RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 SUPT7LO94864 414 aa14.63□□□□□ -0.07
SKA2-209ENST00000583976 SP1P08047 785 aa14.63□□□□□ -0.07
SKA2-209ENST00000583976 RPS17P08708 135 aaKnown RBP14.63□□□□□ -0.07
SKA2-209ENST00000583976 CPA3P15088 417 aa14.63□□□□□ -0.07
SKA2-209ENST00000583976 CD22P20273 847 aa14.63□□□□□ -0.07
SKA2-209ENST00000583976 MAOAP21397 527 aa14.63□□□□□ -0.07
SKA2-209ENST00000583976 PTGER1P34995 402 aa14.63□□□□□ -0.07
SKA2-209ENST00000583976 RFC3P40938 356 aa14.63□□□□□ -0.07
SKA2-209ENST00000583976 SCTRP47872 440 aa14.63□□□□□ -0.07
SKA2-209ENST00000583976 TAS2R50P59544 299 aa14.63□□□□□ -0.07
SKA2-209ENST00000583976 HERVK_113P63132 956 aa14.63□□□□□ -0.07
SKA2-209ENST00000583976 BTG2P78543 158 aa14.63□□□□□ -0.07
SKA2-209ENST00000583976 ACTN3Q08043 901 aaPredicted RBP14.63□□□□□ -0.07
SKA2-209ENST00000583976 UNC50Q53HI1 259 aa14.63□□□□□ -0.07
SKA2-209ENST00000583976 ZNF678Q5SXM1 525 aa14.63□□□□□ -0.07
SKA2-209ENST00000583976 XKRXQ6PP77 449 aa14.63□□□□□ -0.07
SKA2-209ENST00000583976 HDXQ7Z353 690 aa14.63□□□□□ -0.07
SKA2-209ENST00000583976 SLC22A9Q8IVM8 553 aa14.63□□□□□ -0.07
SKA2-209ENST00000583976 KRT78Q8N1N4 520 aa14.63□□□□□ -0.07
SKA2-209ENST00000583976 TMEM178AQ8NBL3 297 aa14.63□□□□□ -0.07
SKA2-209ENST00000583976 PLPP5Q8NEB5 264 aa14.63□□□□□ -0.07
SKA2-209ENST00000583976 TBC1D20Q96BZ9 403 aa14.63□□□□□ -0.07
SKA2-209ENST00000583976 MTFMTQ96DP5 389 aaKnown RBP14.63□□□□□ -0.07
SKA2-209ENST00000583976 PTCD3Q96EY7 689 aaKnown RBP14.63□□□□□ -0.07
SKA2-209ENST00000583976 PGM2Q96G03 612 aa14.63□□□□□ -0.07
SKA2-209ENST00000583976 FAM111AQ96PZ2 611 aa14.63□□□□□ -0.07
SKA2-209ENST00000583976 CDK15Q96Q40 435 aa14.63□□□□□ -0.07
SKA2-209ENST00000583976 TMEM237Q96Q45 408 aa14.63□□□□□ -0.07
SKA2-209ENST00000583976 ERVK-6Q9BXR3 956 aa14.63□□□□□ -0.07
SKA2-209ENST00000583976 ACTR8Q9H981 624 aa14.63□□□□□ -0.07
SKA2-209ENST00000583976 ZBTB26Q9HCK0 441 aa14.63□□□□□ -0.07
SKA2-209ENST00000583976 SEMA4BQ9NPR2 832 aaPredicted RBP14.63□□□□□ -0.07
SKA2-209ENST00000583976 MKS1Q9NXB0 559 aa14.63□□□□□ -0.07
SKA2-209ENST00000583976 SENP1Q9P0U3 644 aa14.63□□□□□ -0.07
SKA2-209ENST00000583976 ITGB1BP2Q9UKP3 347 aa14.63□□□□□ -0.07
SKA2-209ENST00000583976 PPP6CO00743 305 aa14.62□□□□□ -0.07
SKA2-209ENST00000583976 OR7A17O14581 309 aa14.62□□□□□ -0.07
SKA2-209ENST00000583976 CHST10O43529 356 aa14.62□□□□□ -0.07
SKA2-209ENST00000583976 NME2P1O60361 137 aa14.62□□□□□ -0.07
SKA2-209ENST00000583976 ABOP16442 354 aa14.62□□□□□ -0.07
SKA2-209ENST00000583976 ZNF24P17028 368 aa14.62□□□□□ -0.07
SKA2-209ENST00000583976 ALOX12P18054 663 aa14.62□□□□□ -0.07
SKA2-209ENST00000583976 IMPDH1P20839 514 aa14.62□□□□□ -0.07
SKA2-209ENST00000583976 NME2P22392 152 aa14.62□□□□□ -0.07
SKA2-209ENST00000583976 HNF4AP41235 474 aa14.62□□□□□ -0.07
SKA2-209ENST00000583976 PIK3CGP48736 1102 aa14.62□□□□□ -0.07
SKA2-209ENST00000583976 CCNG1P51959 295 aa14.62□□□□□ -0.07
SKA2-209ENST00000583976 PRKAA2P54646 552 aa14.62□□□□□ -0.07
SKA2-209ENST00000583976 HERC3Q15034 1050 aa14.62□□□□□ -0.07
SKA2-209ENST00000583976 MAPKAPK3Q16644 382 aa14.62□□□□□ -0.07
SKA2-209ENST00000583976 TNFAIP8L3Q5GJ75 292 aa14.62□□□□□ -0.07
SKA2-209ENST00000583976 METTL2BQ6P1Q9 378 aaKnown RBP14.62□□□□□ -0.07
SKA2-209ENST00000583976 TMIGD1Q6UXZ0 262 aa14.62□□□□□ -0.07
SKA2-209ENST00000583976 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.62□□□□□ -0.07
SKA2-209ENST00000583976 CCNYL1Q8N7R7 359 aa14.62□□□□□ -0.07
SKA2-209ENST00000583976 OR52B6Q8NGF0 335 aa14.62□□□□□ -0.07
SKA2-209ENST00000583976 ELP5Q8TE02 316 aa14.62□□□□□ -0.07
SKA2-209ENST00000583976 TRPC4APQ8TEL6 797 aa14.62□□□□□ -0.07
SKA2-209ENST00000583976 ZNF483Q8TF39 744 aaPredicted RBP14.62□□□□□ -0.07
SKA2-209ENST00000583976 CCT6BQ92526 530 aa14.62□□□□□ -0.07
SKA2-209ENST00000583976 EFCAB11Q9BUY7 163 aa14.62□□□□□ -0.07
SKA2-209ENST00000583976 SARGQ9BW04 601 aa14.62□□□□□ -0.07
SKA2-209ENST00000583976 AICDAQ9GZX7 198 aa14.62□□□□□ -0.07
SKA2-209ENST00000583976 EHD1Q9H4M9 534 aa14.62□□□□□ -0.07
SKA2-209ENST00000583976 TMBIM4Q9HC24 238 aa14.62□□□□□ -0.07
SKA2-209ENST00000583976 KCNK9Q9NPC2 374 aa14.62□□□□□ -0.07
SKA2-209ENST00000583976 ZFP69BQ9UJL9 534 aa14.62□□□□□ -0.07
SKA2-209ENST00000583976 ZNF490Q9ULM2 529 aaPredicted RBP14.62□□□□□ -0.07
SKA2-209ENST00000583976 SAGE2PA6NJ88 616 aa14.61□□□□□ -0.07
SKA2-209ENST00000583976 ADAM10O14672 748 aa14.61□□□□□ -0.07
SKA2-209ENST00000583976 ASNA1O43681 348 aa14.61□□□□□ -0.07
SKA2-209ENST00000583976 TYROBPO43914 113 aa14.61□□□□□ -0.07
SKA2-209ENST00000583976 CLDN14O95500 239 aa14.61□□□□□ -0.07
SKA2-209ENST00000583976 PCNAP12004 261 aa14.61□□□□□ -0.07
SKA2-209ENST00000583976 AHRP35869 848 aa14.61□□□□□ -0.07
SKA2-209ENST00000583976 NR0B1P51843 470 aaKnown RBP14.61□□□□□ -0.07
SKA2-209ENST00000583976 SMSP52788 366 aa14.61□□□□□ -0.07
SKA2-209ENST00000583976 RAB8AP61006 207 aa14.61□□□□□ -0.07
SKA2-209ENST00000583976 CLCQ05315 142 aa14.61□□□□□ -0.07
SKA2-209ENST00000583976 GTF3C1Q12789 2109 aa14.61□□□□□ -0.07
SKA2-209ENST00000583976 LAPTM5Q13571 262 aa14.61□□□□□ -0.07
SKA2-209ENST00000583976 HIST2H2ACQ16777 129 aaPredicted RBP14.61□□□□□ -0.07
SKA2-209ENST00000583976 PAGE2BQ5JRK9 111 aa14.61□□□□□ -0.07
SKA2-209ENST00000583976 HIST2H2AA3Q6FI13 130 aa14.61□□□□□ -0.07
SKA2-209ENST00000583976 ADNP2Q6IQ32 1131 aa14.61□□□□□ -0.07
SKA2-209ENST00000583976 SLC25A25Q6KCM7 469 aa14.61□□□□□ -0.07
SKA2-209ENST00000583976 RPS19BP1Q86WX3 136 aaKnown RBP14.61□□□□□ -0.07
SKA2-209ENST00000583976 C10orf107Q8IVU9 208 aa14.61□□□□□ -0.07
SKA2-209ENST00000583976 LGI4Q8N135 537 aa14.61□□□□□ -0.07
SKA2-209ENST00000583976 RDH11Q8TC12 318 aa14.61□□□□□ -0.07
SKA2-209ENST00000583976 CCDC126Q96EE4 140 aa14.61□□□□□ -0.07
SKA2-209ENST00000583976 WDR34Q96EX3 536 aa14.61□□□□□ -0.07
SKA2-209ENST00000583976 RHBGQ9H310 441 aa14.61□□□□□ -0.07
SKA2-209ENST00000583976 NECTIN3Q9NQS3 549 aa14.61□□□□□ -0.07
SKA2-209ENST00000583976 RNF11Q9Y3C5 154 aa14.61□□□□□ -0.07
SKA2-209ENST00000583976 IGKV3D-11A0A0A0MRZ8 115 aa14.6□□□□□ -0.07
SKA2-209ENST00000583976 ANKDD1BA6NHY2 528 aa14.6□□□□□ -0.07
SKA2-209ENST00000583976 A8MUA0 341 aa14.6□□□□□ -0.07
SKA2-209ENST00000583976 CLDN9O95484 217 aa14.6□□□□□ -0.07
SKA2-209ENST00000583976 AGAP20933 346 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms