF4HQ15056 248 aaKnown RBP10.76□□□□□ -0.69
TOP3A-217ENST00000584582 PRRT3Q5FWE3 981 aa10.76□□□□□ -0.69
TOP3A-217ENST00000584582 B3GNT8Q7Z7M8 397 aa10.76□□□□□ -0.69
TOP3A-217ENST00000584582 RIMKLAQ8IXN7 391 aa10.76□□□□□ -0.69
TOP3A-217ENST00000584582 GEMIN6Q8WXD5 167 aaKnown RBP10.76□□□□□ -0.69
TOP3A-217ENST00000584582 CAMK1GQ96NX5 476 aa10.76□□□□□ -0.69
TOP3A-217ENST00000584582 SOHLH2Q9NX45 425 aa10.76□□□□□ -0.69
TOP3A-217ENST00000584582 ERGIC3Q9Y282 383 aa10.76□□□□□ -0.69
TOP3A-217ENST00000584582 SPAG17Q6Q759 2223 aa10.76□□□□□ -0.69
TOP3A-217ENST00000584582 PLPP1O14494 284 aa10.76□□□□□ -0.69
TOP3A-217ENST00000584582 GPR37L1O60883 481 aa10.76□□□□□ -0.69
TOP3A-217ENST00000584582 BMXP51813 675 aa10.76□□□□□ -0.69
TOP3A-217ENST00000584582 SELENOWP63302 87 aa10.76□□□□□ -0.69
TOP3A-217ENST00000584582 SLC35F1Q5T1Q4 408 aa10.76□□□□□ -0.69
TOP3A-217ENST00000584582 SHQ1Q6PI26 577 aaKnown RBP10.76□□□□□ -0.69
TOP3A-217ENST00000584582 SERPINA11Q86U17 422 aa10.76□□□□□ -0.69
TOP3A-217ENST00000584582 SLC9B2Q86UD5 537 aa10.76□□□□□ -0.69
TOP3A-217ENST00000584582 GOLM1Q8NBJ4 401 aa10.76□□□□□ -0.69
TOP3A-217ENST00000584582 OR52E1Q8NGJ3 308 aa10.76□□□□□ -0.69
TOP3A-217ENST00000584582 OR56A3Q8NH54 315 aa10.76□□□□□ -0.69
TOP3A-217ENST00000584582 WDR20Q8TBZ3 569 aa10.76□□□□□ -0.69
TOP3A-217ENST00000584582 ZFP90Q8TF47 636 aa10.76□□□□□ -0.69
TOP3A-217ENST00000584582 RERGQ96A58 199 aaPredicted RBP10.76□□□□□ -0.69
TOP3A-217ENST00000584582 TAMM41Q96BW9 452 aa10.76□□□□□ -0.69
TOP3A-217ENST00000584582 C1GALT1C1Q96EU7 318 aa10.76□□□□□ -0.69
TOP3A-217ENST00000584582 C16orf58Q96GQ5 468 aa10.76□□□□□ -0.69
TOP3A-217ENST00000584582 MBOAT4Q96T53 435 aa10.76□□□□□ -0.69
TOP3A-217ENST00000584582 TPSD1Q9BZJ3 242 aa10.76□□□□□ -0.69
TOP3A-217ENST00000584582 KLHL31Q9H511 634 aa10.76□□□□□ -0.69
TOP3A-217ENST00000584582 EHD3Q9NZN3 535 aa10.76□□□□□ -0.69
TOP3A-217ENST00000584582 EIF3FO00303 357 aaPredicted RBP10.75□□□□□ -0.69
TOP3A-217ENST00000584582 TFECO14948 347 aaPredicted RBP10.75□□□□□ -0.69
TOP3A-217ENST00000584582 SERPINB1P30740 379 aa10.75□□□□□ -0.69
TOP3A-217ENST00000584582 CNR2P34972 360 aa10.75□□□□□ -0.69
TOP3A-217ENST00000584582 KRT20P35900 424 aa10.75□□□□□ -0.69
TOP3A-217ENST00000584582 GSTM5P46439 218 aa10.75□□□□□ -0.69
TOP3A-217ENST00000584582 ILF3Q12906 894 aaKnown RBP eCLIP10.75□□□□□ -0.694e-6■■■□□ 17.2
TOP3A-217ENST00000584582 CCDC157Q569K6 752 aa10.75□□□□□ -0.69
TOP3A-217ENST00000584582 ARMCX4Q5H9R4 360 aa10.75□□□□□ -0.69
TOP3A-217ENST00000584582 C18orf63Q68DL7 685 aa10.75□□□□□ -0.69
TOP3A-217ENST00000584582 KIAA1161Q6NSJ0 714 aa10.75□□□□□ -0.69
TOP3A-217ENST00000584582 PLEKHM3Q6ZWE6 761 aa10.75□□□□□ -0.69
TOP3A-217ENST00000584582 PDZD3Q86UT5 571 aa10.75□□□□□ -0.69
TOP3A-217ENST00000584582 PTOV1Q86YD1 416 aa10.75□□□□□ -0.69
TOP3A-217ENST00000584582 DEPDC4Q8N2C3 294 aa10.75□□□□□ -0.69
TOP3A-217ENST00000584582 ZFP41Q8N8Y5 198 aa10.75□□□□□ -0.69
TOP3A-217ENST00000584582 GAB3Q8WWW8 586 aa10.75□□□□□ -0.69
TOP3A-217ENST00000584582 DNASE1L2Q92874 299 aa10.75□□□□□ -0.69
TOP3A-217ENST00000584582 BORCS5Q969J3 196 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms