RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 NT5CQ8TCD5 201 aa6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 ZPLD1Q8TCW7 415 aa6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 PTPMT1Q8WUK0 201 aaPredicted RBP6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 INTS12Q96CB8 462 aaKnown RBP6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 ZC3HAV1LQ96H79 300 aaKnown RBP6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 MRFAP1L1Q96HT8 127 aa6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 JSRP1Q96MG2 331 aaPredicted RBP6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 PPP1R2P1Q96PQ5 205 aa6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 TUBA1CQ9BQE3 449 aa6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 MED18Q9BUE0 208 aa6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 FAM129AQ9BZQ8 928 aa6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 SPNS1Q9H2V7 528 aa6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 UBQLN3Q9H347 655 aa6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 PIGMQ9H3S5 423 aa6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 GOLPH3Q9H4A6 298 aa6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 KLHL31Q9H511 634 aa6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 ESRP2Q9H6T0 727 aaKnown RBP6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 ADAP2Q9NPF8 381 aa6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 FAM114A2Q9NRY5 505 aa6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 CHMP5Q9NZZ3 219 aa6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 CNOT11Q9UKZ1 510 aaKnown RBP6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 DTX4Q9Y2E6 619 aa6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 CHCHD2Q9Y6H1 151 aaPredicted RBP6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 LRRC14BA6NHZ5 514 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 GFYI3L273 518 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 KLF4O43474 513 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 PSTPIP1O43586 416 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 SPOPO43791 374 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 NDUFS7O75251 213 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 IGHV4-39P01824 125 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 HPNP05981 417 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 PGRP06401 933 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 THBDP07204 575 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 ADRA1DP25100 572 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 FMO4P31512 558 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 PPARGP37231 505 aaPredicted RBP6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 CD79BP40259 229 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 HNF4AP41235 474 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 SLC1A1P43005 524 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 CDK9P50750 372 aaKnown RBP6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 NAGLUP54802 743 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 PRAMEP78395 509 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 OCRLQ01968 901 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 ASPHQ12797 758 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 BMPR2Q13873 1038 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 RUNX2Q13950 521 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 NR1I3Q14994 352 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 SF3B4Q15427 424 aaKnown RBP eCLIP6.98□□□□□ -1.295e-11■■□□□ 13.3
SMARCE1-217ENST00000580654 ELAVL1Q15717 326 aaKnown RBP6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 ETFDHQ16134 617 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 SLC18A3Q16572 532 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 TMEM249Q2WGJ8 235 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 FAM174BQ3ZCQ3 159 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 EIPR1Q53HC9 387 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 PIGGQ5H8A4 983 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 AARS2Q5JTZ9 985 aaKnown RBP6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 FNDC7Q5VTL7 733 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 HIST2H2BDQ6DRA6 164 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 DARS2Q6PI48 645 aaKnown RBP6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 CYHR1Q6ZMK1 362 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 SH2D5Q6ZV89 423 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 IL17RELQ6ZVW7 336 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 BTLAQ7Z6A9 289 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 KIAA1328Q86T90 577 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 LRRC6Q86X45 466 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 KRTAP19-1Q8IUB9 90 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 RCOR2Q8IZ40 523 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 PPHLN1Q8NEY8 458 aaKnown RBP6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 OR10G3Q8NGC4 313 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 OR4K1Q8NGD4 311 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 OR8K1Q8NGG5 319 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 OR8K3Q8NH51 312 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 GIMAP7Q8NHV1 300 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 ASB11Q8WXH4 323 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 LPGAT1Q92604 370 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 KRT35Q92764 455 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 LRRC45Q96CN5 670 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 C1orf159Q96HA4 380 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 LCORQ96JN0 433 aaPredicted RBP6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 ART5Q96L15 291 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 ZFP3Q96NJ6 502 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 PANX2Q96RD6 677 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 G6PC3Q9BUM1 346 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 RBSNQ9H1K0 784 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 CLK4Q9HAZ1 481 aaKnown RBP6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 CCDC177Q9NQR7 707 aaPredicted RBP6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 PRTFDC1Q9NRG1 225 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 HOMER3Q9NSC5 361 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 LPAR3Q9UBY5 353 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 PACSIN3Q9UKS6 424 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 LAMP3Q9UQV4 416 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 TCAF1Q9Y4C2 921 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 PRKDCP78527 4128 aaKnown RBP6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 EXPH5Q8NEV8 1989 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 MALRD1Q5VYJ5 2156 aa6.98□□□□□ -1.29
SMARCE1-217ENST00000580654 A0A1W2PNV4 684 aa6.97□□□□□ -1.29
SMARCE1-217ENST00000580654 PSMD12O00232 456 aaPredicted RBP6.97□□□□□ -1.29
SMARCE1-217ENST00000580654 HS3ST1O14792 307 aa6.97□□□□□ -1.29
SMARCE1-217ENST00000580654 OR1F1O43749 312 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms