RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 REP15Q6BDI9 236 aa1.7□□□□□ -2.14
TOP2A-202ENST00000577541 TMEM64Q6YI46 380 aa1.7□□□□□ -2.14
TOP2A-202ENST00000577541 RFPL4BQ6ZWI9 263 aa1.7□□□□□ -2.14
TOP2A-202ENST00000577541 Q7L0L9 218 aa1.7□□□□□ -2.14
TOP2A-202ENST00000577541 SPATA19Q7Z5L4 167 aa1.7□□□□□ -2.14
TOP2A-202ENST00000577541 ZNF713Q8N859 430 aaPredicted RBP1.7□□□□□ -2.14
TOP2A-202ENST00000577541 NAT8LQ8N9F0 302 aa1.7□□□□□ -2.14
TOP2A-202ENST00000577541 UXS1Q8NBZ7 420 aa1.7□□□□□ -2.14
TOP2A-202ENST00000577541 PCNPQ8WW12 178 aaKnown RBP1.7□□□□□ -2.14
TOP2A-202ENST00000577541 SMPDL3AQ92484 453 aa1.7□□□□□ -2.14
TOP2A-202ENST00000577541 RIT1Q92963 219 aa1.7□□□□□ -2.14
TOP2A-202ENST00000577541 MGME1Q9BQP7 344 aa1.7□□□□□ -2.14
TOP2A-202ENST00000577541 TEX13BQ9BXU2 312 aa1.7□□□□□ -2.14
TOP2A-202ENST00000577541 EDEM3Q9BZQ6 932 aa1.7□□□□□ -2.14
TOP2A-202ENST00000577541 GRPEL1Q9HAV7 217 aa1.7□□□□□ -2.14
TOP2A-202ENST00000577541 C3orf14Q9HBI5 128 aa1.7□□□□□ -2.14
TOP2A-202ENST00000577541 AMBNQ9NP70 447 aa1.7□□□□□ -2.14
TOP2A-202ENST00000577541 GPR173Q9NS66 373 aa1.7□□□□□ -2.14
TOP2A-202ENST00000577541 CUTCQ9NTM9 273 aa1.7□□□□□ -2.14
TOP2A-202ENST00000577541 CWC25Q9NXE8 425 aaPredicted RBP1.7□□□□□ -2.14
TOP2A-202ENST00000577541 CRCT1Q9UGL9 99 aa1.7□□□□□ -2.14
TOP2A-202ENST00000577541 ANAPC5Q9UJX4 755 aa1.7□□□□□ -2.14
TOP2A-202ENST00000577541 ZNF346Q9UL40 294 aaKnown RBP1.7□□□□□ -2.14
TOP2A-202ENST00000577541 PCDHGA1Q9Y5H4 931 aa1.7□□□□□ -2.14
TOP2A-202ENST00000577541 CPQQ9Y646 472 aa1.7□□□□□ -2.14
TOP2A-202ENST00000577541 FAM205AQ6ZU69 1335 aa1.69□□□□□ -2.14
TOP2A-202ENST00000577541 ANKDD1BA6NHY2 528 aa1.69□□□□□ -2.14
TOP2A-202ENST00000577541 H0Y9J4 135 aa1.69□□□□□ -2.14
TOP2A-202ENST00000577541 SLC30A4O14863 429 aa1.69□□□□□ -2.14
TOP2A-202ENST00000577541 HAT1O14929 419 aa1.69□□□□□ -2.14
TOP2A-202ENST00000577541 HDAC3O15379 428 aa1.69□□□□□ -2.14
TOP2A-202ENST00000577541 ACSL4O60488 711 aa1.69□□□□□ -2.14
TOP2A-202ENST00000577541 CLN5O75503 358 aa1.69□□□□□ -2.14
TOP2A-202ENST00000577541 PIGRP01833 764 aa1.69□□□□□ -2.14
TOP2A-202ENST00000577541 FHP07954 510 aa1.69□□□□□ -2.14
TOP2A-202ENST00000577541 CCDC159P0C7I6 412 aa1.69□□□□□ -2.14
TOP2A-202ENST00000577541 UMPSP11172 480 aa1.69□□□□□ -2.14
TOP2A-202ENST00000577541 SKILP12757 684 aa1.69□□□□□ -2.14
TOP2A-202ENST00000577541 SCG2P13521 617 aa1.69□□□□□ -2.14
TOP2A-202ENST00000577541 EEF2P13639 858 aaKnown RBP1.69□□□□□ -2.14
TOP2A-202ENST00000577541 ACKR3P25106 362 aa1.69□□□□□ -2.14
TOP2A-202ENST00000577541 RGRP47804 291 aa1.69□□□□□ -2.14
TOP2A-202ENST00000577541 RPS27AP62979 156 aaKnown RBP1.69□□□□□ -2.14
TOP2A-202ENST00000577541 RBP5P82980 135 aa1.69□□□□□ -2.14
TOP2A-202ENST00000577541 CETN1Q12798 172 aa1.69□□□□□ -2.14
TOP2A-202ENST00000577541 CEACAM7Q14002 265 aa1.69□□□□□ -2.14
TOP2A-202ENST00000577541 PODNL1Q6PEZ8 512 aa1.69□□□□□ -2.14
TOP2A-202ENST00000577541 Q71RC1 249 aaPredicted RBP1.69□□□□□ -2.14
TOP2A-202ENST00000577541 THNSL1Q8IYQ7 743 aa1.69□□□□□ -2.14
TOP2A-202ENST00000577541 SIX6OS1Q8N1H7 587 aa1.69□□□□□ -2.14
TOP2A-202ENST00000577541 ELMOD1Q8N336 334 aa1.69□□□□□ -2.14
TOP2A-202ENST00000577541 SFRP1Q8N474 314 aa1.69□□□□□ -2.14
TOP2A-202ENST00000577541 ZNF525Q8N782 197 aa1.69□□□□□ -2.14
TOP2A-202ENST00000577541 RNF149Q8NC42 400 aa1.69□□□□□ -2.14
TOP2A-202ENST00000577541 TRAF3IP1Q8TDR0 691 aaPredicted RBP1.69□□□□□ -2.14
TOP2A-202ENST00000577541 BPIFA2Q96DR5 249 aa1.69□□□□□ -2.14
TOP2A-202ENST00000577541 ZIM3Q96PE6 472 aa1.69□□□□□ -2.14
TOP2A-202ENST00000577541 SIGLEC12Q96PQ1 595 aa1.69□□□□□ -2.14
TOP2A-202ENST00000577541 THUMPD3Q9BV44 507 aaKnown RBP1.69□□□□□ -2.14
TOP2A-202ENST00000577541 PLEKHA3Q9HB20 300 aa1.69□□□□□ -2.14
TOP2A-202ENST00000577541 S100A14Q9HCY8 104 aa1.69□□□□□ -2.14
TOP2A-202ENST00000577541 MRPL17Q9NRX2 175 aaKnown RBP1.69□□□□□ -2.14
TOP2A-202ENST00000577541 ZNF446Q9NWS9 450 aa1.69□□□□□ -2.14
TOP2A-202ENST00000577541 SLCO1C1Q9NYB5 712 aa1.69□□□□□ -2.14
TOP2A-202ENST00000577541 MGAT4AQ9UM21 535 aa1.69□□□□□ -2.14
TOP2A-202ENST00000577541 PLEKHA6Q9Y2H5 1048 aa1.69□□□□□ -2.14
TOP2A-202ENST00000577541 HBS1LQ9Y450 684 aaKnown RBP1.69□□□□□ -2.14
TOP2A-202ENST00000577541 POMT1Q9Y6A1 747 aa1.69□□□□□ -2.14
TOP2A-202ENST00000577541 A0A0A6YYC8 382 aaPredicted RBP1.68□□□□□ -2.14
TOP2A-202ENST00000577541 TEX48A0A1B0GUV7 120 aa1.68□□□□□ -2.14
TOP2A-202ENST00000577541 SMIM30A4D0T7 59 aa1.68□□□□□ -2.14
TOP2A-202ENST00000577541 ZSCAN5CA6NGD5 496 aaPredicted RBP1.68□□□□□ -2.14
TOP2A-202ENST00000577541 ZNF487B1APH4 448 aa1.68□□□□□ -2.14
TOP2A-202ENST00000577541 E7ENQ6 273 aa1.68□□□□□ -2.14
TOP2A-202ENST00000577541 H0Y626 953 aa1.68□□□□□ -2.14
TOP2A-202ENST00000577541 I3L1I5 382 aaPredicted RBP1.68□□□□□ -2.14
TOP2A-202ENST00000577541 IGHG3P01860 377 aa1.68□□□□□ -2.14
TOP2A-202ENST00000577541 RPN1P04843 607 aaKnown RBP1.68□□□□□ -2.14
TOP2A-202ENST00000577541 CCR4P51679 360 aa1.68□□□□□ -2.14
TOP2A-202ENST00000577541 YBEYP58557 167 aaPredicted RBP1.68□□□□□ -2.14
TOP2A-202ENST00000577541 ERVPABLB-1P60509 514 aa1.68□□□□□ -2.14
TOP2A-202ENST00000577541 MEF2DQ14814 521 aa1.68□□□□□ -2.14
TOP2A-202ENST00000577541 PSMD6Q15008 389 aa1.68□□□□□ -2.14
TOP2A-202ENST00000577541 NHSL2Q5HYW2 709 aa1.68□□□□□ -2.14
TOP2A-202ENST00000577541 SLC10A5Q5PT55 438 aa1.68□□□□□ -2.14
TOP2A-202ENST00000577541 WDR25Q64LD2 544 aaPredicted RBP1.68□□□□□ -2.14
TOP2A-202ENST00000577541 C17orf107Q6ZR85 190 aa1.68□□□□□ -2.14
TOP2A-202ENST00000577541 CYP4V2Q6ZWL3 525 aaPredicted RBP1.68□□□□□ -2.14
TOP2A-202ENST00000577541 OTOAQ7RTW8 1153 aa1.68□□□□□ -2.14
TOP2A-202ENST00000577541 SNX32Q86XE0 403 aa1.68□□□□□ -2.14
TOP2A-202ENST00000577541 CACUL1Q86Y37 369 aa1.68□□□□□ -2.14
TOP2A-202ENST00000577541 CCDC71Q8IV32 467 aaPredicted RBP1.68□□□□□ -2.14
TOP2A-202ENST00000577541 C4orf19Q8IY42 314 aa1.68□□□□□ -2.14
TOP2A-202ENST00000577541 CARNMT1Q8N4J0 409 aa1.68□□□□□ -2.14
TOP2A-202ENST00000577541 ZNF491Q8N8L2 437 aa1.68□□□□□ -2.14
TOP2A-202ENST00000577541 OR13C5Q8NGS8 318 aa1.68□□□□□ -2.14
TOP2A-202ENST00000577541 FIBINQ8TAL6 211 aa1.68□□□□□ -2.14
TOP2A-202ENST00000577541 PTP4A1Q93096 173 aa1.68□□□□□ -2.14
TOP2A-202ENST00000577541 PHYHIPLQ96FC7 376 aa1.68□□□□□ -2.14
TOP2A-202ENST00000577541 PPP1R16AQ96I34 528 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms